PDB ID or protein name

Bacterial gram-positive plasma membrane (114 proteins)

Family Protein Name PDB ID Species Num. Subunits Num. TM Sec. Structs. Hydrophobic Thickness or Depth (Å) Tilt Angle (°) ΔGtransfer (kcal/mol)
1.1.01.01. Proteorhodopsin 4hyj Exiguobacterium sibiricum 1 7 30.0 ± 1.6 15 ± 7 -56.8
1.1.07.01. Nitric oxide reductase 3ayf Bacillus stearothermophilus 1 14 31.6 ± 0.8 8 ± 0 -109.3
1.1.08.01. V-type Sodium ATPase 2bl2 Enterococcus hirae 10 40 35.6 ± 0.7 0 ± 0 -189.6
1.1.08.01. F1F0 ATP synthase, F0 complex 4bem Acetobacterium woodii 10 22 34.8 ± 1.1 0 ± 0 -102.9
1.1.08.01. F1F0 ATP synthase subunit c 1wu0 Bacillus ps3 1 2 31.9 ± 2.7 44 ± 1 -23.2
1.1.08.01. F1F0 ATP synthase, F0 complex, conformation 2 3zo6 Bacillus pseudofirmus 12 24 39.6 ± 1.1 1 ± 0 -130.6
1.1.08.01. F1F0 ATP synthase, F0 complex, conformation 1 2x2v Bacillus pseudofirmus 13 26 35.3 ± 1.2 0 ± 0 -137.7
1.1.10.03. Multidrug ABC transporter SAV1866, closed state 2hyd Staphylococcus aureus 2 12 31.8 ± 1.7 3 ± 3 -110.5
1.1.12.01. NaK potassium channel, different strain of Bacillus cereus 3ouf Bacillus cereus 4 8 27.9 ± 1.3 0 ± 0 -91.0
1.1.12.01. Potassium channel KcsA, 20 A opening conformer 3fb8 Streptomyces lividans 4 8 29.8 ± 0.4 0 ± 0 -68.2
1.1.12.01. Potassium channel KcsA, structure 2 4uuj Streptomyces lividans 4 8 29.8 ± 0.5 0 ± 0 -90.2
1.1.12.01. Potassium channel KcsA, 17A opening conformer 3f7y Streptomyces lividans 4 8 31.3 ± 1.3 0 ± 0 -82.3
1.1.12.01. Potassium channel KcsA, 16 A opening conformer 3fb6 Streptomyces lividans 4 8 30.2 ± 1.0 0 ± 0 -86.1
1.1.12.01. Potassium channel KcsA, full-length, closed 3eff Streptomyces lividans 4 8 31.8 ± 1.3 0 ± 0 -107.3
1.1.12.01. Potassium channel KscA, complex with charibdotoxin 2a9h Streptomyces lividans 4 8 31.8 ± 1.4 0 ± 1 -105.1
1.1.12.01. NaK potassium channel, closed state 2ahy Bacillus cereus 4 8 29.5 ± 0.7 0 ± 1 -105.7
1.1.12.01. NaK potassium channel, open state 3e86 Bacillus cereus 4 8 27.6 ± 0.9 0 ± 0 -90.0
1.1.12.01. Potassium channel KcsA 1s5h Streptomyces coelicolor 4 8 33.7 ± 1.3 0 ± 1 -111.9
1.1.12.01. Potassium channel KcsA, open inactivated state 3f5w Streptomyces lividans 4 8 29.2 ± 0.7 0 ± 0 -83.5
1.1.12.01. Voltage-gated K+ channel 4h33 Listeria monocytogenes 4 8 33.2 ± 1.9 0 ± 0 -115.9
1.1.12.01. Potassium channel KcsA 1r3j Streptomyces lividans 4 8 34.8 ± 1.2 0 ± 0 -111.0
1.1.12.01. Potassium channel KcsA, 14.5 A opening conformer 3fb5 Streptomyces lividans 4 8 33.7 ± 0.9 0 ± 0 -115.9
