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• Protein Classification

• Types (3 types)
• Classes (11 classes)
• Superfamilies (393 superfamilies)
• Families (668 families)
• Species (539 species)
• Localization (24 types)
• All proteins in OPM (2185 proteins)

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1ifp » Capsid protein G8P

• Type: 1. Transmembrane (3 classes)
• Class: 1.2. Alpha-helical bitopic (42 superfamilies)
• Superfamily: 1.2.11. Inovirus (filamentous phage) major coat protein (2 families)
• Family: 1.2.11.02. Major coat protein, symmetry class II (6 proteins)
• Species: Bacteriophage Pf3 (1 protein)
• Localization: Secreted (681 proteins)

1ifp » Capsid protein G8P
Hydrophobic Thickness	34.2 ± 0.1 Å
Tilt Angle	6 ± 6°
ΔGtransfer	-57.6 kcal/mol
Links to 1ifp	PDB Sum, PDB, SCOP, MSD, OCA, MMDB
Topology	subunit A (N-terminus out)
Resolution	3.1 Å
Other PDB entries representing this structure	none
Number of TM Secondary Structures	12

15 transmembrane subunits
A - Tilt: 17° - Segments: 1(13-37)
B - Tilt: 15° - Segments: 1(16-40)
C - Tilt: 24° - Segments: 1(16-41)
D - Tilt: 31° - Segments: 1(16-41)
E - Tilt: 30° - Segments: 1(16-42)
F - Tilt: 22° - Segments: 1(20-43)
G - Tilt: 14° - Segments: 1(26-43)
H - Tilt: 17° - Segments: 1(28-43)
I - Tilt: 27° - Segments: 1(27-43)
J - Tilt: 31° - Segments: 1(27-43)
K - Tilt: 27° - Segments: 1(30-43)
L - Tilt: 22° - Segments: 1(35-43)
M - Tilt: 16° - Segments: 1(38-43)
N - Tilt: 11° - Segments: 1(39-43)
O - Tilt: 21° - Segments: 1(39-43)

Copyright © 2005-2013 Andrei Lomize, Mikhail Lomize and Irina Pogozheva
University of Michigan, Ann Arbor, MI 48109 USA