UNIVERSITY OF MICHIGAN
|
COLLEGE OF PHARMACY
|
MOSBERG LAB
PDB ID or protein name
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LIPID COMPOSITION ATLAS
Protein Classification
Types
(3 types)
Classes
(11 classes)
Superfamilies
(392 superfamilies)
Families
(667 families)
Species
(538 species)
Localization
(24 types)
All proteins in OPM
(2172 proteins)
Protein Links
PDB Sum
,
PDB
,
OCA
,
MPKS
,
PDBTM
,
MPDB
,
CGDB
Type:
2. Monotopic/peripheral
(4 classes)
Class:
2.2. All beta monotopic/peripheral
(57 superfamilies)
Superfamily:
2.2.34. Omega conotoxin-like knottin
(10 families)
Family:
2.2.34.01. Conotoxin O1
PF02950
,
PDBsum
Conotoxin Gm9.1
Conus gloriamaris (Glory-of-the-Seas cone)
(
1ixt
)
Conotoxin mr3e
Conus marmoreus
(
2efz
)
Conotoxin TVIIA
Conus tulipa (Fish-hunting cone snail)
(
1eyo
)
Delta conotoxin EVIA
Conus ermineus
(
1g1z
, 1g1p, 1sbu)
Delta conotoxin TxVIA
Conus textile
(
1fu3
)
Kappa-conotoxin PVIIA
Conus purpurascens (Purple cone)
(
1av3
, 1kcp)
Mu-conotoxin GS
Conus geographus (Geography cone)
(
1ag7
)
Mu-O conotoxin MrVIB
Conus marmoreus
(
1rmk
)
Omega conotoxin SO3
Conus striatus
(
1fyg
)
Omega conotoxin TxVII
Conus textile
(
1f3k
)
Omega-conotoxin GVIA
Conus geographus (Geography cone)
(
2cco
, 1omc, 1tr6, 1ttl)
Omega-conotoxin MVIIA
Conus magus
(
1mvi
, 1dw4, 1dw5, 1feo, 1omg, 1tt3, 1ttk)
Omega-conotoxin SVIB
Conus striatus
(
1mvj
)
See list of these PDB codes
2.2.34.01. Conotoxin O1
PF02950
,
PDBsum
(13 proteins)
Protein Name
PDB ID
Species
Localization
Num. Subunits
Num. TM Sec. Structs.
Hydrophobic Thickness or Depth (Å)
Tilt Angle (°)
ΔG
transfer
(kcal/mol)
Conotoxin Gm9.1
1ixt
Conus gloriamaris (Glory-of-the-Seas cone)
Secreted
1
0
1.7 ± 1.7
85 ± 17
-3.0
Conotoxin mr3e
2efz
Conus marmoreus
Secreted
1
0
1.0 ± 1.3
83 ± 25
-3.2
Conotoxin TVIIA
1eyo
Conus tulipa (Fish-hunting cone snail)
Secreted
1
0
2.2 ± 0.7
74 ± 9
-4.6
Delta conotoxin EVIA
1g1z
Conus ermineus
Secreted
1
0
6.5 ± 1.9
72 ± 18
-8.7
Delta conotoxin TxVIA
1fu3
Conus textile
Secreted
1
0
6.5 ± 1.8
25 ± 18
-8.3
Kappa-conotoxin PVIIA
1av3
Conus purpurascens (Purple cone)
Secreted
1
0
3.4 ± 1.9
77 ± 7
-3.2
Mu-conotoxin GS
1ag7
Conus geographus (Geography cone)
Secreted
1
0
1.9 ± 1.0
68 ± 15
-2.6
Mu-O conotoxin MrVIB
1rmk
Conus marmoreus
Secreted
1
0
10.1 ± 1.3
62 ± 19
-10.7
Omega conotoxin SO3
1fyg
Conus striatus
Secreted
1
0
2.9 ± 1.1
76 ± 18
-3.5
Omega conotoxin TxVII
1f3k
Conus textile
Secreted
1
0
2.8 ± 1.4
57 ± 18
-4.5
Omega-conotoxin GVIA
2cco
Conus geographus (Geography cone)
Secreted
1
0
4.4 ± 0.9
62 ± 7
-3.1
Omega-conotoxin MVIIA
1mvi
Conus magus
Secreted
1
0
4.7 ± 1.9
68 ± 14
-4.0
Omega-conotoxin SVIB
1mvj
Conus striatus
Secreted
1
0
1.1 ± 2.1
20 ± 24
-2.1
Copyright © 2005-2013
Andrei Lomize
,
Mikhail Lomize
and
Irina Pogozheva
University of Michigan, Ann Arbor, MI 48109 USA