1vgo » Archaerhodopsin-2
3D view in Chime, Jmol or Webmol
Download Coordinates
Topology in Archaebacterial membrane
Download Coordinates
Topology in Archaebacterial membrane
 | extracellular side |
| cytoplasmic side |
- Type: 1. Transmembrane (2 classes)
- Class: 1.1. Alpha-helical transmembrane (54 superfamilies)
- Superfamily: 1.1.01. Rhodopsin-like proteins (2 families)
- Family: 1.1.01.01. Ion-translocating microbial rhodopsin (10 proteins) 3.E.1 (TCDB)
- Species: Halobacterium sp. (3 proteins)
- Localization: Archaebacterial membrane (21 proteins)
| 1vgo » Archaerhodopsin-2 | |
|---|---|
| Hydrophobic Thickness | 30.8 ± 1.5 Å |
| Tilt Angle | 9 ± 4° |
| ΔGtransfer | -81.8 kcal/mol |
| Links to 1vgo | PDB Sum, SCOP, MSD, OCA, MMDB, Dali |
| Topology | subunit A (N-terminus extracellular) |
| Resolution | 2.5 Å |
| Related PDB Sum entries | 2ei4, 2z55 |
| Number of TM Secondary Structures | 7 |
| 1 transmembrane subunit |
|---|
| A - Tilt: 9° - Segments: 1(13-33), 2(47-66), 3(85-103), 4(111-132), 5(138-159), 6(179-196), 7(206-229) |
| Comments on 1vgo » Archaerhodopsin-2 |
|---|
| Light-driven proton pump. It may interact with bacterioruberin in the claret membrane. |
