PDB ID or protein name

Families

1.1.01.01. Microbial and algal rhodopsins (20 proteins) 3.E.1 (TCDB) PF01036, PDBsum
1.1.01.02. G-protein coupled receptors, family A (47 proteins) 9.A.14 (TCDB) PF00001, PDBsum
1.1.01.03. GPCR Secretin (B) family (1 protein) 9.A.14 (TCDB) PF00002, PDBsum
1.1.01.04. Frizzled/Smoothened family (1 protein) 9.A.14 (TCDB) PF01534, PDBsum
1.1.02.01. Photosynthetic reaction centers from bacteria (5 proteins) 3.E.2 (TCDB) PF00124, PDBsum
1.1.02.02. Photosystem I (3 proteins) 5.B.4 (TCDB) PF00223, PDBsum
1.1.02.03. Photosystem II (4 proteins) 3.E.2 (TCDB) PF00421, PDBsum
1.1.03.01. Light-harvesting complexes from bacteria (6 proteins) PF00556, PDBsum
1.1.03.02. Light-harvesting complexes from chloroplasts (3 proteins) 5.B.4 (TCDB) PF00504, PDBsum
1.1.04.01. H+ or Na+ translocating NADH Dehydrogenas (2 proteins) 3.D.1 (TCDB) PF00361, PDBsum
1.1.05.01. Polysulfide reductase (2 proteins) 5.A.3 (TCDB) PF03916, PDBsum
1.1.05.02. Formate dehydrogenase (1 protein) 5.A.3 (TCDB) PF00033, PDBsum
1.1.05.03. Respiratory nitrate reductase (1 protein) 5.A.3 (TCDB) PF02665, PDBsum
1.1.05.04. Fumarate reductase/mitochondrial respiratory complex (II) (4 proteins) PF01127, PDBsum
1.1.05.05. Succinate dehydrogenase/fumarate reductase (2 proteins) PF02300, PDBsum
1.1.05.06. Prokaryotic cytochrome b561 (1 protein) PF01292, PDBsum
1.1.06.01. Cytochrome bc1 and b6f complexes (14 proteins) 3.D.3 (TCDB) PF00033, PDBsum
1.1.07.01. Cytochrome c oxidases (10 proteins) 3.D.4 (TCDB) PF00115, PDBsum
1.1.08.01. V-type and F-type ATPases (16 proteins) 3.A.2 (TCDB) PF00137, PDBsum
1.1.09.01. P-ATPase (35 proteins) 3.A.3 (TCDB) PF00122, PDBsum
1.1.10.01. FecCD transport family (6 proteins) 3.A.1.14 (TCDB) PF01032, PDBsum
1.1.10.02. Binding-protein-dependent transport system (9 proteins) 3.A.1.1 (TCDB) PF00528, PDBsum
1.1.10.03. Lipid/drug exporters (4 proteins) 3.A.1.106 (TCDB) PF00664, PDBsum
1.1.10.04. Multidrug resistance exporter (MDR) (2 proteins) 3.A.1.201 (TCDB) PF00664, PDBsum
1.1.10.05. Mitochondrial peptide exporter family (ABCB) (4 proteins) 3.A.1.212 (TCDB) PF00664, PDBsum
1.1.11.01. Protein translocase (12 proteins) 3.A.5 (TCDB) PF00344, PDBsum
1.1.12.01. Voltage-gated ion channels (36 proteins) 1.A.1 (TCDB) PF07885, PDBsum
1.1.12.02. Inward rectifier potassium channels (12 proteins) 1.A.2 (TCDB) PF01007, PDBsum
1.1.12.03. Potassium transporter (Trk) (3 proteins) 2.A.38 (TCDB) PF02386, PDBsum
1.1.13.01. Acid-sensing ion channels (2 proteins) 1.A.6 (TCDB) PF00858, PDBsum
1.1.13.02. ATP-gated cation channel (2 proteins) 1.A.7 (TCDB) PF00864, PDBsum
1.1.14.01. Major intrinsic protein (MIP) family (20 proteins) 1.A.8 (TCDB) PF00230, PDBsum
1.1.14.02. Formate/Nitrite transporter (FNT) family (5 proteins) 2.A.44 (TCDB) PF01226, PDBsum
1.1.15.01. Ligand-gated ion channel of neurotransmitter receptors (7 proteins) 1.A.9 (TCDB) PF02932, PDBsum
1.1.15.02. Prokaryotic pentameric ligand-gated ion channels (6 proteins) 1.A.9 (TCDB) PF02932, PDBsum
1.1.16.01. Glutamate-gated Ion Channel (GIC) family (1 protein) 1.A.10 (TCDB) PF00060, PDBsum
1.1.17.01. Ammonia transporter Amt (5 proteins) 1.A.11 (TCDB) PF00909, PDBsum
1.1.17.02. Urea transporter (2 proteins) 1.A.28 (TCDB) PF03253, PDBsum
1.1.18.01. Large conductance mechanosensitive ion channel (MscL) (2 proteins) 1.A.22 (TCDB) PF01741, PDBsum
1.1.19.01. Small conductance mechanosensitive ion channel (MscS) (5 proteins) 1.A.23 (TCDB) PF00924, PDBsum
1.1.20.01. Connexin (1 protein) 1.A.24 (TCDB) PF00029, PDBsum
1.1.21.01. CorA metal ion transporters (MIT) (5 proteins) 1.A.35 (TCDB) PF01544, PDBsum
1.1.22.01. Pore-forming haemolysin E (1 protein) 1.C.10 (TCDB) PF06109, PDBsum
1.1.25.01. Glycerol-3-phosphate transporter (1 protein) 2.A.1.4 (TCDB) PF07690, PDBsum
1.1.25.02. LacY-like proton/sugar symporter (5 proteins) 2.A.1.5 (TCDB) PF01306, PDBsum
1.1.25.03. Drug/proton antiporter (1 protein) 2.A.1.2 (TCDB) PF07690, PDBsum
1.1.25.04. Fucose-proton symporter (1 protein) 2.A.1.7 (TCDB) PF07690, PDBsum
1.1.25.05. Proton-dependent oligopeptide transporter (POT) (1 protein) 2.A.17 (TCDB) PF00854, PDBsum
1.1.25.06. Sugar porter family (4 proteins) 2.A.1.1 (TCDB) PF00083, PDBsum
1.1.25.07. Nitrate/nitrite porter (2 proteins) PF07690 (TCDB) 2.A.1.8, PDBsum
1.1.26.01. Neurotransmitter: sodium symporter (4 proteins) 2.A.22 (TCDB) PF00209, PDBsum
1.1.26.02. Nucleobase-cation symporter 1 (3 proteins) 2.A.39 (TCDB) PF02133, PDBsum
1.1.26.03. Solute:sodium symporter (2 proteins) 2.A.21 (TCDB) PF00474, PDBsum
1.1.26.04. Betaine/carnitine/choline transporters (7 proteins) 2.A.15 (TCDB) PF02028, PDBsum
1.1.26.05. Amino acid-Polyamine-Organocation (APC) family (6 proteins) 2.A.3 (TCDB) PF00324, PDBsum
1.1.26.06. Nucleobase:Cation Symporter-2 (1 protein) 2.A.40 (TCDB) PF00860, PDBsum
1.1.27.01. Bacterial zinc transporters (3 proteins) 2.A.4.1 (TCDB) PF01545, PDBsum
1.1.28.01. Hydrophobe/amphiphile efflux-1 family (6 proteins) 2.A.6.2 (TCDB) PF00873, PDBsum
1.1.28.02. Heavy metal efflux family (4 proteins) 2.A.6.1 (TCDB) PF00873, PDBsum
1.1.28.03. SecDF protein-export membrane protein (1 protein) PF02355, PDBsum
1.1.29.01. Small Multidrug Resistance (SMR) (0 proteins) 2.A.7.1 (TCDB) PF00893, PDBsum
1.1.30.01. OxaA/YidC (1 protein) 2.A.9 (TCDB)
1.1.31.01. Tellurite-resistance/Dicarboxylate transporter (1 protein) 2.A.16 (TCDB) PF03595, PDBsum
1.1.32.01. Proton glutamate symport protein (4 proteins) 2.A.23 (TCDB) PF00375, PDBsum
1.1.33.02. Bile Acid:Na+ Symporter (BASS) Family (1 protein) 2.A.28 (TCDB) PF01758, PDBsum
