UNIVERSITY OF MICHIGAN
|
COLLEGE OF PHARMACY
|
MOSBERG LAB
PDB ID or protein name
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LIPID COMPOSITION ATLAS
Protein Classification
Types
(3 types)
Classes
(11 classes)
Superfamilies
(392 superfamilies)
Families
(667 families)
Species
(538 species)
Localization
(24 types)
All proteins in OPM
(2172 proteins)
Protein Links
PDB Sum
,
PDB
,
OCA
,
MPKS
,
PDBTM
,
MPDB
,
CGDB
Type:
2. Monotopic/peripheral
(4 classes)
Class:
2.1. All alpha monotopic/peripheral
(60 superfamilies)
Superfamily:
2.1.37. DBL (Duffy-binding like) (1 family)
CL0195
,
PDBsum
Family:
2.1.37.01.
PfEMP1 (Plasmodium falciparum erythrocyte membrane protein)
PF03011
,
PDBsum
Erythrocyte membrane protein 1
Plasmodium falciparum
(
2xu0
)
Erythrocyte membrane protein 1 variant
Plasmodium falciparum
(
3c64
)
See list of these PDB codes
2.1.37. DBL (Duffy-binding like) (1 family)
CL0195
,
PDBsum
(2 proteins)
Family
Protein Name
PDB ID
Species
Localization
Num. Subunits
Num. TM Sec. Structs.
Hydrophobic Thickness or Depth (Å)
Tilt Angle (°)
ΔG
transfer
(kcal/mol)
2.1.37.01.
Erythrocyte membrane protein 1
2xu0
Plasmodium falciparum
Eukaryo. plasma
1
0
3.3 ± 6.0
75 ± 45
-3.2
2.1.37.01.
Erythrocyte membrane protein 1 variant
3c64
Plasmodium falciparum
Eukaryo. plasma
1
0
5.3 ± 2.5
52 ± 3
-9.6
Copyright © 2005-2013
Andrei Lomize
,
Mikhail Lomize
and
Irina Pogozheva
University of Michigan, Ann Arbor, MI 48109 USA