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LIPID COMPOSITION ATLAS
Protein Classification
Types
(3 types)
Classes
(11 classes)
Superfamilies
(392 superfamilies)
Families
(667 families)
Species
(538 species)
Localization
(24 types)
All proteins in OPM
(2172 proteins)
Protein Links
PDB Sum
,
PDB
,
OCA
,
MPKS
,
PDBTM
,
MPDB
,
CGDB
Type:
1. Transmembrane
(3 classes)
Class:
1.2. Alpha-helical bitopic
(42 superfamilies)
Superfamily:
1.2.04. Integrin
(1 family)
Family:
1.2.04.01. Integrin
PF08725
,
PDBsum
Integrin alpha-1
Homo sapiens
(
2l8s
)
Integrin alpha-IIb, complex with integrin beta-3
Homo sapiens
(
2knc
, 2k1a, 2k9j, 2rmz, 2rn0)
Homo sapiens
(
2k9j
, 2k1a, 2knc, 2rmz, 2rn0)
Integrin alpha-IIb, cytoplasmic domain
Homo sapiens
(
1s4w
)
Integrin alpha-IIb, transmembrane helix
Homo sapiens
(
2k1a
, 2k9j, 2knc)
Integrin beta-1, complex with talin-2
Homo sapiens
(
3g9w
)
Integrin beta-3, cytoplasmic domain
Homo sapiens
(
1s4x
, 2ljd, 2lje, 2ljf)
Integrin beta-3, cytoplasmic domain, biphosphorylated (747pY, 759pY)
Homo sapiens
(
2lje
, 1s4x, 2ljd, 2ljf)
Integrin beta-3, cytoplasmic domain, monophosphorylated (747pY)
Homo sapiens
(
2ljd
, 1s4x, 2lje, 2ljf)
Homo sapiens
(
2ljf
, 1s4x, 2ljd, 2lje)
Integrin beta-3, transmembrane helix
Homo sapiens
(
2rmz
, 2k9j, 2l91, 2rn0)
Integrin beta-3/alpha-V complex
Homo sapiens
(
3ije
, 1jv2, 1kup, 1kuz, 1l5g, 1m1x, 1m8o, 1mk7, 1mk9, 1rn0, 1s4x, 1tye, 1u8c, 2ini, 2k9j, 2knc, 2kv9, 2l1c, 2ljd, 2lje, 2ljf, 2q6w, 2rmz, 2rn0, 2vc2, 2vdk, 2vdl, 2vdm, 2vdn, 2vdo, 2vdp, 2vdq, 2vdr, 3fcs, 3fcu, 3nid, 3nif, 3nig)
See list of these PDB codes
1.2.04.01. Integrin
PF08725
,
PDBsum
(12 proteins)
Protein Name
PDB ID
Species
Localization
Num. Subunits
Num. TM Sec. Structs.
Hydrophobic Thickness or Depth (Å)
Tilt Angle (°)
ΔG
transfer
(kcal/mol)
Integrin alpha-1
2l8s
Homo sapiens
Eukaryo. plasma
1
1
32.0 ± 3.7
40 ± 1
-34.5
Integrin alpha-IIb, complex with integrin beta-3
2knc
Homo sapiens
Eukaryo. plasma
2
2
34.8 ± 1.4
13 ± 5
-46.2
Integrin alpha-IIb, complex with integrin beta-3
2k9j
Homo sapiens
Eukaryo. plasma
2
2
36.4 ± 3.3
20 ± 1
-56.4
Integrin alpha-IIb, cytoplasmic domain
1s4w
Homo sapiens
Eukaryo. plasma
1
0
2.9 ± 0.3
69 ± 3
-9.1
Integrin alpha-IIb, transmembrane helix
2k1a
Homo sapiens
Eukaryo. plasma
1
1
34.4 ± 2.6
17 ± 6
-36.9
Integrin beta-1, complex with talin-2
3g9w
Homo sapiens
Eukaryo. plasma
2
0
8.7 ± 2.5
83 ± 6
-6.6
Integrin beta-3, cytoplasmic domain
1s4x
Homo sapiens
Eukaryo. plasma
1
0
6.9 ± 1.0
18 ± 10
-5.8
Integrin beta-3, cytoplasmic domain, biphosphorylated (747pY, 759pY)
2lje
Homo sapiens
Eukaryo. plasma
1
0
4.0 ± 0.5
74 ± 2
-7.0
Integrin beta-3, cytoplasmic domain, monophosphorylated (747pY)
2ljd
Homo sapiens
Eukaryo. plasma
1
0
8.1 ± 0.6
44 ± 4
-7.6
Integrin beta-3, cytoplasmic domain, monophosphorylated (747pY)
2ljf
Homo sapiens
Eukaryo. plasma
1
0
0.6 ± 1.6
62 ± 14
-1.8
Integrin beta-3, transmembrane helix
2rmz
Homo sapiens
Eukaryo. plasma
1
1
30.0 ± 3.6
49 ± 2
-36.0
Integrin beta-3/alpha-V complex
3ije
Homo sapiens
Eukaryo. plasma
2
0
6.1 ± 2.1
13 ± 14
-9.0
Copyright © 2005-2013
Andrei Lomize
,
Mikhail Lomize
and
Irina Pogozheva
University of Michigan, Ann Arbor, MI 48109 USA