1.1.34.01. ADP/ATP carrier (3 proteins) 2.A.29 (TCDB) PF00153, PDBsum
1.1.35.01. Sodium/Proton antiporter 1 (2 proteins) 2.A.33 (TCDB) PF06965, PDBsum
1.1.36.01. Chloride transporter (4 proteins) 2.A.49 (TCDB) PF00654, PDBsum
1.1.38.01. Multi antimicrobial extrusion (MATE) family (5 proteins) 2.A.66.1 (TCDB) PF01554, PDBsum
1.1.39.01. Prokaryotic riboflavin transporter (1 protein) 2.A.87 (TCDB) PF07155, PDBsum
1.1.39.02. Vitamin uptake transporter (2 proteins) 2.A.88 (TCDB) PF09515, PDBsum
1.1.39.03. Energy-coupling factor transporter (2 proteins)
1.1.41.01. Magnesium ion transporter-E (MgtE) (1 protein) 9.A.19 (TCDB) PF03448, PDBsum
1.1.43.01. Phosphotransferase Glucose-Glucoside (Glc) Family (1 protein) 4.A.1 (TCDB) PF02378, PDBsum
1.1.44.01. Disulfide bond oxidoreductase-B (DsbB) (7 proteins) 5.A.2 (TCDB) PF02600, PDBsum
1.1.46.01. MerF Mercuric ion uptake family (1 protein) 1.A.72 (TCDB) PF11431, PDBsum
1.1.47.01. Signal transduction histidine kinase (3 proteins) 9.B.33 (TCDB) PF13493, PDBsum
1.1.48.01. Putative sulfate transporter (CysZ) (1 protein) 9.B.7 (TCDB)
1.1.49.01. ATPase family associated with various cellular activities (AAA) (2 proteins) PF00004, PDBsum
1.1.50.01. Methane monooxygenase (4 proteins) PF02461, PDBsum
1.1.51.01. Vitamin K epoxide reductase (1 protein) PF07884, PDBsum
1.1.52.01. Oligosaccharyltransferase (1 protein) PF02516, PDBsum
1.1.53.01. Isoprenylcysteine carboxyl methyltransferase (ICMT) (1 protein) PF04140, PDBsum
1.1.54.01. Prokaryotic diacylglycerol kinase (2 proteins) PF01219, PDBsum
1.1.55.01. LPS O-antigen chain length determinant protein (1 protein) PF02706, PDBsum
1.1.56.01. Sulfatase (3 proteins) PF00884, PDBsum
1.1.57.01. Type IV leader peptidase (1 protein) PF01478, PDBsum
1.1.57.02. Presenilin (1 protein) 1.A.54 (TCDB) PF01080, PDBsum
1.1.58.01. Site-2 protease (1 protein) PF02163, PDBsum
1.1.59.01. ClpP protease (3 proteins) PF00574, PDBsum
1.1.60.01. Rhomboid proteases (8 proteins) 9.B.104 (TCDB) PF01694, PDBsum
1.1.61.01. MAPEG domain (5 proteins) PF01124, PDBsum
1.1.62.01. Transmembrane protein containing HAMP domain (1 protein) PF00672, PDBsum
1.1.63.01. Peptidase S26 (4 proteins) PF10502, PDBsum
1.1.64.01. Sodium/calcium exchanger (3 proteins) 2.A.19 (TCDB) PF01699, PDBsum
1.1.65.01. Concentrative nucleoside transporter (1 protein) 2.A.41 (TCDB) PF07662, PDBsum
1.1.66.01. Proton-translocating pyrophosphatase (3 proteins) 3.A.10 (TCDB) PF03030, PDBsum
1.1.67.01. Transmembrane proteins 14 (2 proteins) PF03647, PDBsum
1.1.68.01. Transmembrane protein 141 (1 protein)
1.1.69.01. Hypoxia induced protein (2 proteins) PF04588, PDBsum
1.1.70.01. Peptidase family M48 (2 proteins) PF01435, PDBsum
1.1.71.01. Bacterial phosphoinositide phosphatase (1 protein)
1.1.72.01. Divalent anion:Na+ symporter (DASS) family (1 protein) 2.A.47 (TCDB) PF00939, PDBsum
1.1.73.01. Bacterial conjugation TrbI-like (2 proteins) 3.A.7 (TCDB) PF03743, PDBsum
1.1.74.01. Calcium release-activated calcium (CRAC) channel (1 protein) 1.A.52 (TCDB) PF07856, PDBsum
1.1.75.01. TatC (1 protein) 2.A.64 (TCDB) PF00902, PDBsum
1.1.75.02. TatA (3 proteins) 2.A.64 (TCDB) PF02416, PDBsum
1.1.76.01. Urea/amide channel (1 protein) 1.A.29 (TCDB) PF02293, PDBsum
1.1.77.01. Cellulose-conducting channel (1 protein)
1.1.78.01. Nogo receptors (1 protein) PF02453, PDBsum
1.2.01.01. Protein tyrosine kinases (15 proteins) PF07714, PDBsum
1.2.02.01. T-cell surface glycoprotein CD3 zeta chain (1 protein) PF11628, PDBsum
1.2.03.01. T-cell surface glycoprotein CD4 (1 protein) PF12104, PDBsum
1.2.03.02. T-cell immunoglobulin and mucin domain-containing (TIM) protein (8 proteins)
1.2.03.03. Myelin protein (2 proteins) PF10570, PDBsum
1.2.03.04. Leukocyte immuniglobulin-like receptor (1 protein)
1.2.03.05. Type I cytokine receptor (1 protein) PF09067, PDBsum
1.2.03.06. Cadherin (0 proteins) PF00028, PDBsum
1.2.03.07. Netrin receptor family (2 proteins)
1.2.04.01. Integrin (12 proteins) PF08725, PDBsum
1.2.05.01. Leucine rich repeat-containing transmembrane proteins (2 proteins) PF00560, PDBsum
1.2.06.01. Tumour necrosis factor (2 proteins) PF00229, PDBsum
1.2.07.01. Protein jagged (2 proteins) PF00008, PDBsum
1.2.08.01. TYROBP (2 proteins)
1.2.09.01. Stannin (1 protein) PF09049, PDBsum
1.2.10.01. Glycophorin (1 protein) PF01102, PDBsum
1.2.11.01. Major coat protein, symmetry class I (3 proteins) PF05371, PDBsum
1.2.11.02. Major coat protein, symmetry class II (6 proteins)
1.2.12.01. Pilin (4 proteins) PF00114, PDBsum
1.2.13.01. PufX (1 protein) PF11511, PDBsum
1.2.14.01. TGF-beta receptor type III (1 protein) PF00100, PDBsum
1.2.15.02. Srx domain of the signal recognition particle receptor alpha-subunit (1 protein) 3.A.5 (TCDB) PF09201, PDBsum
1.2.16.01. Pulmonary surfactant-associated protein (1 protein) PF08999, PDBsum
1.2.17.01. SNARE complex (4 proteins) 1.F.1 (TCDB) PF00835, PDBsum
1.2.17.02. Synatpobrevin (2 proteins) PF00957, PDBsum
1.2.17.03. Syntaxin (1 protein) PF00804, PDBsum
1.2.18.01. Sortase (2 proteins) PF04203, PDBsum
1.2.19.01. Tom20 family (2 proteins) 3.A.8 (TCDB) PF02064, PDBsum
1.2.20.01. Mycobacterial protein Rv1761c (1 protein)
1.2.21.01. BNip3 (BCL2/Adenovirus E1B-interacting protein 3) (3 proteins) 1.A.20 (TCDB) PF06553, PDBsum
1.2.22.01. Amidase signature (AS) enzymes (1 protein) PF01425, PDBsum
1.2.22.01. Bcl-2 inhibitors of programmed cell death (4 proteins) 1.A.21 (TCDB) PF00452, PDBsum
1.2.23.01. Influenza virus matrix protein 2 (10 proteins) 1.A.19 (TCDB) PF00599, PDBsum
