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1vgo » Archaerhodopsin-2

• Type: 1. Transmembrane (3 classes)
• Class: 1.1. Alpha-helical polytopic (72 superfamilies)
• Superfamily: 1.1.01. Rhodopsin-like receptors and pumps (4 families) 3.E.1 (TCDB)
• Family: 1.1.01.01. Microbial and algal rhodopsins (17 proteins) 3.E.1 (TCDB)
• Species: Halobacterium sp. (3 proteins)
• Localization: Archaebacterial membrane (54 proteins)

1vgo » Archaerhodopsin-2
Hydrophobic Thickness	30.7 ± 1.3 Å
Tilt Angle	18 ± 2°
ΔGtransfer	-73.1 kcal/mol
Links to 1vgo	PDB Sum, PDB, SCOP, MSD, OCA, MMDB
Topology	subunit A (N-terminus extracellular)
Resolution	2.5 Å
Other PDB entries of this protein	2ei4, 2z55
Number of TM Secondary Structures	7

1 transmembrane subunit
A - Tilt: 17° - Segments: 1(13-36), 2(47-66), 3(85-103), 4(111-132), 5(136-157), 6(179-196), 7(206-227)

Comments on 1vgo » Archaerhodopsin-2
Light-driven proton pump. It may interact with bacterioruberin in the claret membrane.

Copyright © 2005-2013 Andrei Lomize, Mikhail Lomize and Irina Pogozheva
University of Michigan, Ann Arbor, MI 48109 USA