UNIVERSITY OF MICHIGAN
|
COLLEGE OF PHARMACY
|
MOSBERG LAB
PDB ID or protein name
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LIPID COMPOSITION ATLAS
Protein Classification
Types
(3 types)
Classes
(11 classes)
Superfamilies
(392 superfamilies)
Families
(667 families)
Species
(538 species)
Localization
(24 types)
All proteins in OPM
(2172 proteins)
Protein Links
PDB Sum
,
PDB
,
OCA
,
MPKS
,
PDBTM
,
MPDB
,
CGDB
Type:
1. Transmembrane
(3 classes)
Class:
1.2. Alpha-helical bitopic
(42 superfamilies)
Superfamily:
1.2.18. Sortase (1 family)
PF04203
,
PDBsum
Family:
1.2.18.01.
Sortase
PF04203
,
PDBsum
Putative sortase
Streptococcus pneumoniae
(
2wts
, 2w1j)
Sortase B
Bacillus anthracis
(
1rz2
, 2oqw, 2oqz)
See list of these PDB codes
1.2.18. Sortase (1 family)
PF04203
,
PDBsum
(2 proteins)
Family
Protein Name
PDB ID
Species
Localization
Num. Subunits
Num. TM Sec. Structs.
Hydrophobic Thickness or Depth (Å)
Tilt Angle (°)
ΔG
transfer
(kcal/mol)
1.2.18.01.
Putative sortase
2wts
Streptococcus pneumoniae
Bact. Gram-pos plas.
1
0
5.1 ± 1.0
20 ± 3
-4.6
1.2.18.01.
Sortase B
1rz2
Bacillus anthracis
Bact. Gram-pos plas.
1
0
3.0 ± 0.6
82 ± 6
-5.8
Copyright © 2005-2013
Andrei Lomize
,
Mikhail Lomize
and
Irina Pogozheva
University of Michigan, Ann Arbor, MI 48109 USA