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PDB ID or protein name
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LIPID COMPOSITION ATLAS
Protein Classification
Types
(3 types)
Classes
(11 classes)
Superfamilies
(392 superfamilies)
Families
(667 families)
Species
(538 species)
Localization
(24 types)
All proteins in OPM
(2172 proteins)
Protein Links
PDB Sum
,
PDB
,
OCA
,
MPKS
,
PDBTM
,
MPDB
,
CGDB
Type:
1. Transmembrane
(3 classes)
Class:
1.3. Beta-barrel transmembrane
(26 superfamilies)
Superfamily:
1.3.04. Lipid A acylation (n=8,S=10) (1 family)
PF07017
,
PDBsum
Family:
1.3.04.03.
Lipid A acylation
PF07017
,
PDBsum
Lipid A acylase PagP
Escherichia coli
(
3gp6
, 1mm4, 1mm5)
Lipid A acylase PagP, different conformation of loops
Escherichia coli
(
1thq
)
See list of these PDB codes
1.3.04. Lipid A acylation (n=8,S=10) (1 family)
PF07017
,
PDBsum
(2 proteins)
Family
Protein Name
PDB ID
Species
Localization
Num. Subunits
Num. TM Sec. Structs.
Hydrophobic Thickness or Depth (Å)
Tilt Angle (°)
ΔG
transfer
(kcal/mol)
1.3.04.03.
Lipid A acylase PagP
3gp6
Escherichia coli
Bact. Gram-neg outer
1
8
24.7 ± 1.5
40 ± 1
-32.5
1.3.04.03.
Lipid A acylase PagP, different conformation of loops
1thq
Escherichia coli
Bact. Gram-neg outer
1
8
23.4 ± 2.5
27 ± 3
-31.3
Copyright © 2005-2013
Andrei Lomize
,
Mikhail Lomize
and
Irina Pogozheva
University of Michigan, Ann Arbor, MI 48109 USA