UNIVERSITY OF MICHIGAN
|
COLLEGE OF PHARMACY
|
LOMIZE GROUP
PDB ID or protein name
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LIPID COMPOSITION ATLAS
Protein Classification
Types
(3 types)
Classes
(11 classes)
Superfamilies
(481 superfamilies)
Families
(903 families)
Species
(772 species)
Localization
(24 types)
All proteins in OPM
(3809 proteins)
Protein Links
PDB Sum
,
PDB
,
OCA
,
MPKS
,
PDBTM
,
MPDB
,
CGDB
Type:
1. Transmembrane
(3 classes)
Class:
1.3. Beta-barrel transmembrane
(32 superfamilies)
Superfamily:
1.3.008. OM adhesion protein (n=10,S=12) (1 family)
PF07239
,
PDBsum
Family:
1.3.08.01.
OM adhesion protein OpcA
PF07239
,
PDBsum
Outer membrane adhesin/invasin OpcA
Neisseria meningitidis
(
1k24
)
Outer membrane adhesin/invasin OpcA, disordered loops
Neisseria meningitidis
(
2vdf
)
See list of these PDB codes
1.3.008. OM adhesion protein (n=10,S=12) (1 family)
PF07239
,
PDBsum
(2 proteins)
Family
Protein Name
PDB ID
Species
Localization
Num. Subunits
Num. TM Sec. Structs.
Hydrophobic Thickness or Depth (Å)
Tilt Angle (°)
ΔG
transfer
(kcal/mol)
1.3.08.01.
Outer membrane adhesin/invasin OpcA
1k24
Neisseria meningitidis
Bact. Gram-neg outer
1
10
25.4 ± 1.3
10 ± 11
-41.7
1.3.08.01.
Outer membrane adhesin/invasin OpcA, disordered loops
2vdf
Neisseria meningitidis
Bact. Gram-neg outer
1
10
24.8 ± 1.2
8 ± 0
-47.0
Copyright © 2005-2013
Andrei Lomize
,
Mikhail Lomize
and
Irina Pogozheva
University of Michigan, Ann Arbor, MI 48109 USA