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PDB ID or protein name
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LIPID COMPOSITION ATLAS
Protein Classification
Types
(3 types)
Classes
(11 classes)
Superfamilies
(392 superfamilies)
Families
(667 families)
Species
(538 species)
Localization
(24 types)
All proteins in OPM
(2172 proteins)
Protein Links
PDB Sum
,
PDB
,
OCA
,
MPKS
,
PDBTM
,
MPDB
,
CGDB
Type:
2. Monotopic/peripheral
(4 classes)
Class:
2.1. All alpha monotopic/peripheral
(60 superfamilies)
Superfamily:
2.1.07. Multiheme cytochrome
(1 family)
Family:
2.1.07.01. Class III cytochrome C
PF02085
,
PDBsum
Decaheme cytochrome c MtrF
Shewanella oneidensis
(
3pmq
)
Nonaheme cytochrome c
Desulfovibrio desulfuricans
(
1duw
)
See list of these PDB codes
2.1.07.01. Class III cytochrome C
PF02085
,
PDBsum
(2 proteins)
Protein Name
PDB ID
Species
Localization
Num. Subunits
Num. TM Sec. Structs.
Hydrophobic Thickness or Depth (Å)
Tilt Angle (°)
ΔG
transfer
(kcal/mol)
Decaheme cytochrome c MtrF
3pmq
Shewanella oneidensis
Bact. Gram-neg outer
1
0
3.9 ± 0.9
86 ± 2
-6.2
Nonaheme cytochrome c
1duw
Desulfovibrio desulfuricans
Bact. Gram-neg inner
1
0
5.1 ± 0.4
87 ± 10
-4.9
Copyright © 2005-2013
Andrei Lomize
,
Mikhail Lomize
and
Irina Pogozheva
University of Michigan, Ann Arbor, MI 48109 USA