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PDB ID or protein name
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LIPID COMPOSITION ATLAS
Protein Classification
Types
(3 types)
Classes
(11 classes)
Superfamilies
(392 superfamilies)
Families
(667 families)
Species
(538 species)
Localization
(24 types)
All proteins in OPM
(2172 proteins)
Protein Links
PDB Sum
,
PDB
,
OCA
,
MPKS
,
PDBTM
,
MPDB
,
CGDB
Type:
3. Peptides
(4 classes)
Class:
3.1. Alpha-helical peptides
(32 superfamilies)
Superfamily:
3.1.06. Apolipoprotein peptides
(2 families)
Family:
3.1.06.02. Designed apolipoprotein-like peptides
Amphipathic alpha-helix of apolipoprotein
Designed proteins
(
2irg
)
Class A amphipathic helical peptide
Designed proteins
(
2fq5
, 2fq8)
See list of these PDB codes
3.1.06.02. Designed apolipoprotein-like peptides (2 proteins)
Protein Name
PDB ID
Species
Localization
Num. Subunits
Num. TM Sec. Structs.
Hydrophobic Thickness or Depth (Å)
Tilt Angle (°)
ΔG
transfer
(kcal/mol)
Amphipathic alpha-helix of apolipoprotein
2irg
Designed proteins
Undefined
1
0
6.4 ± 1.7
83 ± 15
-12.1
Class A amphipathic helical peptide
2fq5
Designed proteins
Undefined
1
0
6.5 ± 1.4
78 ± 6
-8.8
Copyright © 2005-2013
Andrei Lomize
,
Mikhail Lomize
and
Irina Pogozheva
University of Michigan, Ann Arbor, MI 48109 USA