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LIPID COMPOSITION ATLAS
Protein Classification
Types
(3 types)
Classes
(11 classes)
Superfamilies
(393 superfamilies)
Families
(668 families)
Species
(539 species)
Localization
(24 types)
All proteins in OPM
(2185 proteins)
Protein Links
PDB Sum
,
PDB
,
OCA
,
MPKS
,
PDBTM
,
MPDB
,
CGDB
Membrane Protein Lipid Composition Atlas
1.
Archaebacterial membrane
(56 proteins)
2.
Bacterial Gram-negative inner membrane
(274 proteins)
3.
Bacterial Gram-negative outer membrane
(137 proteins)
4.
Bacterial Gram-positive outer membrane
(7 proteins)
5.
Bacterial Gram-positive plasma membrane
(81 proteins)
6.
Chloroplast inner membrane
(1 protein)
7.
Chloroplast outer membrane (0 proteins)
8.
Cytoplasmic granule membrane
(1 protein)
9.
Endoplasmic reticulum membrane
(125 proteins)
10.
Endosome membrane
(35 proteins)
11.
Eukaryotic plasma membrane
(483 proteins)
12.
Golgi membrane
(22 proteins)
13.
Lysosome membrane
(17 proteins)
14.
Mitochondrial inner membrane
(51 proteins)
15.
Mitochondrial outer membrane
(20 proteins)
16.
Nuclear inner membrane
(3 proteins)
17.
Nuclear outer membrane
(5 proteins)
18.
Peroxisome membrane
(10 proteins)
19.
Secreted
(681 proteins)
20.
Thylakoid membrane
(31 proteins)
21.
Undefined
(75 proteins)
22.
Vacuole membrane
(17 proteins)
23.
Vesicle membrane
(13 proteins)
24.
Viral membrane
(40 proteins)
Lipid Composition in Endosome membrane
Endosome membrane
1dvp » Hepatocyte growth factor-regulated tyrosine kinase substrate (Hrs)
3.0 ± 0.0 Å
1h6h » PX domain of NADH oxidase (p40phox), ligand-bound
3.9 ± 2.0 Å
1hyi » Early endosome antigen 1 (EEA1), monomer
3.0 ± 2.0 Å
1o7k » PX domain of NADH oxidase (p47phox), ligand-bound
15.2 ± 1.7 Å
1kq6 » PX domain of NADH oxidase (p47phox), ligand-free, longer chain
2.4 ± 1.6 Å
1ocu » PX domain of sorting nexin GRD19, ligand-bound
15.3 ± 0.8 Å
1ocs » PX domain of sorting nexin GRD19, ligand-free
2.5 ± 1.1 Å
1em2 » Lipid transport protein Mln64 (StARD3)
2.0 ± 1.1 Å
1joc » Early endosome antigen 1 (EEA1), model of dimer with lipids
15.0 ± 0.4 Å
1xte » PX domain of serine/threonine-protein kinase Sgk3
1.2 ± 1.4 Å
1z2q » LM-5 FYVE domain
1.5 ± 1.5 Å
3d59 » vitellogenin
5.5 ± 1.2 Å
3fog » PX domain of sorting nexin-17 (SNX17)
3.4 ± 1.0 Å
1fw5 » Non-structural polyprotein, membrane-bound domain
7.9 ± 1.5 Å
2yw8 » RUN and FYVE domain-containing protein 1
0.7 ± 3.4 Å
3hpc » Sorting nexin-5
0.0 ± 2.1 Å
2v14 » Sorting nexin-23 (Kinesin-like protein KIF16B)
3.3 ± 3.0 Å
3p0c » Nischarin
4.1 ± 0.5 Å
2ari » Fusion peptide (512-541) of protein gp41
10.0 ± 1.0 Å
2h18 » ADP-ribosylation factor-like protein 8A
1.2 ± 3.6 Å
3tfm » Myosin X
1.5 ± 2.6 Å
1jau » Juxtamembrane peptide (665-683) of protein gp41
4.0 ± 4.2 Å
1p5a » Fusion peptide (517-539) of protein gp41
25.8 ± 5.5 Å
2knu » Juxtamembrane peptide of hepatis C virus E1 glycoprotein (314-342)
5.3 ± 0.9 Å
2pjv » Fusion peptide (510-532) of protein gp41
8.7 ± 3.8 Å
2pv6 » Juxtamembrane peptide (662-683) of protein gp41
6.7 ± 0.6 Å
2kzq » Juxtamembrane peptide (684-719) of protein gp41
4.3 ± 3.3 Å
1szi » Perilipin-3
2.4 ± 2.3 Å
3tow » Multivesicular body subunit 12B
4.5 ± 2.3 Å
1vg8 » Ras-related protein Rab-7a
1.7 ± 0.5 Å
2qpt » EH domain-containing protein 2
4.5 ± 2.1 Å
2lqy » Peptide of envelope glycoprotein H (625-644)
3.2 ± 0.8 Å
1mn8 » Matrix protein p15
1.5 ± 1.8 Å
1hek » Matrix protein p15
1.0 ± 2.8 Å
2rsw » Fusion peptide from E1 envelope glycoprotein
8.3 ± 0.6 Å
Endosome membrane
Nat Rev Mol Cell Biol. 2008 Feb;9(2):112-24. Membrane lipids: where they are and how they behave.
Copyright © 2005-2013
Andrei Lomize
,
Mikhail Lomize
and
Irina Pogozheva
University of Michigan, Ann Arbor, MI 48109 USA