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|
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|
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PDB ID or protein name
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LIPID COMPOSITION ATLAS
Protein Classification
Types
(3 types)
Classes
(11 classes)
Superfamilies
(481 superfamilies)
Families
(903 families)
Species
(772 species)
Localization
(24 types)
All proteins in OPM
(3809 proteins)
Protein Links
PDB Sum
,
PDB
,
OCA
,
MPKS
,
PDBTM
,
MPDB
,
CGDB
Type:
2. Monotopic/peripheral
(4 classes)
Class:
2.2. All beta monotopic/peripheral
(61 superfamilies)
Superfamily:
2.2.027. C1 domain (1 family)
CL0006
,
PDBsum
Family:
2.2.27.01.
C1 domain
PF00130
,
PDBsum
Beta-chimaerin
Homo sapiens
(
1xa6
)
C1 domain of protein kinase C alpha
Homo sapiens
(
2eli
)
C1 domain of protein kinase C delta
Mus musculus
(
1ptr
, 1ptq, 3uej, 3uey, 3uff, 3ugd, 3ugi, 3ugl)
Homo sapiens
(
2yuu
)
C1 domain of protein kinase C gamma
Rattus rattus
(
1tbn
, 1tbo)
Homo sapiens
(
2e73
)
C1 domain of protein kinase C theta
Mus musculus
(
4fkd
)
Homo sapiens
(
2enn
, 2enz)
C1 domain of unc-13 homolog A
Rattus norvegicus
(
1y8f
)
C1 domanin of SH3 and cysteine-rich domain-containing protein 3
Homo sapiens
(
2db6
)
Diacylglycerol kinase delta
Homo sapiens
(
1r79
)
Kinase supressor of Ras, Ksr
Mus musculus
(
1kbf
, 1kbe)
Rac GTPase-activating protein 1
Homo sapiens
(
4b6d
)
RAF-1 proto-oncogene serine/threonine-protein kinase
Homo sapiens
(
1faq
, 1far)
Ras association domain-containing protein 5, C1 domain
Mus musculus
(
1rfh
, 2fnf)
RAS guanyl-releasing protein 1
Homo sapiens
(
4l9m
)
See list of these PDB codes
2.2.027. C1 domain (1 family)
CL0006
,
PDBsum
(16 proteins)
Family
Protein Name
PDB ID
Species
Localization
Num. Subunits
Num. TM Sec. Structs.
Hydrophobic Thickness or Depth (Å)
Tilt Angle (°)
ΔG
transfer
(kcal/mol)
2.2.27.01.
C1 domain of protein kinase C theta
4fkd
Mus musculus
Eukaryo. plasma
1
0
3.6 ± 0.4
35 ± 2
-8.0
2.2.27.01.
Ras association domain-containing protein 5, C1 domain
1rfh
Mus musculus
Eukaryo. plasma
1
0
1.4 ± 0.9
16 ± 6
-3.7
2.2.27.01.
C1 domain of protein kinase C alpha
2eli
Homo sapiens
Eukaryo. plasma
1
0
2.1 ± 0.4
23 ± 4
-7.4
2.2.27.01.
C1 domain of protein kinase C delta
1ptr
Mus musculus
Eukaryo. plasma
1
0
6.6 ± 1.5
19 ± 8
-5.9
2.2.27.01.
C1 domain of protein kinase C theta
2enn
Homo sapiens
Eukaryo. plasma
1
0
6.2 ± 1.9
89 ± 3
-7.5
2.2.27.01.
Kinase supressor of Ras, Ksr
1kbf
Mus musculus
Eukaryo. plasma
1
0
1.8 ± 1.0
63 ± 11
-5.4
2.2.27.01.
RAS guanyl-releasing protein 1
4l9m
Homo sapiens
Eukaryo. plasma
1
0
5.3 ± 1.3
24 ± 3
-7.8
2.2.27.01.
RAF-1 proto-oncogene serine/threonine-protein kinase
1faq
Homo sapiens
Eukaryo. plasma
1
0
4.8 ± 1.1
30 ± 14
-7.3
2.2.27.01.
Rac GTPase-activating protein 1
4b6d
Homo sapiens
Eukaryo. plasma
1
0
3.5 ± 0.9
55 ± 4
-5.9
2.2.27.01.
C1 domain of protein kinase C gamma
1tbn
Rattus rattus
Eukaryo. plasma
1
0
4.8 ± 1.6
42 ± 19
-3.7
2.2.27.01.
C1 domain of protein kinase C gamma
2e73
Homo sapiens
Eukaryo. plasma
1
0
3.5 ± 1.3
53 ± 9
-4.7
2.2.27.01.
Diacylglycerol kinase delta
1r79
Homo sapiens
Eukaryo. plasma
1
0
3.3 ± 1.6
34 ± 19
-4.9
2.2.27.01.
C1 domain of protein kinase C delta
2yuu
Homo sapiens
Nuclear outer
1
0
4.0 ± 0.9
77 ± 20
-6.5
2.2.27.01.
Beta-chimaerin
1xa6
Homo sapiens
Eukaryo. plasma
1
0
2.1 ± 1.7
65 ± 7
-5.1
2.2.27.01.
C1 domain of unc-13 homolog A
1y8f
Rattus norvegicus
Eukaryo. plasma
1
0
2.5 ± 1.9
16 ± 17
-2.9
2.2.27.01.
C1 domanin of SH3 and cysteine-rich domain-containing protein 3
2db6
Homo sapiens
Eukaryo. plasma
1
0
2.7 ± 0.1
75 ± 0
-4.8
Copyright © 2005-2013
Andrei Lomize
,
Mikhail Lomize
and
Irina Pogozheva
University of Michigan, Ann Arbor, MI 48109 USA