1.2.24.01. Vpu protein (3 proteins) 1.A.40 (TCDB) PF00558, PDBsum
1.2.25.01. Calcium ATPase regulators (6 proteins) 1.A.50 (TCDB) PF04272, PDBsum
1.2.25.02. FXYD regulators (2 proteins) 1.A.27 (TCDB) PF02038, PDBsum
1.2.26.01. OMA polysaccharide transporter (2 proteins) 1.B.18 (TCDB) PF02563, PDBsum
1.2.27.01. Fst toxin (1 protein) 1.C.64 (TCDB) PF13955, PDBsum
1.2.30.01. Voltage-gated K+ channel accessory protein (MinK) (1 protein) 8.A.10 (TCDB) PF02060, PDBsum
1.2.31.01. Cytochrome c of nitrite reductase (1 protein) PF03264, PDBsum
1.2.32.01. Cytochrome P450 (49 proteins) PF00067, PDBsum
1.2.33.02. Flavin containing amine oxidoreductase (8 proteins) PF01593, PDBsum
1.2.34.01. Oligosaccharidetransferase (2 proteins) PF10215, PDBsum
1.2.36.01. Haemagglutinin-neuraminidase (1 protein) PF00423, PDBsum
1.2.37.01. ADP-ribosyl cyclase (1 protein) PF02267, PDBsum
1.2.38.01. Transglycosylase of penicillin-binding proteins (Glycosyltransferase family 51) (5 proteins) PF00912, PDBsum
1.2.38.02. Phage lysozyme (1 protein) PF00959, PDBsum
1.2.38.03. Transglycosylase SLT domain (1 protein) PF01464, PDBsum
1.2.39.01. Peptidase family M1 (3 proteins) PF01433, PDBsum
1.2.39.02. Matrixin (1 protein) PF00413, PDBsum
1.2.39.03. Mammalian disintegrin-metalloprotease (1 protein) PF00200, PDBsum
1.2.40.01. Mitochondrial fission 1 protein family (1 protein)
1.2.41.01. Acyl CoA binding protein (3 proteins) PF00887, PDBsum
1.2.42.01. Calcineurin-like phosphoesterase (1 protein) PF00149, PDBsum
1.2.43.01. Viral glycoprotein (6 proteins) PF00869, PDBsum
1.2.43.02. Alphavirus E1 glycoprotein (1 protein) PF01589, PDBsum
1.2.43.03. Herpesvirus glycoprotein B (1 protein) PF00606, PDBsum
1.2.43.04. Rhabdovirus spike glycoprotein (1 protein) PF00974, PDBsum
1.2.43.05. Baculovirus gp64 envelope glycoprotein (1 protein) PF03273, PDBsum
1.2.43.06. Spike receptor binding domain (1 protein) PF09408, PDBsum
1.2.44.01. Amyloid beta A4 protein (4 proteins) 1.C.50 (TCDB) PF03494, PDBsum
1.3.01.01. OmpA family (4 proteins) PF01389, PDBsum
1.3.01.02. Enterobacterial Ail/Lom protein (3 proteins) PF06316, PDBsum
1.3.02.01. Opacity porins (2 proteins) PF02462, PDBsum
1.3.03.01. Outer membrane protein W (OmpW) family (2 proteins) 1.B.39 (TCDB) PF03922, PDBsum
1.3.04.03. Lipid A acylation (2 proteins) PF07017, PDBsum
1.3.05.01. Lipid A 3-O-deacylase (PagL) (1 protein) PF09411, PDBsum
1.3.06.01. Major OMP from thermophilic eubacteria (1 protein)
1.3.07.01. OM protease omptin, OMPT (3 proteins) PF01278, PDBsum
1.3.08.01. OM adhesion protein OpcA (2 proteins) PF07239, PDBsum
1.3.09.01. Lipid A deacylase (1 protein) PF09982, PDBsum
1.3.10.01. Oligogalactoronate-specific porin (KdgM) (1 protein) 1.B.35. (TCDB) PF06178, PDBsum
1.3.11.01. Autotransporters of N-terminal passenger domain (7 proteins) 1.B.12 (TCDB) PF03797, PDBsum
1.3.11.02. Autotransporter-3 (2 proteins) 1.B.54 (TCDB) PF11924, PDBsum
1.3.12.01. OM phospholipase A, OmpLA (2 proteins) PF02253, PDBsum
1.3.13.01. Nucleoside transporter Tsx (1 protein) 1.B.10 (TCDB) PF03502, PDBsum
1.3.14.01. Fatty acid transporter FadL family (7 proteins) 1.B.9 (TCDB) PF03349, PDBsum
1.3.15.01. OmpG porin (3 proteins) 1.B.21 (TCDB) PF09381, PDBsum
1.3.16.01. General Bacterial Porin (GBP) (11 proteins) 1.B.1 (TCDB) PF00267, PDBsum
1.3.16.02. Rhodobacter PorCa Porin (RPP) (2 proteins) 1.B.7 (TCDB)
1.3.16.03. Porins O and P (1 protein) 1.B.5 (TCDB) PF07396, PDBsum
1.3.16.04. Glucose-selective OprB porin (2 proteins) 1.B.19 (TCDB) PF04966, PDBsum
1.3.17.01. Outer membrane protein insertion porin (OmpIP) (2 proteins) 1.B.20 (TCDB) PF03865, PDBsum
1.3.18.01. Malptoporin-like proteins (3 proteins) 1.B.3 (TCDB) PF02264, PDBsum
1.3.19.01. Outer membrane porin (Opr) (11 proteins) 1.B.25 (TCDB) PF03573, PDBsum
1.3.19.02. Alginate export porin (2 proteins) 1.B.13 (TCDB)
1.3.20.01. Outer Membrane Receptor (OMR) (24 proteins) 1.B.14 (TCDB) PF00593, PDBsum
1.3.21.01. Fimbrial usher porin (4 proteins) 1.B.11 (TCDB) PF00577, PDBsum
1.3.22.01. Voltage-dependent anion channel (VDAC) porin (3 proteins) 1.B.8 (TCDB) PF01459, PDBsum
1.3.23.01. Autotransporter-2 (AT-2) (3 proteins) 1.B.40 (TCDB) PF03895, PDBsum
1.3.24.01. TolC-like proteins (8 proteins) 1.B.17 (TCDB) PF02321, PDBsum
1.3.25.01. Aerolysin (n=14,S=14) (7 proteins) 1.C.3 (TCDB) PF07968, PDBsum
1.3.25.02. HlyA hemolysin (n=16,S=16) (2 proteins) 1.C.14 (TCDB) PF12563, PDBsum
1.3.26.01. Mycobacterial Porin (MBP) (n=16,S=16) (1 protein) 1.B.24 (TCDB) PF09203, PDBsum
1.3.27.01. Capsule assembly protein Wzi (1 protein) PF14052, PDBsum
2.1.01.01. Vertebrate secretory phospholipase A2 (58 proteins) PF00068, PDBsum
2.1.01.02. Insect secretory phospholipase A2 (1 protein) PF05826, PDBsum
2.1.01.03. Prokaryotic phospholipase A2 (1 protein) PF09056, PDBsum
2.1.01.04. Plant phospholipase A2 (1 protein)
2.1.02.01. Lipoxygenases (11 proteins) PF00305, PDBsum
2.1.03.01. Bacterial phospholipase C (7 proteins) PF00882, PDBsum
2.1.04.01. Haem peroxidase (3 proteins) PF03098, PDBsum
2.1.05.01. Terpene synthases (2 proteins) PF00432, PDBsum
2.1.05.02. Isoprenyl diphosphate synthases (1 protein) PF00348, PDBsum
2.1.06.01. Signal peptide binding domain (1 protein) PF02978, PDBsum
2.1.07.01. Class III cytochrome C (2 proteins) PF02085, PDBsum
2.1.08.01. Monodomain cytochrome c (12 proteins) PF00034, PDBsum
2.1.08.02. Two-domain cytochrome c (1 protein) PF00034, PDBsum
2.1.09.01. Uteroglobin (1 protein) PF09252, PDBsum
2.1.10.01. Glycolipid transfer protein (5 proteins) PF08718, PDBsum
2.1.11.01. Spectrin repeat (2 proteins) PF00435, PDBsum
