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PDB ID or protein name
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LIPID COMPOSITION ATLAS
Protein Classification
Types
(3 types)
Classes
(11 classes)
Superfamilies
(393 superfamilies)
Families
(668 families)
Species
(539 species)
Localization
(24 types)
All proteins in OPM
(2185 proteins)
Protein Links
PDB Sum
,
PDB
,
OCA
,
MPKS
,
PDBTM
,
MPDB
,
CGDB
Type:
2. Monotopic/peripheral
(4 classes)
Class:
2.3. Alpha/Beta monotopic/peripheral
(33 superfamilies)
Superfamily:
2.3.10. UDP-Glycosyltransferase/glycogen phosphorylase (5 families)
CL0113
,
PDBsum
Family:
2.3.10.01.
Glycosyltransferase family 28
PF03033
,
PDBsum
Glycosyltransferase GtfA
Amycolatopsis orientalis (Nocardia orientalis)
(
1pn3
, 1pnv, 3h4i, 3h4t)
Peptidoglycan biosynthesis glycosyltransferase MurG
Escherichia coli
(
1f0k
, 1nlm)
Escherichia coli
(
1nlm
, 1f0k)
Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase
Pseudomonas aeruginosa
(
3s2u
)
2.3.10.03.
Glycosyltransferase family 9
PF01075
,
PDBsum
Heptosyltransferase WaaC
Escherichia coli
(
2h1h
, 2gt1, 2h1f)
LPS heptosyltransferase II
Escherichia coli
(
1psw
)
2.3.10.02.
Glycosyltransferase family 70
Beta-1,2-glucuronosyltrnansferase GumK
Xanthomonas campestris
(
2q6v
, 2hy7, 3cuy, 3cv3)
2.3.10.04.
Glycosyltransferase family 2
PF00535
,
PDBsum
Teichoic acid biosynthesis protein F
Staphylococcus epidermidis
(
3l7l
, 3l7i, 3l7j, 3l7k, 3l7m)
2.3.10.05.
Glycosyltransferase family 30
PF04413
,
PDBsum
3-Deoxy-D-manno-octulosonic-acid transferase, WaaA
Aquifex aeolicus
(
2xci
, 2xcu)
See list of these PDB codes
2.3.10. UDP-Glycosyltransferase/glycogen phosphorylase (5 families)
CL0113
,
PDBsum
(9 proteins)
Family
Protein Name
PDB ID
Species
Localization
Num. Subunits
Num. TM Sec. Structs.
Hydrophobic Thickness or Depth (Å)
Tilt Angle (°)
ΔG
transfer
(kcal/mol)
2.3.10.01.
Peptidoglycan biosynthesis glycosyltransferase MurG
1f0k
Escherichia coli
Bact. Gram-neg inner
1
0
5.3 ± 1.2
55 ± 7
-8.6
2.3.10.01.
Glycosyltransferase GtfA
1pn3
Amycolatopsis orientalis (Nocardia orientalis)
Undefined
1
0
7.2 ± 1.0
80 ± 5
-7.7
2.3.10.01.
Peptidoglycan biosynthesis glycosyltransferase MurG
1nlm
Escherichia coli
Bact. Gram-neg inner
1
0
4.8 ± 1.1
50 ± 7
-7.5
2.3.10.01.
Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase
3s2u
Pseudomonas aeruginosa
Bact. Gram-neg inner
1
0
6.8 ± 0.9
60 ± 2
-8.3
2.3.10.02.
Beta-1,2-glucuronosyltrnansferase GumK
2q6v
Xanthomonas campestris
Bact. Gram-neg inner
1
0
5.2 ± 1.0
61 ± 8
-9.5
2.3.10.03.
Heptosyltransferase WaaC
2h1h
Escherichia coli
Bact. Gram-neg inner
1
0
5.0 ± 1.1
67 ± 5
-9.1
2.3.10.03.
LPS heptosyltransferase II
1psw
Escherichia coli
Bact. Gram-neg inner
1
0
3.1 ± 1.1
58 ± 8
-5.6
2.3.10.04.
Teichoic acid biosynthesis protein F
3l7l
Staphylococcus epidermidis
Bact. Gram-pos plas.
1
0
6.9 ± 2.0
35 ± 15
-10.8
2.3.10.05.
3-Deoxy-D-manno-octulosonic-acid transferase, WaaA
2xci
Aquifex aeolicus
Bact. Gram-neg outer
1
0
8.3 ± 1.5
72 ± 1
-20.3
Copyright © 2005-2013
Andrei Lomize
,
Mikhail Lomize
and
Irina Pogozheva
University of Michigan, Ann Arbor, MI 48109 USA