PDB ID or protein name
See list of these PDB codes

1.3.19. OprD/AlgE superfamily (n=18,S=22) (2 families) (19 proteins)

Family Protein Name PDB ID Species Localization Num. Subunits Num. TM Sec. Structs. Hydrophobic Thickness or Depth (Å) Tilt Angle (°) ΔGtransfer (kcal/mol)
1.3.19.01. Outer membrane porin OprD 2odj Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 23.0 ± 0.8 8 ± 0 -63.1
1.3.19.01. Protein OpdK 2qtk Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 23.3 ± 1.0 3 ± 0 -62.4
1.3.19.01. BenF-like porin 3jty Pseudomonas fluorescens Bact. Gram-neg outer 1 18 24.2 ± 1.2 1 ± 0 -59.8
1.3.19.01. Outer membrane porin OpdL 2y0h Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 23.0 ± 1.0 3 ± 0 -55.7
1.3.19.01. Pyroglutamate porin OpdO 2y0k Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 23.8 ± 1.2 1 ± 0 -55.8
1.3.19.01. Cis-aconitate porin OpdH 2y0l Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 21.4 ± 1.5 6 ± 1 -57.2
1.3.19.01. Histidine porin OpdC 3sy9 Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 23.4 ± 0.8 5 ± 0 -63.2
1.3.19.01. Glycine-glutamate dipeptide porin OpdP 3syb Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 23.6 ± 0.9 8 ± 0 -62.0
1.3.19.01. Porin OpdF 3szd Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 22.0 ± 1.6 3 ± 0 -60.3
1.3.19.01. Porin OpdQ 3t24 Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 23.0 ± 1.3 2 ± 0 -56.5
1.3.19.01. Outer membrane porin OprD, different conformation of loops 3sy7 Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 23.8 ± 1.1 4 ± 2 -63.5
1.3.19.01. Porin OprdG 4ft6 Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 23.4 ± 1.4 4 ± 0 -62.4
1.3.19.01. Porin OprdD 4frt Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 20.4 ± 1.4 5 ± 1 -48.5
1.3.19.01. Porin OprE 4frx Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 22.0 ± 1.5 6 ± 0 -55.3
1.3.19.01. Porin OpdN 4fso Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 21.8 ± 2.2 7 ± 1 -61.3
1.3.19.01. Porin OpdR 4fsp Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 22.6 ± 1.2 3 ± 0 -59.6
1.3.19.02. Alginate export protein, AlgE 3rbh Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 23.4 ± 1.2 4 ± 0 -72.0
1.3.19.02. Alginate export protein, AlgE, different conformation of loops 4afk Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 24.8 ± 0.9 3 ± 0 -73.0
1.3.19.02. Alginate export protein, AlgE, in meso structure 4b61 Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 24.0 ± 1.1 5 ± 1 -73.2