2.1.12.01. Outer surface protein C (1 protein) PF01441, PDBsum
2.1.13.01. Crustacean CHH/MIH/GIH neurohormone (1 protein) PF01147, PDBsum
2.1.14.01. Tetratricopeptide repeat (3 proteins) PF00515, PDBsum
2.1.14.02. SusD family (1 protein) PF07980, PDBsum
2.1.14.03. SNAP family (1 protein) 1.F.1 (TCDB)
2.1.15.01. ENTH domain (1 protein) PF01417, PDBsum
2.1.15.02. VHS domain (2 proteins) PF00790, PDBsum
2.1.15.03. Phosphoinositide-binding clathrin adaptor, N-terminal domain (1 protein) PF07651, PDBsum
2.1.16.01. Myelin basic protein (1 protein) PF01669, PDBsum
2.1.17.01. SHERP (1 protein)
2.1.18.01. Annexins (17 proteins) 1.A.31 (TCDB) PF00191, PDBsum
2.1.19.01. BamCD complex (1 protein) PF06804, PDBsum
2.1.20.01. GLA-domain (5 proteins) PF00594, PDBsum
2.1.21.01. Influenza virus matrix protein M1 (1 protein) PF00598, PDBsum
2.1.21.02. GAG p10 protein (2 proteins) PF02337, PDBsum
2.1.21.03. MMLV matrix protein p15 (1 protein) PF01140, PDBsum
2.1.21.04. GAG M domain (1 protein) PF02813, PDBsum
2.1.21.05. EIAV matrix protein p15 (1 protein) PF08723, PDBsum
2.1.22.01. Alternative oxidase (1 protein) PF01786, PDBsum
2.1.23.01. Ectatomin (1 protein) PF06457, PDBsum
2.1.24.01. Saposin (12 proteins) 1.C.35 (TCDB) PF03489, PDBsum
2.1.25.01. Bacteriocin AS-48 (1 protein) 1.C.28 (TCDB) PF09221, PDBsum
2.1.25.02. Carnocyclin A (1 protein) 1.C.90 (TCDB)
2.1.26.01. Colicin pore forming domain (2 proteins) 1.C.1 (TCDB) PF01024, PDBsum
2.1.27.01. delta-Endotoxin (2 proteins) 1.C.2 (TCDB) PF03945, PDBsum
2.1.28.01. Heat-stable enterotoxin B (1 protein) PF09075, PDBsum
2.1.29.01. Apolipoprotein A1/A4/E (4 proteins) PF01442, PDBsum
2.1.29.02. Apolipoprotein A-II (2 proteins) PF04711, PDBsum
2.1.29.03. Apolipoprotein C-I (3 proteins) PF01442, PDBsum
2.1.29.04. Apolipoprotein C-II (1 protein) PF05355, PDBsum
2.1.29.05. Apolipoprotein C-III (1 protein) PF05778, PDBsum
2.1.29.06. Perilipin (1 protein) PF03036, PDBsum
2.1.30.01. Mistic (1 protein) 9.B.23 (TCDB) PF11458, PDBsum
2.1.31.01. Colicin M (2 proteins)
2.1.32.01. Synuclein (1 protein) 1.C.77 (TCDB) PF01387, PDBsum
2.1.33.01. DrrA protein (2 proteins)
2.1.34.01. DivIVA protein (1 protein) PF05103, PDBsum
2.1.35.01. PASCIN (protein kinase C and casein kinase substrate) (2 proteins) PF00611, PDBsum
2.1.36.01. Endoplasmic reticulum oxidoreductin (2 proteins) PF04137, PDBsum
2.1.37.01. PfEMP1 (Plasmodium falciparum erythrocyte membrane protein) (2 proteins) PF03011, PDBsum
2.1.38.01. Corynebacterial porin B (1 protein) 1.B.41 (TCDB) PF11565, PDBsum
2.1.39.01. Viral protein R (VPR) family (1 protein) 1.A.42 (TCDB) PF00522, PDBsum
2.1.40.01. Munc13 (mammalian) homology domain (MHD) (1 protein) PF10540, PDBsum
2.1.41.01. Phosphatidylinositol 3- and 4-kinase (6 proteins) PF00454, PDBsum
2.1.42.01. Enterocin A immunity protein (4 proteins) PF08951, PDBsum
2.1.43.01. Acanthaporin (1 protein)
2.1.44.01. Glycocin (1 protein)
2.1.45.01. Plant antimicrobial alpha-hairpin (1 protein)
2.1.46.01. Ferritin-related protein yciE (1 protein) PF05974, PDBsum
2.1.47.01. Bacterial globin (2 proteins) PF01152, PDBsum
2.1.48.01. Iron-containing alcohol dehydrogenase (1 protein) PF00465, PDBsum
2.1.49.01. 3'5'-cyclic nucleotide phosphodiesterase (1 protein) PF00233, PDBsum
2.1.50.01. PhoU domain (1 protein) PF01895, PDBsum
2.1.51.01. Protein prenyltransferase (2 proteins) PF01239, PDBsum
2.1.52.01. Insect pheromone/odorant binding proteins (1 protein) PF03392, PDBsum
2.1.53.01. Pex19 protein family (1 protein) PF04614, PDBsum
2.1.54.01. Programmed cell death protein 10 family (1 protein) PF06840, PDBsum
2.1.55.01. Pas factor (1 protein) PF09016, PDBsum
2.1.56.01. L27 domain (1 protein) PF09045, PDBsum
2.1.57.01. Adhesion protein FadA (1 protein) PF09403, PDBsum
2.1.58.01. Death domain (1 protein) PF00531, PDBsum
2.1.59.01. Squalene/phytoene synthase (2 proteins) PF00494, PDBsum
2.1.60.01. Sea anemone peptide toxin, class 1 (3 proteins) 8.B.14 (TCDB) PF01549, PDBsum
2.2.01.01. F18-type adhesin (1 protein)
2.2.02.01. Prokaryotic proteases (3 proteins) PF00089, PDBsum
2.2.02.02. Viral proteases (2 proteins) PF02907, PDBsum
2.2.02.03. Peptidase S7, Flavivirus NS3 serine protease (2 proteins) PF00949, PDBsum
2.2.03.01. Eukaryotic aspartyl protease (6 proteins) PF00026, PDBsum
2.2.03.02. Retroviral aspartyl protease (2 proteins) PF00077, PDBsum
2.2.04.01. Retinal pigment epithelial membrane protein (5 proteins) PF03055, PDBsum
2.2.05.01. Plastocyanin/azurin-like (11 proteins) PF00127, PDBsum
2.2.05.02. Plastocyanin-like domain (1 protein) PF02298, PDBsum
2.2.06.01. Retinol binding protein-like (n=8,S=12) (13 proteins) PF08212, PDBsum
2.2.06.02. Fatty acid binding protein-like (n=10) (29 proteins) 8.A.33 (TCDB) PF00061, PDBsum
2.2.07.01. Polyisoprenoid-binding protein (4 proteins) PF04264, PDBsum
2.2.07.02. Streptavidin-like bacterial lipoprotein (1 protein) PF08794, PDBsum
2.2.07.03. Avidin family (1 protein) PF01382, PDBsum
2.2.08.01. Thaumatin (2 proteins) PF00314, PDBsum
2.2.09.01. Kelch motif (1 protein) PF01344, PDBsum
2.2.09.02. SMP-30/Gluconolaconase/LRE-like region (1 protein) PF08450, PDBsum
2.2.09.03. Lactonase, 7-bladed beta-propeller (1 protein) PF10282, PDBsum
2.2.09.04. Nucleoporin Nup120/160 (1 protein) PF11715, PDBsum
2.2.10.01. High potential iron protein (1 protein) PF01355, PDBsum
2.2.11.01. C2 domain (34 proteins) PF00168, PDBsum
2.2.12.01. ML domain (6 proteins) PF02221, PDBsum
2.2.12.02. RHO protein GDP dissociation inhibitor (4 proteins) PF02115, PDBsum
2.2.12.03. Ganglioside GM2 activator (4 proteins)
