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|
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PDB ID or protein name
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LIPID COMPOSITION ATLAS
Protein Classification
Types
(3 types)
Classes
(11 classes)
Superfamilies
(392 superfamilies)
Families
(667 families)
Species
(538 species)
Localization
(24 types)
All proteins in OPM
(2172 proteins)
Protein Links
PDB Sum
,
PDB
,
OCA
,
MPKS
,
PDBTM
,
MPDB
,
CGDB
Type:
3. Peptides
(4 classes)
Class:
3.1. Alpha-helical peptides
(32 superfamilies)
Superfamily:
3.1.03. Membrane anchor helices of peripheral proteins
(5 families)
Family:
3.1.03.03. Membrane-binding domain of phosphotransferase IIA component
PF00358
,
PDBsum
Anticancer peptide designed based on the helix of phosphotransferase IIA
Designed proteins
(
1vm2
, 1vm3, 1vm4)
Membrane-bound helix of phosphotransferase IIA component
Escherichia coli
(
1o53
)
See list of these PDB codes
3.1.03.03. Membrane-binding domain of phosphotransferase IIA component
PF00358
,
PDBsum
(2 proteins)
Protein Name
PDB ID
Species
Localization
Num. Subunits
Num. TM Sec. Structs.
Hydrophobic Thickness or Depth (Å)
Tilt Angle (°)
ΔG
transfer
(kcal/mol)
Anticancer peptide designed based on the helix of phosphotransferase IIA
1vm2
Designed proteins
Undefined
1
0
7.0 ± 1.8
78 ± 15
-12.0
Membrane-bound helix of phosphotransferase IIA component
1o53
Escherichia coli
Bact. Gram-neg inner
1
0
3.3 ± 1.3
86 ± 15
-7.8
Copyright © 2005-2013
Andrei Lomize
,
Mikhail Lomize
and
Irina Pogozheva
University of Michigan, Ann Arbor, MI 48109 USA