PDB ID or protein name

Membrane Protein Lipid Composition Atlas

1. Archaebacterial membrane (54 proteins)
2. Bacterial Gram-negative inner membrane (269 proteins)
3. Bacterial Gram-negative outer membrane (136 proteins)
4. Bacterial Gram-positive outer membrane (7 proteins)
5. Bacterial Gram-positive plasma membrane (81 proteins)
6. Chloroplast inner membrane (1 protein)
7. Chloroplast outer membrane (0 proteins)
8. Cytoplasmic granule membrane (1 protein)
9. Endoplasmic reticulum membrane (125 proteins)
10. Endosome membrane (35 proteins)
11. Eukaryotic plasma membrane (479 proteins)
12. Golgi membrane (22 proteins)
13. Lysosome membrane (17 proteins)
14. Mitochondrial inner membrane (51 proteins)
15. Mitochondrial outer membrane (20 proteins)
16. Nuclear inner membrane (3 proteins)
17. Nuclear outer membrane (5 proteins)
18. Peroxisome membrane (10 proteins)
19. Secreted (681 proteins)
20. Thylakoid membrane (31 proteins)
21. Undefined (75 proteins)
22. Vacuole membrane (16 proteins)
23. Vesicle membrane (13 proteins)
24. Viral membrane (40 proteins)

Lipid Composition in Vacuole membrane

Cell/Species PC % PE % PI % PS % PA % CL % Sph % Ch % CB % SL % PI+PS % PI+LPE % LPC % PG %
Barley Roots
Hordeum vulgare
53.6 23.0 - 2.9 1.9 0.6 - - - - - 3.2 6.0
Budding Yeast
Saccharomyces cerevisiae
46.5 19.4 18.3 4.4 2.1 1.6 - - - - - - - -

Vacuole membrane

corner lipidlipidlipidlipidlipidlipidlipidlipidlipidlipidlipidlipidlipidlipidlipidlipidlipidlipidlipidlipidlipidlipidlipidlipid corner
lipidlipidlipidlipidlipidlipidlipidlipidlipidlipidlipidlipidlipidlipidlipidlipidlipidlipidlipidlipidlipidlipidlipidlipid
1vfy » FYVE domain of Vps27 protein 1vfy » FYVE domain of Vps27 protein
3.7 ± 1.8 Å
spacer 1qqe » Vesicular transport protein sec17
5.2 ± 6.1 Å
1qqe » Vesicular transport protein sec17
lipid
lipid
  spacer   lipid
lipid
1qdm » Phytepsin 1qdm » Phytepsin
9.9 ± 1.1 Å
spacer 1qs8 » Plasmepsin IV
9.1 ± 1.5 Å
1qs8 » Plasmepsin IV
lipid
lipid
  spacer   lipid
lipid
1vtp » Proteinase inhibitor, vacuolar targeting peptide (372-397) 1vtp » Proteinase inhibitor, vacuolar targeting peptide (372-397)
3.5 ± 1.1 Å
spacer 1kmd » PX domain of vacuolar morphogenesis protein VAM7
3.4 ± 1.2 Å
1kmd » PX domain of vacuolar morphogenesis protein VAM7
lipid
lipid
  spacer   lipid
lipid
3l0m » DrrA protein, PtdIns(4) binding domain, from different strain 3l0m » DrrA protein, PtdIns(4) binding domain, from different strain
3.7 ± 4.2 Å
spacer 3dan » Plant cytochrome P450 74A (allene oxide synthase)
7.5 ± 0.4 Å
3dan » Plant cytochrome P450 74A (allene oxide synthase)
lipid
lipid
  spacer   lipid
lipid
3n6o » DrrA protein, PtdIns(4) binding domain 3n6o » DrrA protein, PtdIns(4) binding domain
5.1 ± 1.4 Å
spacer 2kit » Serine/threonine-protein kinase TOR1, FATC domain
6.3 ± 1.0 Å
2kit » Serine/threonine-protein kinase TOR1, FATC domain
lipid
lipid
  spacer   lipid
lipid
2jtw » V-type proton ATPase subunit a, vacuolar isoform, TMH 7 2jtw » V-type proton ATPase subunit a, vacuolar isoform, TMH 7
20.8 ± 6.5 Å
spacer 1fq5 » Saccharopepsin
3.8 ± 0.8 Å
1fq5 » Saccharopepsin
lipid
lipid
  spacer   lipid
lipid
1lf2 » Plasmepsin-2 1lf2 » Plasmepsin-2
6.2 ± 0.4 Å
spacer 4a01 » Proton-translocating pyrophosphatase
32.0 ± 0.8 Å
4a01 » Proton-translocating pyrophosphatase
lipid
lipid
  spacer   lipid
lipid
3kl4 » Signal recognition 54 kDa protein 3kl4 » Signal recognition 54 kDa protein
9.7 ± 0.5 Å
spacer 4fyg » SidF, inhibitor of growth family, member 3
8.1 ± 3.3 Å
4fyg » SidF, inhibitor of growth family, member 3
corner Vacuole membrane corner
Membrane Lipid Composition
Nat Rev Mol Cell Biol. 2008 Feb;9(2):112-24. Membrane lipids: where they are and how they behave.