2.2.12.04. Gamma-adaptin C-terminal appendage domain-like (3 proteins) PF02883, PDBsum
2.2.12.05. Periplasmic glucan biosynthesis protein, MdoG (1 protein) PF04349, PDBsum
2.2.12.06. Immunoprotective extracellular protein (1 protein) PF09167, PDBsum
2.2.13.01. Cellulose binding domain (1 protein) PF00942, PDBsum
2.2.14.01. Discoidin domain (5 proteins) PF00754, PDBsum
2.2.14.02. SUN (Sad1 and UNC) domain (1 protein) PF07738, PDBsum
2.2.15.01. Beta/Gamma crystallin (1 protein) PF00030, PDBsum
2.2.16.01. Lipoproteins of Mycobacteria (1 protein) PF07161, PDBsum
2.2.17.01. Gonadodropin/Follitropin (2 proteins) PF00236, PDBsum
2.2.18.01. Adaptor complexes (1 protein) PF00928, PDBsum
2.2.19.01. Adsorption protein p2 (1 protein) PF09214, PDBsum
2.2.20.01. Pleckstrin-homology domain (43 proteins) PF00169, PDBsum
2.2.20.02. Phosphotyrosine-binding domain (1 protein) PF00640, PDBsum
2.2.20.03. Third domain of FERM (1 protein) PF09379, PDBsum
2.2.21.01. Histidine-rich actin-binding protein (1 protein) PF06268, PDBsum
2.2.21.02. Fibroblast growth factor (1 protein) PF00167, PDBsum
2.2.21.03. Interleukin-1/18 (1 protein) PF00340, PDBsum
2.2.21.04. Cytolethal distending toxin A/C family (1 protein) PF03498, PDBsum
2.2.21.05. Trypsin and protease inhibitor (1 protein) PF00197, PDBsum
2.2.22.01. Hydrophobin (2 proteins) PF06766, PDBsum
2.2.23.01. BamB lipoprotein (2 proteins) PF01011, PDBsum
2.2.24.01. Vitelline membrane outer protein-I (1 protein) PF03762, PDBsum
2.2.25.01. Copper/zinc superoxide dismutase (1 protein) PF00080, PDBsum
2.2.26.01. FYVE, a phosphatidylinositol-3-phosphate binding domain (8 proteins) PF01363, PDBsum
2.2.27.01. Protein kinase C1 domain (8 proteins) PF00130, PDBsum
2.2.28.01. Tachycitin (1 protein) PF01607, PDBsum
2.2.28.02. Scarabaecin (1 protein)
2.2.29.01. MABP (FAM125) family (1 protein) PF10240, PDBsum
2.2.30.01. Elafin-like (2 proteins) PF10511, PDBsum
2.2.31.01. Fibronectin type II module (1 protein) PF00040, PDBsum
2.2.32.01. Anemone pore-forming cytolysin (5 proteins) 1.C.38 (TCDB) PF06369, PDBsum
2.2.33.01. Chitin recognition protein (5 proteins) PF00187, PDBsum
2.2.34.01. Conotoxin O1 (13 proteins) PF02950, PDBsum
2.2.34.02. Spider toxins (33 proteins) 8.B.6 (TCDB) PF02819, PDBsum
2.2.34.03. Insect toxins (2 proteins) PF08117, PDBsum
2.2.34.04. Albumin 1 (2 proteins) PF08027, PDBsum
2.2.34.05. Tachystatin (3 proteins) PF11478, PDBsum
2.2.34.06. Gurmarin (1 protein)
2.2.34.07. Antifungal protein (1 protein) PF11410, PDBsum
2.2.34.08. Agouti protein (2 proteins) PF05039, PDBsum
2.2.34.09. Conotoxin M (2 proteins) PF02950, PDBsum
2.2.34.10. Scorpion calcine family (1 protein) PF08099, PDBsum
2.2.35.01. Thiol-activated cytolysin (3 proteins) 1.C.12 (TCDB) PF01289, PDBsum
2.2.36.01. Cyclotide (18 proteins) PF03784, PDBsum
2.2.37.01. Copper amine oxidase (1 protein) PF01179, PDBsum
2.2.38.01. Cloacin translocation domain (1 protein) PF03515, PDBsum
2.2.39.01. Snake venom toxins (15 proteins) C.1.74 (TCDB) PF00087, PDBsum
2.2.39.02. Dendroaspin (1 protein) PF00087, PDBsum
2.2.40.01. Neurotoxin III (1 protein) PF08098, PDBsum
2.2.41.01. Vertebrate defensin (22 proteins) 1.C.85 (TCDB) PF00323, PDBsum
2.2.41.02. Sea anemone sodium channel inhibitory toxin (8 proteins) 8.B.11 (TCDB) PF00706, PDBsum
2.2.41.03. Big defensin (2 proteins)
2.2.41.04. Bacillus cereus group antimicrobial protein (1 protein) PF12197, PDBsum
2.2.41.05. Myotoxin (1 protein) PF00819, PDBsum
2.2.42.01. Pneumovirus matrix protein (1 protein) PF03393, PDBsum
2.2.43.01. Mitochondrial biogenesis AIM24 (1 protein) PF01987, PDBsum
2.2.44.01. PLAT domain (1 protein) PF01477, PDBsum
2.2.45.01. Autotransporter pertactin domain (3 proteins) 1.B.12 (TCDB) PF03212, PDBsum
2.2.45.02. Pectate lyase (1 protein) PF00544, PDBsum
2.2.47.01. N-terminal domain of cellulase (1 protein) PF02927, PDBsum
2.2.48.01. Molybdenum cofactor biosynthesis protein MoeA (1 protein) PF03453, PDBsum
2.2.49.01. Insect antifreeze protein (1 protein) PF05264, PDBsum
2.2.50.01. Treponema lipoprotein (3 proteins) 1.B.45 (TCDB)
2.2.51.01. Necrosis inducing protein (1 protein) PF05630, PDBsum
2.2.52.01. Allene oxide cyclase (1 protein) PF06351, PDBsum
2.2.53.01. Fas apoptotic inhibitory molecule (1 protein) PF06905, PDBsum
2.2.54.01. Hepatitis C virus non-structural 5a domain (1 protein) PF08300, PDBsum
2.2.55.01. Aspartic peptidase of Shewanella (1 protein) PF08985, PDBsum
2.2.56.01. Beta-2-glycoprotein-1 fifth domain (1 protein) PF09014, PDBsum
2.2.57.01. Levansucrase/Invertase (1 protein) PF02435, PDBsum
2.2.58.01. Arrestin (1 protein) PF00339, PDBsum
2.3.01.01. Beta-glycanases (2 proteins) PF02055, PDBsum
2.3.01.02. Family 1 of glycosyl hydrolase (3 proteins) PF00232, PDBsum
2.3.01.03. Alpha amylase (1 protein) PF00128, PDBsum
2.3.01.04. Hyaluronidase (1 protein) PF01630, PDBsum
2.3.01.05. Glucanosyltransferase (2 proteins) PF03198, PDBsum
2.3.01.06. Cellulase (glycosyl hydrolase family 5) (1 protein) PF00150, PDBsum
2.3.01.07. Glycosyl hydrolases family 18 (2 proteins) PF00704, PDBsum
2.3.01.08. Glycosyl hydrolase family 26 (1 protein) PF02156, PDBsum
2.3.01.09. Glycosyl hydrolase family 53 (1 protein) PF07745, PDBsum
2.3.01.10. Glycosyl hydrolase family 59 (1 protein) PF02057, PDBsum
2.3.02.01. Mammalian PLC (3 proteins) PF00387, PDBsum
2.3.02.02. Bacterial PLC (4 proteins) PF00388, PDBsum
2.3.03.01. FMN-linked oxidoreductases (5 proteins) PF01180, PDBsum
2.3.04.01. PHP domain (1 protein) PF02811, PDBsum
2.3.04.01. Tyrosine-dependent oxidoreductases (6 proteins) PF00106, PDBsum
