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PDB ID or protein name
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LIPID COMPOSITION ATLAS
Protein Classification
Types
(3 types)
Classes
(11 classes)
Superfamilies
(392 superfamilies)
Families
(667 families)
Species
(538 species)
Localization
(24 types)
All proteins in OPM
(2172 proteins)
Protein Links
PDB Sum
,
PDB
,
OCA
,
MPKS
,
PDBTM
,
MPDB
,
CGDB
Type:
3. Peptides
(4 classes)
Class:
3.1. Alpha-helical peptides
(32 superfamilies)
Superfamily:
3.1.24. Penaeidin (1 family)
PF05927
,
PDBsum
Family:
3.1.24.01.
Penaeidin
PF05927
,
PDBsum
Penaeidin-3a
Litopenaeus vannamei (Whiteleg shrimp)
(
1ueo
)
Penaeidin-4d
Litopenaeus setiferus (Atlantic white shrimp)
(
1xv3
)
See list of these PDB codes
3.1.24. Penaeidin (1 family)
PF05927
,
PDBsum
(2 proteins)
Family
Protein Name
PDB ID
Species
Localization
Num. Subunits
Num. TM Sec. Structs.
Hydrophobic Thickness or Depth (Å)
Tilt Angle (°)
ΔG
transfer
(kcal/mol)
3.1.24.01.
Penaeidin-3a
1ueo
Litopenaeus vannamei (Whiteleg shrimp)
Secreted
1
0
1.3 ± 3.5
89 ± 2
-5.5
3.1.24.01.
Penaeidin-4d
1xv3
Litopenaeus setiferus (Atlantic white shrimp)
Secreted
1
0
3.4 ± 2.7
76 ± 17
-7.8
Copyright © 2005-2013
Andrei Lomize
,
Mikhail Lomize
and
Irina Pogozheva
University of Michigan, Ann Arbor, MI 48109 USA