PDB ID or protein name

Viral membrane (40 proteins)

Family Protein Name PDB ID Species Num. Subunits Num. TM Sec. Structs. Hydrophobic Thickness or Depth (Å) Tilt Angle (°) ΔGtransfer (kcal/mol)
2.1.21.04. Matrix protein p19 1a6s Rous sarcoma virus 1 0 3.1 ± 2.7 89 ± 14 -3.6
2.1.21.01. Influenza virus matrix protein M1 1aa7 Influenza virus 2 0 2.6 ± 0.8 89 ± 4 -5.6
3.1.07.02. Envelope glycoprotein gp41 1df4 Human immunodeficiency virus type 1 3 0 6.3 ± 0.9 0 ± 10 -6.7
3.1.07.04. Envelope glycoprotein E1, heterodimerization peptide (350-370) 1emz Hepatitis C virus 1 0 6.2 ± 0.2 86 ± 9 -8.5
3.1.07.03. Hemagglutinin, fusion peptide 346-365, conformation 1 1ibn Influenza virus 1 0 9.1 ± 1.2 67 ± 7 -8.0
2.4.50.01. Matrix protein 1lg7 Vesicular stomatitis virus 1 0 2.7 ± 0.4 82 ± 2 -7.3
2.2.19.01. Adsorption protein p2 1n7v Bacteriophage prd1 1 0 8.7 ± 0.4 81 ± 1 -8.6
1.2.43.01. Major envelope glycoprotein E, ectodomain 1ok8 Dengue virus 3 0 5.2 ± 0.9 0 ± 6 -9.5
1.2.43.02. Fusion glycoprotein E1 1rer Semiliki forest virus 3 0 2.6 ± 2.0 38 ± 5 -6.5
3.1.07.02. Paramyxovirus sv5 fusion protein core 1svf Simian virus 5 6 0 8.4 ± 0.9 0 ± 11 -10.7
1.2.43.01. Envelope glycoprotein 1urz Tick-borne encephalitis virus 3 0 5.9 ± 0.9 1 ± 8 -10.3
3.1.07.03. Hemagglutinin, fusion peptide 346-365, different strain 1xop Influenza virus 1 0 6.3 ± 0.5 70 ± 13 -11.0
1.2.43.04. Glycoprotein G 2cmz Vesicular stomatitis virus 3 0 6.6 ± 0.0 3 ± 0 -10.5
1.2.11.02. Capsid protein G8P 2cps Bacteriophage M13 1 1 30.8 ± 3.1 15 ± 3 -19.9
2.1.21.02. Matrix protein p10 2f76 Mason-Pfizer monkey virus 1 0 3.9 ± 1.2 48 ± 5 -5.8
1.2.43.06. Spike glycoprotein 2ghv Human SARS coronavirus 1 0 3.8 ± 1.9 45 ± 9 -6.8
3.1.07.03. Hemagglutinin, peptide 330-349 2jrd Influenza virus 1 0 8.1 ± 4.0 71 ± 5 -6.8
1.2.23.01. M2 proton channel of Influenza B 2kix Influenza virus 4 4 31.8 ± 1.2 2 ± 3 -64.4
1.2.23.01. M2 proton channel of Influenza A, complex with amantadine 2kqt Influenza virus 4 4 30.2 ± 1.3 0 ± 4 -59.6
1.2.23.01. M2 proton channel of Influenza A, closed state, V27A mutant 2kwx Influenza virus 4 4 33.4 ± 1.9 2 ± 3 -63.4
3.1.07.03. Hemagglutinin, fusion peptide 346-365, conformation 3 2kxa Influenza virus 1 0 10.3 ± 1.9 84 ± 13 -14.5
3.1.07.03. Hemagglutinin, fusion peptide 346-365, conformation 2 2l4g Influenza virus 1 0 11.1 ± 0.4 73 ± 4 -10.4
3.1.01.03. Viral core-E1 signal peptide 2lif Hepatitis C virus 1 1 29.6 ± 5.0 19 ± 10 -16.6
1.2.23.01. M2 proton channel, influenza A and B hydrid 2ljb Influenza virus 4 4 31.6 ± 1.6 1 ± 1 -51.3
1.2.23.01. M2 proton channel, influenza A and B hydrid, complex with rimantadine 2ljc Influenza virus 4 4 30.6 ± 1.8 9 ± 2 -44.9
3.1.07.02. gp41-M-MAT, a membrane associated MPER trimer 2lp7 Human immunodeficiency virus type 1 3 3 26.8 ± 0.9 1 ± 1 -14.2
2.1.21.02. Matrix protein p10, myristoylated 2lpy Mason-Pfizer monkey virus 1 0 3.2 ± 0.5 8 ± 6 -3.4
1.2.23.01. M2 proton channel of Influenza A, closed state, S31N, with drug 2ly0 Influenza virus 4 4 34.0 ± 1.6 0 ± 0 -67.5
1.2.23.01. M2 proton channel of Influenza A, closed state, NMR 2rlf Influenza virus 4 4 34.3 ± 2.0 3 ± 1 -67.6
2.4.50.01. Matrix protein, different conformation 2w2r Vesicular stomatitis virus 1 0 4.1 ± 0.1 57 ± 1 -10.4
3.1.07.02. Envelope glycoprotein gp41 2x7r Human immunodeficiency virus type 1 3 0 5.5 ± 1.1 0 ± 10 -10.9
1.2.43.01. E1/E2 envelope glycoprotein complex 2yew Barmah forest virus 8 8 30.0 ± 0.8 0 ± 0 -53.5
1.2.23.01. M2 proton channel of Influenza A, open state, ligand-free 3bkd Influenza virus 4 4 27.1 ± 1.8 3 ± 1 -55.0
1.2.23.01. M2 proton channel of Influenza A, open state, complex with amantadine 3c9j Influenza virus 4 4 29.4 ± 1.4 2 ± 3 -65.6
1.2.43.05. Major envelope glycoprotein 3duz Autographa californica nuclear polyhedrosis virus 3 0 3.2 ± 0.4 4 ± 6 -9.3
1.2.43.01. Envelope protein 3g7t Dengue virus 3 0 5.9 ± 0.9 1 ± 3 -12.2
1.2.43.01. Capsid envelop protein complex 3j2p Dengue virus 4 8 22.8 ± 0.4 0 ± 0 -62.7
1.2.43.01. E1/E2 envelope glycoprotein complex 3j2w Chikungunya virus 8 8 30.8 ± 0.9 2 ± 0 -134.1
1.2.23.01. M2 proton channel of Influenza A, closed state 3lbw Influenza virus 4 4 31.1 ± 1.7 7 ± 10 -50.5
1.2.43.03. Envelope glycoprotein B 3nw8 Human herpesvirus 3 0 4.6 ± 0.0 1 ± 1 -11.7