2.3.05.01. Thi4 family (1 protein) PF01946, PDBsum
2.3.05.02. Pyridine nucleotide-disulphide oxidoreductase (4 proteins) PF07992, PDBsum
2.3.05.03. FAD dependent oxidoreductase (2 proteins) PF01266, PDBsum
2.3.05.04. Zinc-binding dehydrogenase (1 protein) PF00107, PDBsum
2.3.05.05. GDP dissociation inhibitor (2 proteins) PF00996, PDBsum
2.3.05.06. Methyltransferase domain (1 protein) PF08241, PDBsum
2.3.06.01. Acetylcholinesterase-like (15 proteins) PF00135, PDBsum
2.3.06.02. Mycobacterial antigens (4 proteins) PF00756, PDBsum
2.3.06.03. Gastric lipase (2 proteins) PF04083, PDBsum
2.3.06.04. Thioesterases (4 proteins) PF02089, PDBsum
2.3.06.05. Carboxylesterase/Thioesterase 1 (6 proteins) PF02230, PDBsum
2.3.06.06. Fungal lipases (16 proteins) PF01764, PDBsum
2.3.06.07. Bacterial lipase (13 proteins) PF01674, PDBsum
2.3.06.08. Pancreatic lipase (11 proteins) PF00151, PDBsum
2.3.06.09. Cutinase-like (6 proteins) PF01083, PDBsum
2.3.06.10. Platelet-activating factor acetylhydrolase family (3 proteins) PF03403, PDBsum
2.3.06.11. Putative lysophospholipase (2 proteins) PF12146, PDBsum
2.3.06.12. Carboxylesterase (6 proteins) PF07859, PDBsum
2.3.06.13. NDRG family (2 proteins) PF03096, PDBsum
2.3.06.14. Secretory lipase (2 proteins) PF03583, PDBsum
2.3.06.15. Hydroxynitrile lyase-like (1 protein) PF00561, PDBsum
2.3.07.01. M42 glutamyl aminopeptidase (1 protein) PF05343, PDBsum
2.3.08.01. Lysophospholipase (2 proteins) PF01734, PDBsum
2.3.09.01. Cytidylyltransferase (3 proteins) PF01467, PDBsum
2.3.10.01. Glycosyltransferase family 28 (4 proteins) PF03033, PDBsum
2.3.10.02. Glycosyltransferase family 70 (1 protein)
2.3.10.03. Glycosyltransferase family 9 (2 proteins) PF01075, PDBsum
2.3.10.04. Glycosyltransferase family 2 (1 protein) PF00535, PDBsum
2.3.10.05. Glycosyltransferase family 30 (1 protein) PF04413, PDBsum
2.3.11.01. Ferrochelatase (2 proteins) PF00762, PDBsum
2.3.12.01. Myotubularin-like phosphatases (1 protein) PF02893, PDBsum
2.3.13.01. Glutathione S-transferase (1 protein) PF00462, PDBsum
2.3.13.02. Phosducin (3 proteins) PF02114, PDBsum
2.3.13.03. DSBA-like thioredoxin domain (1 protein) PF01323, PDBsum
2.3.13.04. Glutathione peroxidase (1 protein) PF00255, PDBsum
2.3.13.05. AhpC/TSA family (1 protein) PF00578, PDBsum
2.3.13.06. Glutathione S-transferase (2 proteins) PF02798, PDBsum
2.3.13.07. Intracellular chloride channel (CLIC) (1 protein) 1.A.12 (TCDB) PF13417, PDBsum
2.3.14.01. CRAL/TRIO domain (10 proteins) PF00650, PDBsum
2.3.14.02. SpoIIaa-like protein (1 protein) PF11964, PDBsum
2.3.15.01. Electron transfer flavoprotein (2 proteins) PF01012, PDBsum
2.3.15.02. Phosphoadenosine phosphosulfate reductase family (1 protein) PF01507, PDBsum
2.3.16.01. Shikimate kinase (2 proteins) PF01202, PDBsum
2.3.16.02. Tandem RecA ATPase-like (1 protein) 3.A.5 (TCDB) PF07517, PDBsum
2.3.16.03. G-proteins (1 protein) PF00503, PDBsum
2.3.16.04. Dynamin (2 proteins) PF00350, PDBsum
2.3.16.05. ArsA ATPase (2 proteins) PF02374, PDBsum
2.3.16.06. ADP ribosylation factor (8 proteins) PF00025, PDBsum
2.3.16.07. Ras family (4 proteins) PF00071, PDBsum
2.3.16.08. Interferon-inducible GTPase (1 protein) PF05049, PDBsum
2.3.16.09. Cobalamin synthesis protein cobW (1 protein) PF07683, PDBsum
2.3.16.10. Tetraacyldisaccharide 4-kinase (2 proteins) PF02606, PDBsum
2.3.17.01. DAHP synthetase I family (1 protein) PF00793, PDBsum
2.3.17.02. Pterin binding enzyme (2 proteins) PF00809, PDBsum
2.3.18.01. Choline/carnitine O-acyltransferases (8 proteins) PF00755, PDBsum
2.3.18.02. Condensation domain (1 protein) PF00668, PDBsum
2.3.19.01. Glycosylating toxin (3 proteins) 1.C.57 (TCDB) PF04488, PDBsum
2.3.19.02. Glycosyltransferase family 6 (1 protein) PF03414, PDBsum
2.3.19.03. Glycosyltransferase like family 2 (1 protein) PF13641, PDBsum
2.3.20.01. CheY-like (1 protein) PF01058, PDBsum
2.3.21.01. Dual specificity phosphatase (1 protein) PF00782, PDBsum
2.3.22.01. NADPH-dependent FMN reductase (1 protein) PF03358, PDBsum
2.3.22.02. NrdI Flavodoxin like (2 proteins) PF07972, PDBsum
2.3.23.01. Beta-ketoacyl synthase (1 protein) PF00109, PDBsum
2.3.24.01. Haloacid dehalogenase-like hydrolase (2 proteins) PF00702, PDBsum
2.3.24.02. Haloacid dehalogenase-like hydrolase (3 proteins) PF08282, PDBsum
2.3.25.01. GDSL-like Lipase/Acylhydrolase (1 protein) PF00657, PDBsum
2.3.26.01. Fatty acid synthesis protein (1 protein) PF02504, PDBsum
2.3.27.01. Dihydrofolate reductase (1 protein) PF00186, PDBsum
2.3.28.01. Aldo/keto reductase family (2 proteins) PF00248, PDBsum
2.3.29.01. Putative undecaprenyl diphosphate synthase (1 protein) PF01255, PDBsum
2.3.30.01. Low molecular weight phosphotyrosine protein phosphatase (1 protein) PF01451, PDBsum
2.3.31.01. PTS system sorbose subfamily IIB component (1 protein) PF03830, PDBsum
2.3.32.01. Mur ligase (1 protein) PF08245, PDBsum
2.3.33.01. Glycosyl hydrolase family 85 (1 protein) PF03644, PDBsum
2.4.01.01. GMC oxidoreductases (2 proteins) PF00732, PDBsum
2.4.02.01. Epoxide Hydrolase (1 protein) PF07858, PDBsum
2.4.02.02. Nuclear transport factor 2 (2 proteins) PF02136, PDBsum
2.4.03.01. Transcriptional factor tubby (3 proteins) PF01167, PDBsum
2.4.04.01. Neutral sphingomyelinases (4 proteins) PF03372, PDBsum
2.4.04.02. Spider sphingomyelinases (1 protein)
2.4.05.01. Sterol carrier protein (7 proteins) PF02036, PDBsum
2.4.05.02. Sterol binding-like domain of SDS hydrolase (1 protein)
2.4.06.01. STAR domain (10 proteins) 9.B.64 (TCDB) PF01852, PDBsum
2.4.06.02. Phosphatidylinositol transfer protein (PITP) (4 proteins) PF02121, PDBsum
