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• Protein Classification

• Types (3 types)
• Classes (11 classes)
• Superfamilies (392 superfamilies)
• Families (667 families)
• Species (538 species)
• Localization (24 types)
• All proteins in OPM (2172 proteins)

• Protein Links

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1kmp » Outer membrane transporter FecA, different conformation

• Type: 1. Transmembrane (3 classes)
• Class: 1.3. Beta-barrel transmembrane (26 superfamilies)
• Superfamily: 1.3.20. Ligand-gated protein channels (n=22,S=24) (1 family) 1.B.14 (TCDB)
• Family: 1.3.20.01. Outer Membrane Receptor (OMR) (24 proteins) 1.B.14 (TCDB)
• Species: Escherichia coli (178 proteins)
• Localization: Bacterial Gram-negative outer membrane (136 proteins)

1kmp » Outer membrane transporter FecA, different conformation
Hydrophobic Thickness	24.9 ± 0.9 Å
Tilt Angle	4 ± 0°
ΔGtransfer	-74.0 kcal/mol
Links to 1kmp	PDB Sum, PDB, SCOP, MSD, OCA, MMDB
Topology	subunit A (N-terminus out)
Resolution	2.5 Å
Other PDB entries of this protein	1po3
Number of TM Secondary Structures	22

1 transmembrane subunit
A - Tilt: 2° - Segments: 1(223-232), 2(244-252), 3(258-267), 4(281-289), 5(296-304), 6(337-346), 7(353-361), 8(385-393), 9(402-411), 10(447-455), 11(460-469), 12(491-499), 13(505-514), 14(538-547), 15(551-560), 16(585-593), 17(604-612), 18(635-644), 19(647-655), 20(682-692), 21(699-707), 22(732-740)

Copyright © 2005-2013 Andrei Lomize, Mikhail Lomize and Irina Pogozheva
University of Michigan, Ann Arbor, MI 48109 USA