1.1.12.01. Potassium channel KcsA, full length, open 3pjs Streptomyces lividans 4 8 31.6 ± 1.2 1 ± 1 -87.3
1.1.12.01. Voltage-gated sodium channel 4bgn Caldalkalibacillus thermarum 4 24 27.0 ± 0.3 0 ± 0 -201.5
1.1.12.01. Potassium channel KcsA, complex with Rb+ 3fb7 Streptomyces lividans 4 8 28.6 ± 1.2 0 ± 0 -79.0
1.1.12.01. Potassium channel KcsA, 23A opening conformer 3f7v Streptomyces lividans 4 8 30.1 ± 1.1 0 ± 0 -95.2
1.1.12.03. TrkH/TrkA potassium transport complex 4j7c Bacillus subtilis 2 16 31.8 ± 1.0 0 ± 0 -165.6
1.1.14.02. Formate/nitrite transporter 3tdp Clostridium difficile 5 30 28.4 ± 1.9 0 ± 0 -161.3
1.1.18.01. Mechanosensitive channel MscL 3hzq Staphylococcus aureus 4 8 20.8 ± 1.2 1 ± 0 -56.9
1.1.18.01. Mechanosensitive channel MscL 2oar Mycobacterium tuberculosis 5 10 36.1 ± 2.2 0 ± 0 -142.7
1.1.19.01. Mechanosensitive channel protein MscS 3t9n Thermoanaerobacter tengcongensis 7 7 28.0 ± 0.7 0 ± 0 -131.5
1.1.19.01. Mechanosensitive channel protein MscS, slightly different conf. 3udc Thermoanaerobacter tengcongensis 7 7 32.2 ± 0.7 0 ± 0 -121.8
1.1.25.05. Proton-dependent oligopeptide transporter, conformation 1 4ikv Geobacillus kaustophilus 1 14 30.8 ± 1.5 5 ± 0 -110.9
1.1.25.05. Di-or tripeptide:H+ symporter, inward open, peptide-bound 4d2d Streptococcus thermophilus 1 14 31.0 ± 1.1 7 ± 0 -109.9
1.1.25.05. Proton-dependent oligopeptide transporter, conformation 3 4ikx Geobacillus kaustophilus 1 14 31.0 ± 1.0 10 ± 0 -115.9
1.1.25.05. Di-or tripeptide:H+ symporter, inward open conformation 4aps Streptococcus thermophilus 1 14 31.8 ± 0.7 13 ± 0 -114.6
1.1.25.05. Proton-dependent oligopeptide transporter, conformation 2 4iky Geobacillus kaustophilus 1 14 31.8 ± 1.3 4 ± 0 -115.6
1.1.25.06. Bicyclomycin resistance protein TcaB 4lds Staphylococcus epidermidis 1 12 31.8 ± 1.6 4 ± 0 -87.1
1.1.26.01. MhsT transporter, inward-facing state 4us3 Bacillus halodurans 1 11 29.8 ± 0.8 11 ± 1 -87.1
1.1.26.02. Sodium-hydantoin transporter Mhp1, outward-facing conformation 2 2jln Mycobacterium liquefaciens 1 12 29.8 ± 1.5 16 ± 0 -98.9
1.1.26.02. Sodium-hydantoin transporter Mhp1, inward-facing conformation 2x79 Mycobacterium liquefaciens 1 12 30.7 ± 1.1 13 ± 0 -85.0
1.1.26.02. Sodium-hydantoin transporter Mhp1, outward-facing conformation 1 4d1b Mycobacterium liquefaciens 1 12 29.8 ± 0.9 17 ± 0 -96.4
