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• Protein Classification

• Types (3 types)
• Classes (11 classes)
• Superfamilies (392 superfamilies)
• Families (667 families)
• Species (538 species)
• Localization (24 types)
• All proteins in OPM (2172 proteins)

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2f2b » Aquaporin AqpM

• Type: 1. Transmembrane (3 classes)
• Class: 1.1. Alpha-helical polytopic (72 superfamilies)
• Superfamily: 1.1.14. Major Intrinsic Protein (MIP)/FNT superfamily (2 families) 1.A.8 (TCDB)
• Family: 1.1.14.01. Major intrinsic protein (MIP) family (20 proteins) 1.A.8 (TCDB)
• Species: Methanobacterium thermoautotrophicum (2 proteins)
• Localization: Archaebacterial membrane (54 proteins)

2f2b » Aquaporin AqpM
Hydrophobic Thickness	29.0 ± 0.8 Å
Tilt Angle	0 ± 0°
ΔGtransfer	-129.9 kcal/mol
Links to 2f2b	PDB Sum, PDB, SCOP, MSD, OCA, MMDB
Topology	subunit A (N-terminus cytoplasmic)
Resolution	1.7 Å
Other PDB entries of this protein	2evu
Number of TM Secondary Structures	32

4 transmembrane subunits
A - Tilt: 8° - Segments: 1(8-29), 2(52-74), 3(83-91), 4(100-122), 5(143-164), 6(175-192), 7(200-213), 8(220-240)
B - Tilt: 8° - Segments: 1(8-29), 2(52-74), 3(83-91), 4(100-122), 5(143-164), 6(175-192), 7(200-213), 8(220-240)
C - Tilt: 8° - Segments: 1(8-29), 2(52-74), 3(83-91), 4(100-122), 5(143-164), 6(175-192), 7(200-213), 8(220-240)
D - Tilt: 8° - Segments: 1(8-29), 2(52-74), 3(83-91), 4(100-122), 5(143-164), 6(175-192), 7(200-213), 8(220-240)

Copyright © 2005-2013 Andrei Lomize, Mikhail Lomize and Irina Pogozheva
University of Michigan, Ann Arbor, MI 48109 USA