PDB ID or protein name

1jdm » Sarcolipin

1jdm » Sarcolipin
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Topology in Endoplasmic reticulum membrane
Topologylumenal side
cytoplasmic side
1jdm » Sarcolipin
Hydrophobic Thickness 29.6 ± 2.4 Å
Tilt Angle 3 ± 7°
ΔGtransfer -28.5 kcal/mol
Links to 1jdm PDB Sum, PDB, SCOP, MSD, OCA, MMDB
Topology subunit A (N-terminus cytoplasmic)
Resolution NMR
Other PDB entries representing this structure none
Number of TM Secondary Structures 1
1 transmembrane subunit
A - Tilt: 3° - Segments: 1(7-27)
Experimental Verification for 1jdm » Sarcolipin
Consistent with the solid-state NMR determined orientation (Mascioni et al. 2002).
1 reference
Mascioni A, Karim C, Barany G, Thomas DD, Veglia G. Structure and orientation of sarcolipin in lipid environments. Biochemistry. 2002 Jan 15;41(2):475-82. PubMed
Comments on 1jdm » Sarcolipin
This is structure in SDS micelles. Sarcolipin and phospholamban are weakly homologous. The original model of sarcolipin (1jdm) has been optimized. This is full-length peptide.