UNIVERSITY OF MICHIGAN
|
COLLEGE OF PHARMACY
|
MOSBERG LAB
PDB ID or protein name
HOME
ABOUT OPM
DOWNLOAD OPM FILES
CONTACT US
PPM SERVER
LIPID COMPOSITION ATLAS
Protein Classification
Types
(3 types)
Classes
(11 classes)
Superfamilies
(392 superfamilies)
Families
(667 families)
Species
(538 species)
Localization
(24 types)
All proteins in OPM
(2172 proteins)
Protein Links
PDB Sum
,
PDB
,
OCA
,
MPKS
,
PDBTM
,
MPDB
,
CGDB
Type:
1. Transmembrane
(3 classes)
Class:
1.1. Alpha-helical polytopic
(72 superfamilies)
Superfamily:
1.1.64. Sodium/calcium exchanger
(1 family)
2.A.19 (TCDB)
Family:
1.1.64.01. Sodium/calcium exchanger
2.A.19 (TCDB)
PF01699
,
PDBsum
Sodium/calcium exchanger
Methanococcus jannaschii
(
3v5u
)
Sodium/calcium exchanger, different conformation
Methanococcus jannaschii
(
3v5s
)
See list of these PDB codes
1.1.64.01. Sodium/calcium exchanger
2.A.19 (TCDB)
PF01699
,
PDBsum
(2 proteins)
Protein Name
PDB ID
Species
Localization
Num. Subunits
Num. TM Sec. Structs.
Hydrophobic Thickness or Depth (Å)
Tilt Angle (°)
ΔG
transfer
(kcal/mol)
Sodium/calcium exchanger
3v5u
Methanococcus jannaschii
Archaebac.
1
10
29.8 ± 0.9
3 ± 0
-78.4
Sodium/calcium exchanger, different conformation
3v5s
Methanococcus jannaschii
Archaebac.
1
10
29.6 ± 1.6
1 ± 2
-75.1
Copyright © 2005-2013
Andrei Lomize
,
Mikhail Lomize
and
Irina Pogozheva
University of Michigan, Ann Arbor, MI 48109 USA