1.1.26.04. Glycine betaine transporter BetP, substrate-bound 2wit Corynebacterium glutamicum 3 36 30.4 ± 1.2 0 ± 0 -198.6
1.1.26.04. Glycine betaine transporter BetP, inward-facing conformation 4c7r Corynebacterium glutamicum 3 39 30.0 ± 0.7 1 ± 0 -186.7
1.1.26.04. Glycine betaine transporter BetP, asymmetric trimer, conformation 1 4ain Corynebacterium glutamicum 3 36 29.8 ± 0.6 0 ± 0 -198.8
1.1.26.04. Glycine betaine transporter BetP, asymmetric trimer, conformation 2 4doj Corynebacterium glutamicum 3 36 30.0 ± 0.6 0 ± 0 -186.4
1.1.26.04. Glycine betaine transporter BetP, outward-open 4llh Corynebacterium glutamicum 3 36 29.8 ± 0.4 0 ± 0 -175.4
1.1.26.04. Glycine betaine transporter BetP, alternative inward-facing open conformation 3p03 Corynebacterium glutamicum 3 36 29.8 ± 0.7 1 ± 0 -160.9
1.1.30.01. Membrane protein insertase YidC 2 3wo7 Bacillus halodurans 1 5 29.0 ± 1.3 12 ± 0 -58.2
1.1.37.01. Divalent metal cation transporter MntH 4wgv Staphylococcus capitis 1 11 29.8 ± 1.6 10 ± 0 -68.0
1.1.38.01. MATE multidrug transporter DinF-BH 4lz6 Bacillus halodurans 1 12 31.0 ± 1.1 5 ± 1 -96.5
1.1.39.01. Riboflavin transporter RibU 3p5n Staphylococcus aureus 1 6 30.6 ± 1.4 6 ± 4 -53.5
1.1.39.02. Biotin transporter BioY 4dve Lactococcus lactis 1 6 31.8 ± 1.2 13 ± 1 -71.7
1.1.39.02. Thiamine transporter protein, ThiT 3rlb Lactococcus lactis 1 6 30.8 ± 1.8 9 ± 1 -60.4
1.1.39.02. Thiamine transporter, ThiA 4tkr Listeria monocytogenes 1 6 31.4 ± 1.5 4 ± 1 -58.1
1.1.39.03. Energy-coupling factor transporter EcfA, conformation 2 4huq Lactobacillus brevis 2 7 29.8 ± 0.7 14 ± 0 -76.0
1.1.39.03. Energy-coupling factor transporter EcfA, conformation 1 4hzu Lactobacillus brevis 2 7 29.7 ± 1.6 13 ± 1 -64.8
1.1.39.04. Nickel/cobalt transporter CbiM 4m58 Thermoanaerobacter tengcongensis 1 7 29.8 ± 0.9 18 ± 2 -59.8
1.1.43.01. Saccharide transporter component, EIIC (ChbC) 3qnq Bacillus cereus 2 20 29.6 ± 1.0 1 ± 0 -140.6
1.1.56.01. Glycerol phosphate lipoteichoic acid synthase 2w5q Staphylococcus aureus 1 0 0.4 ± 3.6 82 ± 11 -2.5
1.1.56.01. Glycerol phosphate lipoteichoic acid synthase 2 2w8d Bacillus subtilis 1 0 0.0 ± 6.0 83 ± 58 -1.6
1.1.59.01. ATP-dependent Clp protease proteolytic subunit 1 2cby Mycobacterium tuberculosis 7 0 3.2 ± 0.0 89 ± 0 -17.0
1.1.64.01. Ca2+/H+ antiporter YfkE 4kjr Bacillus subtilis 3 33 29.8 ± 0.4 0 ± 0 -181.6
1.1.64.01. Ca2+/H+ antiporter YfkE, different conformation 4kjs Bacillus subtilis 3 33 31.2 ± 0.8 0 ± 0 -201.6
