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• Protein Classification

• Types (3 types)
• Classes (11 classes)
• Superfamilies (392 superfamilies)
• Families (667 families)
• Species (538 species)
• Localization (24 types)
• All proteins in OPM (2172 proteins)

• Protein Links

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1ifi » Capsid protein G8P

• Type: 1. Transmembrane (3 classes)
• Class: 1.2. Alpha-helical bitopic (42 superfamilies)
• Superfamily: 1.2.11. Inovirus (filamentous phage) major coat protein (2 families)
• Family: 1.2.11.01. Major coat protein, symmetry class I (3 proteins)
• Species: Bacteriophage fd (1 protein)
• Localization: Secreted (681 proteins)

1ifi » Capsid protein G8P
Hydrophobic Thickness	36.8 ± 0.2 Å
Tilt Angle	0 ± 0°
ΔGtransfer	-69.8 kcal/mol
Links to 1ifi	PDB Sum, PDB, SCOP, MSD, OCA, MMDB
Topology	subunit A (N-terminus out)
Resolution	3.3 Å
Other PDB entries of this protein	1fdm, 1ifd, 1ifj, 1mzt, 1nh4, 2c0w, 2c0x, 2hi5
Number of TM Secondary Structures	15

15 transmembrane subunits
A - Tilt: 20° - Segments: 1(18-44)
B - Tilt: 20° - Segments: 1(18-44)
C - Tilt: 20° - Segments: 1(18-44)
D - Tilt: 20° - Segments: 1(18-44)
E - Tilt: 20° - Segments: 1(18-44)
F - Tilt: 19° - Segments: 1(30-49)
G - Tilt: 19° - Segments: 1(30-49)
H - Tilt: 19° - Segments: 1(30-49)
I - Tilt: 19° - Segments: 1(30-49)
J - Tilt: 19° - Segments: 1(30-49)
K - Tilt: 18° - Segments: 1(41-49)
L - Tilt: 18° - Segments: 1(41-49)
M - Tilt: 18° - Segments: 1(41-49)
N - Tilt: 18° - Segments: 1(41-49)
O - Tilt: 18° - Segments: 1(41-49)

Copyright © 2005-2013 Andrei Lomize, Mikhail Lomize and Irina Pogozheva
University of Michigan, Ann Arbor, MI 48109 USA