2.4.06.03. Pathogenesis-related protein Bet v I family (2 proteins) PF00407, PDBsum
2.4.06.04. Polyketide cyclase/dehydrase and lipid transport (3 proteins) PF03364, PDBsum
2.4.07.01. PX domain (17 proteins) PF00787, PDBsum
2.4.08.01. Pancreatic ribonuclease family (1 protein) PF00074, PDBsum
2.4.09.01. Protein kinase domain (3 proteins) PF00069, PDBsum
2.4.10.01. Synapsin (1 protein) PF02078, PDBsum
2.4.11.01. Plant thionin (9 proteins) 1.C.44 (TCDB) PF00321, PDBsum
2.4.12.01. Liver-expressed antimicrobial peptide (1 protein) PF07359, PDBsum
2.4.13.01. OSBP-related proteins (2 proteins) PF01237, PDBsum
2.4.15.01. Negative factor (Nef) protein (6 proteins) PF00469, PDBsum
2.4.16.01. Long-chain scorpion toxins (25 proteins) 8.B.1 (TCDB) PF00537, PDBsum
2.4.16.02. Arthropod defensins (10 proteins) 1.C.47 (TCDB) PF01097, PDBsum
2.4.16.03. Short-chain scorpion toxins (5 proteins) PF00451, PDBsum
2.4.16.04. Plant defensins (11 proteins) 1.C.45 (TCDB) PF00304, PDBsum
2.4.16.06. Myticin (1 protein) PF10690, PDBsum
2.4.16.07. Diapausin (1 protein) PF08036, PDBsum
2.4.16.08. Macin (1 protein)
2.4.16.09. Plant self-incompatibility response protein (1 protein) PF06876, PDBsum
2.4.16.10. Prokineticin (1 protein) PF06607, PDBsum
2.4.16.11. Bee venom toxins (1 protein)
2.4.16.12. Fungal defensins (3 proteins)
2.4.17.01. Vitellogenin (1 protein) PF01347, PDBsum
2.4.18.01. Phospholipase B (1 protein) PF04916, PDBsum
2.4.19.01. CutA1 divalent ion tolerance protein (1 protein) PF03091, PDBsum
2.4.20.01. Papain family cysteine protease (2 proteins) PF00112, PDBsum
2.4.20.02. N-acetyltransferase (2 proteins) PF00797, PDBsum
2.4.20.03. Porcine arterivirus-type cysteine proteinase alpha (1 protein) PF05410, PDBsum
2.4.20.04. Lecithin retinol acyltransferase (1 protein) PF04970, PDBsum
2.4.21.01. Hedgehog amino-terminal signalling domain (0 proteins) PF01085, PDBsum
2.4.21.02. D-alanyl-D-alanine carboxypeptidase (1 protein) PF02557, PDBsum
2.4.23.01. Heme NO binding (1 protein) PF07700, PDBsum
2.4.24.01. Mandelate racemase/Muconate lactonizing enzyme (1 protein) PF01188, PDBsum
2.4.25.01. Acetyltransferase (GNAT) family (1 protein) PF00583, PDBsum
2.4.26.01. HIT domain (1 protein) PF01230, PDBsum
2.4.27.01. AIG2-like family (1 protein) PF06094, PDBsum
2.4.28.01. Phenazine biosynthesis-like protein (1 protein) PF02567, PDBsum
2.4.29.01. Staphylococcal/Streptococcal toxin (2 proteins) PF02876, PDBsum
2.4.30.01. MATH domain (1 protein) PF00917, PDBsum
2.4.31.01. Fibrinogen beta and gamma chains (1 protein) PF00147, PDBsum
2.4.32.01. PAP2 superfamily (1 protein) PF01569, PDBsum
2.4.33.01. Putative peptidoglycan binding domain (3 proteins) PF01471, PDBsum
2.4.33.02. Collagenase (1 protein) PF01752, PDBsum
2.4.34.01. Cysteine-rich secretory protein family (1 protein) PF00188, PDBsum
2.4.35.01. Catalase (1 protein) PF00199, PDBsum
2.4.36.01. Transforming growth factor (TGF)-beta (1 protein) PF00688, PDBsum
2.4.37.01. Acylphosphatase (1 protein) PF00708, PDBsum
2.4.38.01. N-acetylmuramoyl-L-alanine amidase (1 protein) PF01510, PDBsum
2.4.39.01. Antirestriction protein (1 protein) PF03230, PDBsum
2.4.40.01. IpaB/EvcA family (1 protein) PF03278, PDBsum
2.4.41.01. Hepatitis C virus non-structural protein NS2 (1 protein) PF01538, PDBsum
2.4.42.01. Bactericidal permeability increasing protein family (1 protein) 1.C.40 (TCDB) PF01273, PDBsum
2.4.45.01. Formylglycine-generating sulfatase enzyme (1 protein) PF03781, PDBsum
2.4.46.01. Cell envelope-related transcriptional attenuator domain (1 protein) PF03816, PDBsum
2.4.47.01. Neutral/alkaline non-lysosomal ceramidase (1 protein) PF04734, PDBsum
2.4.48.01. PPPDE putative peptidase domain (1 protein) PF05903, PDBsum
2.4.49.01. Inositol-pentakisphosphate 2-kinase (1 protein) PF06090, PDBsum
2.4.50.01. Vesiculovirus matrix protein (2 proteins) PF06326, PDBsum
2.4.51.01. Heme-binding protein A (1 protein) PF06438, PDBsum
2.4.52.01. Spondin (1 protein) PF06468, PDBsum
2.4.53.01. Resistin (2 proteins) PF06954, PDBsum
2.4.54.01. PilZ domain (1 protein) PF07238, PDBsum
3.1.01.01. Cyclotide propeptide (2 proteins)
3.1.01.02. Leader peptides (2 proteins)
3.1.01.03. Signal peptides (3 proteins)
3.1.01.04. Chloroplastic transit peptide (1 protein)
3.1.01.05. Vacuolar targeting peptide (1 protein)
3.1.01.06. Mitochondrial targeting peptide (1 protein)
3.1.02.01. GPCR peptides (4 proteins)
3.1.02.02. Voltage-gated channel peptides (2 proteins)
3.1.02.03. Peptides of ATP synthase subunit b (1 protein) PF00430, PDBsum
3.1.02.04. V-type proton ATPase peptides (1 protein)
3.1.02.05. Nicotinic acetylcholine receptor peptides (5 proteins)
3.1.02.06. HCO3- transporter peptides (2 proteins) 2.A.31 (TCDB) PF00955, PDBsum
3.1.02.07. Monovalent cation:proton antiporter-1 peptides (3 proteins) 2.A.36 (TCDB) PF00999, PDBsum
3.1.02.08. Copper transporter 1 peptides (3 proteins) 1.A.56 (TCDB)
3.1.02.09. Peptides of platelet endothelial cell adhesion molecule (1 protein)
3.1.02.10. Transmembrane emp24 domain-containing protein 10 (1 protein) PF01105, PDBsum
3.1.02.11. Methyl-accepting chemotaxis protein II peptide (1 protein)
3.1.02.12. Peptides of epidermal growth factor receptors (1 protein)
3.1.03.01. Membrane anchor helix of BAR domain (1 protein)
3.1.03.02. FATC domain (1 protein) PF02260, PDBsum
3.1.03.03. Membrane-binding domain of phosphotransferase IIA component (2 proteins) PF00358, PDBsum
3.1.03.04. Anchor helix of protein yopD (1 protein) PF05844, PDBsum
3.1.03.05. Anchor helix of glycosyl transferases group 1 (1 protein) PF13579, PDBsum