1.1.75.02. Sec-independent protein translocase TatA 2l16 Bacillus subtilis 1 1 27.6 ± 2.9 10 ± 1 -27.9
1.1.86.01. Protein YetJ, open conformation 4pgs Bacillus subtilis 1 7 30.8 ± 1.6 7 ± 3 -67.7
1.1.86.01. Protein YetJ, closed conformation 4pgr Bacillus subtilis 1 7 29.8 ± 2.0 15 ± 2 -72.0
1.2.05.02. Internalin C 1xeu Listeria monocytogenes 1 0 2.9 ± 1.3 81 ± 0 -4.1
1.2.06.01. Spore surface protein Bcla 1wck Bacillus anthracis 3 0 3.3 ± 0.2 8 ± 5 -8.9
1.2.18.01. Putative sortase 2wts Streptococcus pneumoniae 1 0 5.1 ± 1.0 20 ± 3 -4.6
1.2.18.01. Sortase B 1rz2 Bacillus anthracis 1 0 3.0 ± 0.6 82 ± 6 -5.8
1.2.20.01. Mycobacterial protein Rv1761c 2k3m Mycobacterium tuberculosis 1 1 23.8 ± 2.1 11 ± 3 -10.2
1.2.27.01. Fst toxin 2kv5 Enterococcus faecalis 1 1 26.0 ± 2.9 35 ± 8 -18.9
1.2.29.01. Septation ring formation regulator EzrA 4uy3 Staphylococcus aureus 1 0 1.2 ± 2.8 44 ± 4 -3.0
1.2.32.01. Fatty-acid peroxygenase 1izo Bacillus subtilis 1 0 1.2 ± 0.3 76 ± 1 -5.5
1.2.33.02. Alpha-glycerophosphate oxidase (GlpO) 2rgh Streptomyces sp. 1 0 3.9 ± 1.4 71 ± 12 -6.2
1.2.38.01. Glycosyltransferase MtgA 3hzs Staphylococcus aureus 1 0 7.0 ± 1.1 54 ± 9 -14.6
1.2.38.01. Monofunctional glycosyltransferase 3vmr Staphylococcus aureus 1 1 30.8 ± 1.2 25 ± 2 -35.4
1.2.38.01. Penicillin-binding protein 2 2olv Staphylococcus aureus 1 0 3.7 ± 2.0 58 ± 8 -7.3
2.1.05.01. Squalene-hopene cyclase 2sqc Alicyclobacillus acidocaldarius 2 0 7.4 ± 0.5 90 ± 1 -27.8
2.1.30.01. Membrane-integrating protein mistic, mstX 1ygm Bacillus subtilis 1 0 2.6 ± 1.8 31 ± 6 -5.2
2.1.34.01. Septium site-determining protein DivIVA 2wuj Bacillus subtilis 2 0 4.0 ± 1.8 2 ± 18 -5.4
2.1.47.01. Group 1 truncated hemoglobin glbN 2gkn Mycobacterium tuberculosis 2 0 4.5 ± 0.4 86 ± 1 -11.9
2.1.47.01. Group 2 truncated hemoglobin glbO 2qrw Mycobacterium tuberculosis 1 0 4.5 ± 1.0 52 ± 3 -5.5
2.2.16.01. Lipoprotein lppX 2byo Mycobacterium tuberculosis 1 0 1.9 ± 1.7 80 ± 13 -4.8
2.2.16.01. Lipoprotein LprG 3mh9 Mycobacterium tuberculosis 1 0 2.5 ± 2.7 47 ± 10 -3.0
2.2.47.01. Glycoside hydrolase family 9 protein 1wzx Clostridium thermocellum 1 0 7.4 ± 2.0 77 ± 6 -4.1
2.3.01.08. Endoglucanase H 2vi0 Clostridium thermocellum 1 0 1.5 ± 1.3 36 ± 9 -3.8
2.3.04.01. Tyrosine-protein phosphatase CpsB 2wje Streptococcus pneumoniae 1 0 4.2 ± 2.8 76 ± 26 -4.6
2.3.05.02. FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4nwz Caldalkalibacillus thermarum 2 0 6.2 ± 1.0 90 ± 2 -13.7
