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PDB ID or protein name
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LIPID COMPOSITION ATLAS
Protein Classification
Types
(3 types)
Classes
(11 classes)
Superfamilies
(392 superfamilies)
Families
(667 families)
Species
(538 species)
Localization
(24 types)
All proteins in OPM
(2172 proteins)
Protein Links
PDB Sum
,
PDB
,
OCA
,
MPKS
,
PDBTM
,
MPDB
,
CGDB
Type:
2. Monotopic/peripheral
(4 classes)
Class:
2.3. Alpha/Beta monotopic/peripheral
(33 superfamilies)
Superfamily:
2.3.18. CoA-dependent acyltransferases (2 families)
CL0149
,
PDBsum
Family:
2.3.18.01.
Choline/carnitine O-acyltransferases
PF00755
,
PDBsum
Carnitine O-acetyltransferase
Mus musculus
(
1ndb
, 1ndf, 1ndi, 1t7n, 1t7o, 1t7q, 2h3p, 2h3u, 2h3w)
Carnitine O-acetyltransferase, complex with substrate
Mus musculus
(
2h3u
)
Carnitine O-octanoyltransferase
Homo sapiens
(
1nm8
, 1s5o)
Carnitine O-palmitoyltransferase 1, liver isoform, N-terminal domain
Homo sapiens
(
2le3
)
Carnitine O-palmitoyltransferase 2
Rattus norvegicus
(
2h4t
, 2deb, 2fw3, 2fyo, 2rcu, 4ep9, 4eph, 4eyw)
Choline O-acetyltransferase
Homo sapiens
(
2fy2
, 2fy3, 2fy4, 2fy5)
Rattus norvegicus
(
1q6x
, 1t1u)
Choline O-acetyltransferase, different conformation
Rattus norvegicus
(
1t1u
, 1q6x)
2.3.18.02.
Condensation domain
PF00668
,
PDBsum
Phthiocerol/phthiodiolone dimycocerosyl transferase
Mycobacterium tuberculosis
(
1q9j
)
See list of these PDB codes
2.3.18. CoA-dependent acyltransferases (2 families)
CL0149
,
PDBsum
(9 proteins)
Family
Protein Name
PDB ID
Species
Localization
Num. Subunits
Num. TM Sec. Structs.
Hydrophobic Thickness or Depth (Å)
Tilt Angle (°)
ΔG
transfer
(kcal/mol)
2.3.18.01.
Choline O-acetyltransferase
2fy2
Homo sapiens
Eukaryo. plasma
1
0
1.5 ± 2.2
87 ± 17
-5.2
2.3.18.01.
Choline O-acetyltransferase
1q6x
Rattus norvegicus
Eukaryo. plasma
1
0
3.6 ± 0.6
75 ± 6
-8.5
2.3.18.01.
Choline O-acetyltransferase, different conformation
1t1u
Rattus norvegicus
Eukaryo. plasma
1
0
2.1 ± 1.7
73 ± 15
-6.8
2.3.18.01.
Carnitine O-palmitoyltransferase 2
2h4t
Rattus norvegicus
Mitochon. inner
1
0
4.0 ± 1.2
67 ± 10
-9.4
2.3.18.01.
Carnitine O-acetyltransferase
1ndb
Mus musculus
Mitochon. inner
1
0
3.0 ± 0.9
85 ± 6
-7.6
2.3.18.01.
Carnitine O-octanoyltransferase
1nm8
Homo sapiens
Mitochon. inner
1
0
1.7 ± 3.0
67 ± 15
-5.3
2.3.18.01.
Carnitine O-acetyltransferase, complex with substrate
2h3u
Mus musculus
Mitochon. inner
1
0
3.0 ± 1.0
87 ± 3
-5.9
2.3.18.01.
Carnitine O-palmitoyltransferase 1, liver isoform, N-terminal domain
2le3
Homo sapiens
Mitochon. outer
1
0
3.9 ± 3.7
80 ± 3
-9.3
2.3.18.02.
Phthiocerol/phthiodiolone dimycocerosyl transferase
1q9j
Mycobacterium tuberculosis
Bact. Gram-pos cell wall
1
0
6.7 ± 2.2
25 ± 6
-5.2
Copyright © 2005-2013
Andrei Lomize
,
Mikhail Lomize
and
Irina Pogozheva
University of Michigan, Ann Arbor, MI 48109 USA