UNIVERSITY OF MICHIGAN
|
COLLEGE OF PHARMACY
|
MOSBERG LAB
PDB ID or protein name
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LIPID COMPOSITION ATLAS
Protein Classification
Types
(3 types)
Classes
(11 classes)
Superfamilies
(392 superfamilies)
Families
(667 families)
Species
(538 species)
Localization
(24 types)
All proteins in OPM
(2172 proteins)
Protein Links
PDB Sum
,
PDB
,
OCA
,
MPKS
,
PDBTM
,
MPDB
,
CGDB
Type:
3. Peptides
(4 classes)
Class:
3.1. Alpha-helical peptides
(32 superfamilies)
Superfamily:
3.1.10. Alpha-helical bacterial pheromones (1 family)
Family:
3.1.10.01.
Streptococcal competence stimulating peptide
PF03047
,
PDBsum
Competence stimulating peptide
Streptococcus mutants
(
2i2h
, 2i2j)
Competence-stimulating peptide type 1
Streptococcus pneumoniae
(
2a1c
)
See list of these PDB codes
3.1.10. Alpha-helical bacterial pheromones (1 family) (2 proteins)
Family
Protein Name
PDB ID
Species
Localization
Num. Subunits
Num. TM Sec. Structs.
Hydrophobic Thickness or Depth (Å)
Tilt Angle (°)
ΔG
transfer
(kcal/mol)
3.1.10.01.
Competence stimulating peptide
2i2h
Streptococcus mutants
Secreted
1
0
8.2 ± 0.5
74 ± 7
-12.5
3.1.10.01.
Competence-stimulating peptide type 1
2a1c
Streptococcus pneumoniae
Secreted
1
0
4.8 ± 0.9
85 ± 20
-7.7
Copyright © 2005-2013
Andrei Lomize
,
Mikhail Lomize
and
Irina Pogozheva
University of Michigan, Ann Arbor, MI 48109 USA