PDB ID or protein name
See list of these PDB codes

1.3.016. Trimeric porins (n=16,S=20) (4 families) (31 proteins)

Family Protein Name PDB ID Species Localization Num. Subunits Num. TM Sec. Structs. Hydrophobic Thickness or Depth (Å) Tilt Angle (°) ΔGtransfer (kcal/mol)
1.3.16.01. Porin 1, structure 2 5nxn Providencia stuartii Bact. Gram-neg outer 3 48 24.2 ± 1.2 0 ± 0 -129.8
1.3.16.01. Osmoporin OMPC 3upg Salmonella typhimurium Bact. Gram-neg outer 3 48 23.4 ± 0.7 0 ± 0 -118.0
1.3.16.01. OmpT major porin, structure 1 6ehf Vibrio cholerae Bact. Gram-neg outer 3 48 23.4 ± 0.8 0 ± 0 -130.3
1.3.16.01. Phosphoporin (PhoE) 1pho Escherichia coli Bact. Gram-neg outer 3 48 24.1 ± 1.2 0 ± 0 -134.1
1.3.16.01. Porin B (PorB), different strain 3wi4 Neisseria meningitidis Bact. Gram-neg outer 3 48 23.4 ± 0.6 0 ± 0 -112.6
1.3.16.01. OmpT major porin, structure 2 6ehe Vibrio cholerae Bact. Gram-neg outer 1 16 22.6 ± 0.8 6 ± 0 -54.1
1.3.16.01. Osmoporin OMPC 2j1n Escherichia coli Bact. Gram-neg outer 3 48 25.1 ± 1.2 0 ± 2 -126.2
1.3.16.01. Porin B (PorB), different strain, conformation 2 3wi5 Neisseria meningitidis Bact. Gram-neg outer 3 48 25.4 ± 0.9 0 ± 0 -117.2
1.3.16.01. OmpT major porin, structure 3 5oyk Vibrio cholerae Bact. Gram-neg outer 1 16 23.0 ± 1.0 6 ± 0 -52.2
1.3.16.01. OmpU major porin, structure 1 6ehb Vibrio cholerae Bact. Gram-neg outer 3 48 23.8 ± 0.4 1 ± 0 -117.5
1.3.16.01. Osmoporin OMPC, isoform 1 2ixx Escherichia coli Bact. Gram-neg outer 3 48 26.2 ± 1.3 0 ± 1 -142.5
1.3.16.01. Porin 1, structure 1 5nxr Providencia stuartii Bact. Gram-neg outer 3 48 25.0 ± 1.4 0 ± 0 -131.8
1.3.16.01. OmpU major porin, structure 2 6ehc Vibrio cholerae Bact. Gram-neg outer 3 48 23.8 ± 0.4 0 ± 0 -125.1
1.3.16.01. Osmoporin OMPC, isoform 2 2ixw Escherichia coli Bact. Gram-neg outer 3 48 24.5 ± 1.0 0 ± 0 -121.0
1.3.16.01. Porin 2 4d65 Providencia stuartii Bact. Gram-neg outer 3 48 24.4 ± 1.0 0 ± 0 -129.2
1.3.16.01. Porin B (PorB) 3a2s Neisseria meningitidis Bact. Gram-neg outer 3 48 24.4 ± 1.0 0 ± 0 -102.1
1.3.16.01. OmpC porin 5fvn Enterobacter cloacae Bact. Gram-neg outer 3 48 23.2 ± 0.6 0 ± 0 -124.2
1.3.16.01. Porin OmpF 3pox Escherichia coli Bact. Gram-neg outer 3 48 24.0 ± 0.8 0 ± 0 -136.2
1.3.16.01. Porin OmpF 3nsg Salmonella enterica Bact. Gram-neg outer 3 48 23.6 ± 0.8 0 ± 0 -123.4
1.3.16.01. Chitoporin, structure 1 5mdr Vibrio harveyi Bact. Gram-neg outer 3 48 23.8 ± 0.6 0 ± 0 -117.8
1.3.16.01. Outer membrane protein C 1osm Klebsiella pneumoniae Bact. Gram-neg outer 3 48 24.0 ± 1.1 0 ± 0 -136.6
1.3.16.01. Porin B (PorB) 4aui Neisseria gonorrhoeae Bact. Gram-neg outer 3 48 24.2 ± 0.8 0 ± 0 -89.7
1.3.16.01. Chitoporin, structure 2 5mdq Vibrio harveyi Bact. Gram-neg outer 3 48 24.2 ± 0.6 0 ± 0 -122.4
1.3.16.01. Anion-selective porin 2fgq Comamonas acidovorans Bact. Gram-neg outer 3 48 25.0 ± 0.9 0 ± 0 -130.8
1.3.16.01. Porin OmpU 5onu Vibrio cholerae Bact. Gram-neg outer 3 48 23.8 ± 0.4 0 ± 0 -111.0
1.3.16.02. Porin 3prn Rhodopseudomonas blastica Bact. Gram-neg outer 3 48 23.2 ± 0.5 0 ± 0 -127.6
1.3.16.02. Porin 2por Rhodobacter capsulatus Bact. Gram-neg outer 3 48 23.4 ± 0.6 0 ± 0 -114.8
1.3.16.03. Porin OprP 2o4v Pseudomonas aeruginosa Bact. Gram-neg outer 3 48 23.9 ± 1.1 0 ± 0 -129.6
1.3.16.03. Porin OprO 4rjw Pseudomonas aeruginosa Bact. Gram-neg outer 3 48 25.4 ± 0.7 0 ± 0 -129.0
1.3.16.04. Porin B, low pH structure 4gf4 Pseudomonas putida Bact. Gram-neg outer 1 16 22.4 ± 1.1 5 ± 2 -54.3
1.3.16.04. Porin B 4gey Pseudomonas putida Bact. Gram-neg outer 1 16 24.2 ± 1.6 6 ± 2 -61.3