• HOME
• ABOUT OPM
• DOWNLOAD OPM FILES
• CONTACT US
• PPM SERVER
• LIPID COMPOSITION ATLAS

• Protein Classification

• Types (3 types)
• Classes (11 classes)
• Superfamilies (401 superfamilies)
• Families (685 families)
• Species (556 species)
• Localization (24 types)
• All proteins in OPM (2304 proteins)

• Protein Links

• PDB Sum,
• PDB,
• OCA,
• MPKS,
• PDBTM,
• MPDB,
• CGDB

1pp9 » Cytochrome bc1, mitochondrial, different structure of complex 2

• Type: 1. Transmembrane (3 classes)
• Class: 1.1. Alpha-helical polytopic (75 superfamilies)
• Superfamily: 1.1.06. Electron transport chain complex III (bc1 and b6f complexes) (1 family) 3.D.3 (TCDB)
• Family: 1.1.06.01. Cytochrome bc1 and b6f complexes (14 proteins) 3.D.3 (TCDB)
• Species: Bos taurus (64 proteins)
• Localization: Mitochondrial inner membrane (51 proteins)

1pp9 » Cytochrome bc1, mitochondrial, different structure of complex 2
Hydrophobic Thickness	29.8 ± 0.3 Å
Tilt Angle	6 ± 0°
ΔGtransfer	-179.3 kcal/mol
Links to 1pp9	PDB Sum, PDB, SCOP, MSD, OCA, MMDB
Topology	subunit C (N-terminus matrix space)
Resolution	2.1 Å
Other PDB entries representing this structure	1ppj
Number of TM Secondary Structures	24

10 transmembrane subunits
C - Tilt: 16° - Segments: 1(29-50), 2(82-107), 3(110-130), 4(180-200), 5(224-245), 6(288-307), 7(319-339), 8(349-369)
D - Tilt: 4° - Segments: 1(204-224)
E - Tilt: 36° - Segments: 1(34-59)
G - Tilt: 41° - Segments: 1(33-61)
J - Tilt: 29° - Segments: 1(17-39)
P - Tilt: 9° - Segments: 1(29-50), 2(82-107), 3(110-130), 4(180-200), 5(224-245), 6(287-307), 7(319-339), 8(349-369)
Q - Tilt: 2° - Segments: 1(204-224)
R - Tilt: 38° - Segments: 1(34-59)
T - Tilt: 43° - Segments: 1(33-62)
W - Tilt: 30° - Segments: 1(17-39)

Copyright © 2005-2013 Andrei Lomize, Mikhail Lomize and Irina Pogozheva
University of Michigan, Ann Arbor, MI 48109 USA