3.1.04.01. Peptides of STE5 protein (1 protein) PF11610, PDBsum
3.1.04.02. Prion protein peptides (2 proteins) PF00377, PDBsum
3.1.04.03. Peptides of viral protein R (4 proteins) 1.A.42 (TCDB) PF00522, PDBsum
3.1.04.04. Peptides of huntingtin (1 protein)
3.1.05.01. Platelet factor-derived peptides (1 protein)
3.1.05.02. Lipopeptide detergents (1 protein)
3.1.05.03. Basic amphiphilic peptides (1 protein)
3.1.05.04. Distinctin (1 protein)
3.1.05.05. Anticoccidial peptide PW2 (1 protein)
3.1.05.06. Transportan (1 protein)
3.1.05.07. Penetratin (1 protein)
3.1.05.08. MSI-594 derived peptides (1 protein)
3.1.05.09. Histidine-rich alpha-helical peptides (1 protein)
3.1.05.10. WALP peptides (2 proteins)
3.1.06.01. Apolipoprotein A-I/E peptides (2 proteins) PF01442, PDBsum
3.1.06.02. Designed apolipoprotein-like peptides (2 proteins)
3.1.07.01. Fusion peptides of viral envelope glycoproteins (5 proteins)
3.1.07.02. Juxtamembrane peptides of viral envelope glycoproteins (8 proteins)
3.1.07.03. Fusion peptides of hemagglutinin (6 proteins)
3.1.07.04. Hepatitis C virus envelope glycoprotein E peptides (2 proteins) PF01539, PDBsum
3.1.07.05. Membrane anchor domain of non-structural viral polyproteins (5 proteins) PF01506, PDBsum
3.1.07.06. Membrane anchor domain of viral protease (3 proteins)
3.1.07.07. Fusion protein p14 (1 protein)
3.1.07.08. Peptide of outer capsid glycoprotein VP7 (1 protein) PF00434, PDBsum
3.1.08.01. Antifreeze protein, type I (1 protein)
3.1.09.01. Herpesvirus US12 family (1 protein) PF05363, PDBsum
3.1.10.01. Streptococcal competence stimulating peptide (2 proteins) PF03047, PDBsum
3.1.11.01. Neuropeptide Y family (7 proteins) PF00159, PDBsum
3.1.11.02. Glucagon family (10 proteins) PF00123, PDBsum
3.1.11.03. Motilin family (2 proteins) PF04644, PDBsum
3.1.11.04. Orexin (1 protein) PF02072, PDBsum
3.1.12.01. Endothelin (5 proteins) PF00322, PDBsum
3.1.13.01. Calcitonin (7 proteins) 1.C.49 (TCDB) PF00214, PDBsum
3.1.14.01. Tachykinin family (7 proteins) PF02202, PDBsum
3.1.15.01. Pediocin (4 proteins) 1.C.24 (TCDB)
3.1.15.02. Lactococcin A (1 protein) 1.C.22 (TCDB)
3.1.15.03. Plantaricin EF (2 proteins) 1.C.29 (TCDB)
3.1.15.04. Plantaricin JK (2 proteins) 1.C.30. (TCDB)
3.1.16.01. Lactococcin G (2 proteins) 1.C.25 (TCDB) PF08129, PDBsum
3.1.17.01. Antimicrobial peptide HP (1 protein)
3.1.18.01. Delta lysin (1 protein) PF05372, PDBsum
3.1.19.01. Peptaibol (11 proteins) 1.D.5 (TCDB)
3.1.20.01. Alpha-conotoxin (18 proteins) PF07365, PDBsum
3.1.21.01. Cecropin (6 proteins) 1.C.17 (TCDB) PF06451, PDBsum
3.1.21.02. Mastoparan family (2 proteins) 1.C.32 (TCDB) PF08249, PDBsum
3.1.21.03. Melittin (1 protein) 1.C.18 (TCDB) PF01372, PDBsum
3.1.21.04. Oxyopinin (1 protein) PF08025, PDBsum
3.1.21.05. Poneratoxin (1 protein)
3.1.21.06. Stomoxyn (2 proteins) PF11585, PDBsum
3.1.21.07. Cupiennin (1 protein)
3.1.22.01. Scorpion NDBP 5 family (1 protein)
3.1.23.01. Meucin (1 protein)
3.1.24.01. Penaeidin (2 proteins) PF05927, PDBsum
3.1.25.01. Latarcin (2 proteins) PF10279, PDBsum
3.1.26.01. Pleurocidin (2 proteins) 1.C.62 (TCDB) PF08107, PDBsum
3.1.27.01. Pardaxin (2 proteins) PF07425, PDBsum
3.1.28.01. Dermaseptin (2 proteins) 1.C.52 (TCDB) PF12121, PDBsum
3.1.28.02. Alyteserin (1 protein)
3.1.28.03. Bombinin (1 protein) PF05298, PDBsum
3.1.28.04. Brevinin/gaegurin (5 proteins) PF03032, PDBsum
3.1.28.05. Maculatin (2 proteins) 1.C.76 (TCDB) PF08256, PDBsum
3.1.28.06. Magainin (2 proteins)
3.1.29.01. Cathelicidin (10 proteins) 1.C.33 (TCDB) PF00666, PDBsum
3.1.29.02. Indolicidin (2 proteins)
3.1.29.03. Tritrpticin (1 protein)
3.1.30.01. Lactotransferrin-based peptides (2 proteins) PF00405, PDBsum
3.1.31.01. Dermcidin (2 proteins)
3.1.32.01. Toxin-antitoxin module (1 protein) 1.C.103 (TCDB)
3.2.01.01. Arenicin (2 proteins) 1.C.81 (TCDB) PF04089, PDBsum
3.2.01.02. Thanatin (1 protein)
3.2.01.03. Androctonin (1 protein)
3.2.01.04. Gomesin (1 protein)
3.2.01.05. Tachyplesin (2 proteins)
3.2.01.06. Theta-defensin (2 proteins)
3.2.01.07. Protegrin (1 protein)
3.2.01.08. Lactoferricin B (2 proteins) PF00405, PDBsum
3.2.02.01. Ksi conotoxins (1 protein) 8.B.4 (TCDB)
3.2.02.02. Conotoxin T (1 protein)
3.2.03.01. Hepcidin (2 proteins) PF06446, PDBsum
3.2.04.01. Cyclic trypsin inhibitor STFI-1 (1 protein)
3.2.05.01. Microcin J25 (2 proteins) 9.A.52 (TCDB)
3.2.05.02. Subtilosin A (1 protein) 1.C.84 (TCDB) PF11420, PDBsum
3.2.06.01. Paralytic peptide family (6 proteins) PF02425, PDBsum
3.2.07.01. Tricyclic peptide RP71935 (1 protein)
3.2.08.01. Beta-sheet peptides of amyloid beta A4 protein (5 proteins) PF03494, PDBsum
3.2.08.02. Beta-sheet peptides of major prion protein (2 proteins) PF00377, PDBsum
3.2.09.01. Octreotide (1 protein)
3.3.01.01. Gramicidin A (4 proteins) 1.D.1 (TCDB)
3.3.02.01. Collagen triple helix (2 proteins) PF01391, PDBsum
3.4.01.01. Gramicidin S (1 protein)
3.4.02.01. Actagardine (1 protein)
3.4.02.02. Mersacidin (4 proteins)
3.4.02.03. Nisin (1 protein) 1.C.20 (TCDB) PF02052, PDBsum
3.4.02.04. Cinnamycin (1 protein)
3.4.02.05. Lichenicidin (2 proteins)
3.4.02.06. Epilancin (1 protein)
3.4.03.01. Heat-stable enterotoxin (1 protein)
3.4.04.01. Daptomycin (4 proteins) 1.D.15 (TCDB)
3.4.04.02. Surfactin (1 protein) 1.D.11 (TCDB)
3.4.05.01. Cyclosporin (1 protein)
3.4.06.01. Conomarphin (1 protein)
3.4.07.01. Trp-rich synthetic peptides (1 protein)
3.4.07.02. Compstatin (1 protein)
3.4.08.01. Neurotensin/neuromedin N (1 protein) PF07421, PDBsum
3.4.09.01. Catestatin (2 proteins) PF01271, PDBsum