2.3.06.05. Copper inducible hydrolase YahD 3og9 Lactococcus lactis 1 0 1.4 ± 1.1 33 ± 10 -4.0
2.3.06.05. Carboxylesterase 2h1i Bacillus cereus 1 0 2.3 ± 1.8 32 ± 31 -3.6
2.3.06.09. Lysin B from mycobacteriophage 3hc7 Mycobacterium phage D29 1 0 6.6 ± 2.0 50 ± 12 -7.0
2.3.06.12. Esterase LipW 3qh4 Mycobacterium marinum 1 0 2.4 ± 1.2 76 ± 32 -5.0
2.3.06.12. Carboxylesterase 2hm7 Alicyclobacillus acidocaldarius 1 0 5.8 ± 1.7 70 ± 5 -7.7
2.3.06.12. Heroin esterase 1lzk Rhodococcus sp. 1 0 1.5 ± 1.5 69 ± 9 -4.0
2.3.10.04. Teichoic acid biosynthesis protein TagF 3l7l Staphylococcus epidermidis 1 0 6.9 ± 2.0 35 ± 15 -10.8
2.3.10.06. Alpha-(1-2)-phosphatidylinositol mannosyltransferase, structure 3 4n9w Mycobacterium smegmatis 1 0 5.6 ± 1.2 84 ± 3 -4.6
2.3.10.06. Alpha-(1-2)-phosphatidylinositol mannosyltransferase, structure 2 4nc9 Mycobacterium smegmatis 1 0 4.1 ± 1.1 69 ± 7 -7.9
2.3.10.06. Alpha-(1-2)-phosphatidylinositol mannosyltransferase, structure 1 2gek Mycobacterium smegmatis 1 0 3.4 ± 2.6 85 ± 5 -5.7
2.3.16.02. Translocation ATPase SecA 1tf5 Bacillus subtilis 1 0 2.5 ± 1.1 64 ± 5 -7.0
2.3.17.02. Dihydropteroate synthase 1tx2 Bacillus anthracis 2 0 2.5 ± 0.3 90 ± 2 -7.7
2.3.19.03. Galactofuranosyl transferase GlfT2 4fix Mycobacterium tuberculosis 4 0 3.6 ± 0.0 90 ± 0 -24.8
2.3.23.01. Beta-Ketoacyl synthase/Acyl transferase 1tqy Streptomyces coelicolor 2 0 1.4 ± 0.2 83 ± 1 -4.9
2.3.26.01. Phosphate acyltransferase 1u7n Enterococcus faecalis 2 0 6.1 ± 1.5 78 ± 13 -6.1
2.4.01.01. Cholesterol oxidase 1coy Brevibacterium sterolicum 1 0 4.4 ± 1.1 43 ± 10 -6.8
2.4.01.01. Cholesterol oxidase 1b4v Streptomyces sp. 1 0 5.4 ± 0.6 39 ± 4 -8.4
2.4.02.01. Epoxide Hydrolase 2bng Mycobacterium bovis 2 0 8.2 ± 0.6 88 ± 4 -24.0
2.4.20.02. Arylamine N-acetyltransferase 1w5r Mycobacterium smegmatis 1 0 2.6 ± 0.5 82 ± 6 -6.2
2.4.22.01. Decaprenylphosphoryl-beta-D-ribose oxidase, another loop disordered 4ff6 Mycobacterium tuberculosis 1 0 3.4 ± 1.5 19 ± 6 -6.4
2.4.22.01. Decaprenylphosphoryl-beta-D-ribose oxidase 4fdo Mycobacterium tuberculosis 1 0 4.3 ± 1.1 67 ± 4 -5.3
3.1.03.05. Anchor helix of 1,2-diacylglycerol 3-glucosyltransferase 1z2t Acholeplasma laidlawii 1 0 9.6 ± 1.6 90 ± 4 -13.7
3.1.32.01. Toxic peptide of toxin-antitoxin system (PEPA1) 4b19 Staphylococcus aureus 1 1 18.8 ± 4.5 62 ± 2 -23.8
3.4.02.03. Lantibiotic 107891 2mh5 Microbispora sp. 1 0 7.3 ± 3.0 72 ± 38 -4.0