PDB ID or protein name
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3.1.007. Viral fusion and anchor peptides (10 families) (56 proteins)

Family Protein Name PDB ID Species Localization Num. Subunits Num. TM Sec. Structs. Hydrophobic Thickness or Depth (Å) Tilt Angle (°) ΔGtransfer (kcal/mol)
3.1.07.01. Fusion peptide (507-560) of ebolavirus glycoprotein GP2, wild type 2lcy Zaire ebolavirus Viral 1 0 3.5 ± 2.2 59 ± 9 -4.5
3.1.07.01. Fusion peptide (517-539) of protein gp41 1p5a Human immunodeficiency virus type 1 Endosome 1 1 25.8 ± 5.5 12 ± 3 -9.3
3.1.07.01. Fusion peptide (507-560) of ebolavirus glycoprotein GP2, mutant 1 2mb1 Zaire ebolavirus Viral 1 0 3.8 ± 1.8 53 ± 34 -4.5
3.1.07.01. Fusion peptide (507-560) of ebolavirus glycoprotein GP2, mutant 2 2m5f Zaire ebolavirus Viral 1 0 5.7 ± 1.7 29 ± 30 -5.2
3.1.07.01. Fusion peptide (510-532) of protein gp41 2pjv Human immunodeficiency virus type 1 Endosome 1 0 8.7 ± 3.8 64 ± 4 -10.9
3.1.07.01. Fusion peptide (524-539) of ebolavirus glycoprotein GP2 2rlj Zaire ebolavirus Viral 1 0 5.8 ± 1.8 84 ± 6 -6.8
3.1.07.01. Fusion peptide (772-787) of spike glycoprotein 2rum Human SARS coronavirus Endosome 1 0 11.1 ± 1.1 57 ± 13 -10.8
3.1.07.01. Fusion peptide (1185-1201) of spike glycoprotein 2run Human SARS coronavirus Endosome 1 0 6.8 ± 4.0 74 ± 7 -10.7
3.1.07.01. Fusion peptide (983-887) of spike glycoprotein 2ruo Human SARS coronavirus Endosome 1 0 9.9 ± 4.0 72 ± 6 -9.0
3.1.07.01. Fusion peptide (84-101) from E1 envelope glycoprotein 2rsw Chikungunya virus Endosome 1 0 8.3 ± 0.6 57 ± 7 -6.9
3.1.07.01. Fusion peptide (683-704) of protein gp41 2mg1 Human immunodeficiency virus type 1 Endosome 1 1 30.8 ± 0.5 19 ± 3 -19.4
3.1.07.01. Fusion peptide (671-693) of protein gp41 2mg2 Human immunodeficiency virus type 1 Endosome 1 1 22.2 ± 1.9 34 ± 1 -15.1
3.1.07.01. Probable fusion peptide (93-126, 138-160) of protein gp41 2mk3 Human immunodeficiency virus type 1 Endosome 1 2 20.8 ± 0.5 18 ± 1 -13.2
3.1.07.01. Fusion peptide (512-541) of protein gp41 2ari Human immunodeficiency virus type 1 Endosome 1 0 10.0 ± 1.0 88 ± 9 -16.1
3.1.07.02. Juxtamembrane peptide (665-683) of protein gp41 1jau Human immunodeficiency virus type 1 Endosome 1 0 4.0 ± 4.2 86 ± 2 -8.0
3.1.07.02. Juxtamembrane peptide (662-683) of protein gp160 4g6f Human immunodeficiency virus type 1 Endosome 1 0 4.9 ± 1.4 86 ± 0 -5.0
3.1.07.02. Juxtamembrane peptide (651-677) of protein gp160 2me2 Human immunodeficiency virus type 1 Endosome 1 0 7.0 ± 1.1 82 ± 7 -13.1
3.1.07.02. Juxtamembrane peptide (636-662) of protein gp160 2me3 Human immunodeficiency virus type 1 Endosome 1 0 6.1 ± 0.4 81 ± 7 -12.4
3.1.07.02. Transmembrane domain of HIV-1 gp41 (677-716), trimer 5jyn Human immunodeficiency virus type 1 Viral 3 3 36.0 ± 1.6 0 ± 2 -22.0
3.1.07.02. Juxtamembrane peptide (671-697) of protein gp160 2me4 Human immunodeficiency virus type 1 Endosome 1 0 7.9 ± 2.9 81 ± 4 -14.0
3.1.07.02. Juxtamembrane peptide (662-683) of protein gp41 2pv6 Human immunodeficiency virus type 1 Endosome 1 0 6.7 ± 0.6 82 ± 2 -13.5
3.1.07.02. Membrane proximal peptide of gp41 (95-121) 2ncs Human immunodeficiency virus type 1 Viral 1 0 20.8 ± 2.0 28 ± 3 -14.6
3.1.07.02. Juxtamembrane peptide (684-719) of protein gp41 2kzq Hepatitis C virus Endosome 1 0 4.3 ± 3.3 88 ± 0 -9.9
3.1.07.02. Peptide of envelope glycoprotein H (625-644) 2lqy Human herpesvirus Endosome 1 0 3.2 ± 0.8 88 ± 5 -10.2
3.1.07.02. gp41-M-MAT, a membrane associated MPER trimer 2lp7 Human immunodeficiency virus type 1 Viral 3 3 26.8 ± 0.9 1 ± 1 -14.2
3.1.07.02. Juxtamembrane peptide (657-683) of protein gp160 2me1 Human immunodeficiency virus type 1 Endosome 1 0 7.7 ± 3.8 82 ± 1 -15.0
