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• Protein Classification

• Types (3 types)
• Classes (11 classes)
• Superfamilies (393 superfamilies)
• Families (668 families)
• Species (539 species)
• Localization (24 types)
• All proteins in OPM (2185 proteins)

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1ijd » Light-harvesting complex LH3

• Type: 1. Transmembrane (3 classes)
• Class: 1.1. Alpha-helical polytopic (72 superfamilies)
• Superfamily: 1.1.03. Light-harvesting complexes (2 families) 5.B.4 (TCDB)
• Family: 1.1.03.01. Light-harvesting complexes from bacteria (6 proteins)
• Species: Rhodopseudomonas acidophila (2 proteins)
• Localization: Bacterial Gram-negative inner membrane (274 proteins)

1ijd » Light-harvesting complex LH3
Hydrophobic Thickness	29.8 ± 0.7 Å
Tilt Angle	0 ± 0°
ΔGtransfer	-174.6 kcal/mol
Links to 1ijd	PDB Sum, PDB, SCOP, MSD, OCA, MMDB
Topology	subunit A (N-terminus in)
Resolution	3.00 Å
Other PDB entries representing this structure	none
Number of TM Secondary Structures	18

18 transmembrane subunits
A - Tilt: 3° - Segments: 1(18-37)
B - Tilt: 9° - Segments: 1(19-37)
C - Tilt: 3° - Segments: 1(18-37)
D - Tilt: 9° - Segments: 1(19-37)
E - Tilt: 3° - Segments: 1(18-37)
F - Tilt: 9° - Segments: 1(19-37)
G - Tilt: 3° - Segments: 1(18-37)
H - Tilt: 9° - Segments: 1(19-37)
I - Tilt: 3° - Segments: 1(18-37)
J - Tilt: 9° - Segments: 1(19-37)
K - Tilt: 3° - Segments: 1(18-37)
L - Tilt: 9° - Segments: 1(19-37)
M - Tilt: 3° - Segments: 1(18-37)
N - Tilt: 9° - Segments: 1(19-37)
O - Tilt: 3° - Segments: 1(18-37)
P - Tilt: 3° - Segments: 1(18-37)
Q - Tilt: 9° - Segments: 1(19-37)
R - Tilt: 9° - Segments: 1(19-37)

Copyright © 2005-2013 Andrei Lomize, Mikhail Lomize and Irina Pogozheva
University of Michigan, Ann Arbor, MI 48109 USA