UNIVERSITY OF MICHIGAN
|
COLLEGE OF PHARMACY
|
MOSBERG LAB
PDB ID or protein name
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LIPID COMPOSITION ATLAS
Protein Classification
Types
(3 types)
Classes
(11 classes)
Superfamilies
(393 superfamilies)
Families
(668 families)
Species
(539 species)
Localization
(24 types)
All proteins in OPM
(2185 proteins)
Protein Links
PDB Sum
,
PDB
,
OCA
,
MPKS
,
PDBTM
,
MPDB
,
CGDB
Type:
3. Peptides
(4 classes)
Class:
3.1. Alpha-helical peptides
(32 superfamilies)
Superfamily:
3.1.15. Bacteriocin, class IIa
(4 families)
Family:
3.1.15.03. Plantaricin EF
1.C.29 (TCDB)
Bacteriocin peptide plantaricin E (PlnE)
Lactobacillus plantarum
(
2jui
)
Bacteriocin peptide plantaricin F (PlnF)
Lactobacillus plantarum
(
2rlw
)
See list of these PDB codes
3.1.15.03. Plantaricin EF
1.C.29 (TCDB)
(2 proteins)
Protein Name
PDB ID
Species
Localization
Num. Subunits
Num. TM Sec. Structs.
Hydrophobic Thickness or Depth (Å)
Tilt Angle (°)
ΔG
transfer
(kcal/mol)
Bacteriocin peptide plantaricin E (PlnE)
2jui
Lactobacillus plantarum
Secreted
1
0
4.3 ± 4.2
79 ± 4
-5.0
Bacteriocin peptide plantaricin F (PlnF)
2rlw
Lactobacillus plantarum
Secreted
1
0
8.7 ± 4.4
79 ± 5
-11.7
Copyright © 2005-2013
Andrei Lomize
,
Mikhail Lomize
and
Irina Pogozheva
University of Michigan, Ann Arbor, MI 48109 USA