3.1.07.02. Paramyxovirus sv5 fusion protein core 1svf Simian virus 5 Viral 6 0 8.4 ± 0.9 0 ± 11 -10.7
3.1.07.02. Membrane proximal external helix of HIV-1 gp41 (656-683) 2m8o Human immunodeficiency virus type 1 Viral 1 0 6.0 ± 5.2 90 ± 4 -5.0
3.1.07.02. Juxtamembrane peptide (659-685) of protein gp160 2fx7 Human immunodeficiency virus type 1 Endosome 1 0 6.2 ± 1.0 73 ± 7 -8.0
3.1.07.02. Envelope glycoprotein gp41 2x7r Human immunodeficiency virus type 1 Viral 3 0 5.5 ± 1.1 0 ± 10 -10.9
3.1.07.03. Hemagglutinin, fusion peptide 346-365, wild type 1ibn Influenza virus Viral 1 0 9.1 ± 1.2 67 ± 7 -8.0
3.1.07.03. Hemagglutinin, fusion peptide 346-365, G1S 1xop Influenza virus Viral 1 0 6.3 ± 0.5 70 ± 13 -11.0
3.1.07.03. Hemagglutinin, fusion peptide 346-365, G13A 2l4g Influenza virus Viral 1 0 11.1 ± 0.4 73 ± 4 -10.4
3.1.07.03. Antimicrobial peptide derived from hemagglutinin 2l24 Influenza virus Undefined 1 0 8.7 ± 1.3 75 ± 10 -12.6
3.1.07.03. Hemagglutinin, peptide 330-349, F9A 2jrd Influenza virus Viral 1 0 8.1 ± 4.0 71 ± 5 -6.8
3.1.07.03. Hemagglutinin, fusion peptide 346-365, H1 subtype 2kxa Influenza virus Viral 1 0 10.3 ± 1.9 84 ± 13 -14.5
3.1.07.04. Envelope glycoprotein E1, heterodimerization peptide (350-370) 1emz Hepatitis C virus Viral 1 0 6.2 ± 0.2 86 ± 9 -8.5
3.1.07.04. Juxtamembrane peptide of hepatis C virus E1 glycoprotein (314-342) 2knu Hepatitis C virus Endosome 1 0 5.3 ± 0.9 82 ± 6 -5.9
3.1.07.05. Nonstructural protein 4b, segment 1938-1965 of polyprotein 2kdr Hepatitis C virus Endoplasm. reticulum 1 1 22.4 ± 2.0 48 ± 2 -19.1
3.1.07.05. Nonstructural protein 4b, segment 1751-1780 2jxf Hepatitis C virus Endoplasm. reticulum 1 0 5.6 ± 3.6 85 ± 2 -10.6
3.1.07.05. Nonstructural protein 2a, segment 1194-1221 2m0s Dengue virus Endoplasm. reticulum 1 0 7.4 ± 3.6 79 ± 1 -7.1
3.1.07.05. Nonstructural protein 5b, segment 2982-3011 2n1p Hepatitis C virus Eukaryo. plasma 1 1 24.0 ± 2.5 21 ± 3 -16.1
3.1.07.05. Nonstructural protein, membrane-bound domain 1fw5 Semiliki forest virus Endosome 1 0 7.9 ± 1.5 73 ± 17 -10.2
3.1.07.05. Nonstructural protein 4b, segment 1716-1755 2lvg Hepatitis C virus Viral 1 0 6.4 ± 0.7 82 ± 8 -11.4
3.1.07.05. Nonstructural protein 5a, segment 1973-2003 1r7g Human hepatitis C virus Endoplasm. reticulum 1 0 5.3 ± 0.9 90 ± 5 -15.1
3.1.07.05. Nonstructural protein 5a 2ajo Bovine viral diarrhea virus Endoplasm. reticulum 1 0 5.0 ± 1.0 86 ± 15 -11.8
3.1.07.06. NS2 protease, segment 810-837 of polyprotein 2jy0 Hepatitis C virus Endoplasm. reticulum 1 1 23.8 ± 2.9 14 ± 4 -11.4
3.1.07.06. NS2 protease, segment 869-908 of polyprotein 2kwz Hepatitis C virus Endoplasm. reticulum 1 1 29.8 ± 1.6 59 ± 7 -15.7
3.1.07.06. NS2 protease, segment 836-868 of polyprotein 2kwt Hepatitis C virus Endoplasm. reticulum 1 0 9.5 ± 3.6 81 ± 3 -15.7
3.1.07.06. NS2 protease, segment 734-763 of polyprotein 2lzp Hepatitis GB virus Eukaryo. plasma 1 1 30.8 ± 0.5 32 ± 7 -15.6
3.1.07.06. NS2 protease, segment 845-869 of polyprotein 2mkb Hepatitis GB virus Eukaryo. plasma 1 1 23.2 ± 3.5 30 ± 9 -15.7
3.1.07.06. NS2 protease, segment 766-789 of polyprotein 2lzq Hepatitis GB virus Endoplasm. reticulum 1 0 3.2 ± 2.1 88 ± 1 -5.9
3.1.07.07. Fusion protein p14, FAST 2lx0 Reptilian orthoreovirus Eukaryo. plasma 1 1 27.4 ± 2.3 17 ± 9 -20.2
3.1.07.08. Peptide of outer capsid glycoprotein VP7 (266-326) 2lm7 Rotavirus A Endoplasm. reticulum 1 0 10.2 ± 1.5 76 ± 0 -13.6
3.1.07.09. Membrane fusion protein p15 2mns Baboon orthoreovirus Eukaryo. plasma 1 0 9.3 ± 7.0 86 ± 4 -9.4
3.1.07.10. Structural peptide 1 of bursal disease virus 2imu Avian infectious bursal disease virus Eukaryo. plasma 1 0 11.6 ± 4.0 76 ± 5 -17.5