• HOME
• ABOUT OPM
• DOWNLOAD OPM FILES
• CONTACT US
• PPM SERVER
• LIPID COMPOSITION ATLAS

• Protein Classification

• Types (3 types)
• Classes (11 classes)
• Superfamilies (392 superfamilies)
• Families (667 families)
• Species (538 species)
• Localization (24 types)
• All proteins in OPM (2172 proteins)

• Protein Links

• PDB Sum,
• PDB,
• OCA,
• MPKS,
• PDBTM,
• MPDB,
• CGDB

1yew » Particulate methane monooxygenase

• Type: 1. Transmembrane (3 classes)
• Class: 1.1. Alpha-helical polytopic (72 superfamilies)
• Superfamily: 1.1.50. Methane monooxygenase (1 family)
• Family: 1.1.50.01. Methane monooxygenase (4 proteins)
• Species: Methylococcus capsulatus (2 proteins)
• Localization: Bacterial Gram-negative inner membrane (269 proteins)

1yew » Particulate methane monooxygenase
Hydrophobic Thickness	28.2 ± 0.7 Å
Tilt Angle	0 ± 0°
ΔGtransfer	-188.5 kcal/mol
Links to 1yew	PDB Sum, PDB, SCOP, MSD, OCA, MMDB
Topology	subunit B (N-terminus in)
Resolution	2.80 Å
Other PDB entries of this protein	none
Number of TM Secondary Structures	42

9 transmembrane subunits
A - Tilt: 5° - Segments: 1(189-207), 2(233-251)
B - Tilt: 5° - Segments: 1(23-45), 2(62-80), 3(88-107), 4(125-137), 5(141-160), 6(200-211), 7(225-239)
C - Tilt: 5° - Segments: 1(49-69), 2(91-109), 3(136-156), 4(174-193), 5(253-258)
E - Tilt: 5° - Segments: 1(189-207), 2(233-251)
F - Tilt: 5° - Segments: 1(23-45), 2(62-80), 3(88-107), 4(125-137), 5(141-160), 6(200-211), 7(225-239)
G - Tilt: 4° - Segments: 1(49-69), 2(91-109), 3(136-156), 4(174-193), 5(253-258)
I - Tilt: 5° - Segments: 1(189-207), 2(233-251)
J - Tilt: 5° - Segments: 1(23-45), 2(62-80), 3(88-107), 4(125-137), 5(141-160), 6(200-211), 7(225-239)
K - Tilt: 5° - Segments: 1(49-69), 2(91-109), 3(136-156), 4(174-193), 5(253-258)

Copyright © 2005-2013 Andrei Lomize, Mikhail Lomize and Irina Pogozheva
University of Michigan, Ann Arbor, MI 48109 USA