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• Protein Classification

• Types (3 types)
• Classes (11 classes)
• Superfamilies (392 superfamilies)
• Families (667 families)
• Species (538 species)
• Localization (24 types)
• All proteins in OPM (2172 proteins)

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2ixw » Osmoporin OMPC, isoform 2

• Type: 1. Transmembrane (3 classes)
• Class: 1.3. Beta-barrel transmembrane (26 superfamilies)
• Superfamily: 1.3.16. Trimeric porins (n=16,S=20) (4 families)
• Family: 1.3.16.01. General Bacterial Porin (GBP) (11 proteins) 1.B.1 (TCDB)
• Species: Escherichia coli (178 proteins)
• Localization: Bacterial Gram-negative outer membrane (136 proteins)

2ixw » Osmoporin OMPC, isoform 2
Hydrophobic Thickness	24.5 ± 1.0 Å
Tilt Angle	0 ± 0°
ΔGtransfer	-121.0 kcal/mol
Links to 2ixw	PDB Sum, PDB, SCOP, MSD, OCA, MMDB
Topology	subunit A (N-terminus out)
Resolution	2.70 Å
Other PDB entries of this protein	2xe2, 2xe3, 2xe5, 2xg6
Number of TM Secondary Structures	48

3 transmembrane subunits
A - Tilt: 2° - Segments: 1(11-23), 2(32-43), 3(52-62), 4(70-82), 5(86-92), 6(127-134), 7(143-150), 8(176-185), 9(188-195), 10(217-226), 11(229-236), 12(256-264), 13(268-275), 14(294-302), 15(307-315), 16(335-342)
B - Tilt: 2° - Segments: 1(11-23), 2(32-43), 3(52-62), 4(70-82), 5(86-92), 6(127-134), 7(143-151), 8(176-185), 9(188-195), 10(217-226), 11(229-236), 12(256-264), 13(268-275), 14(294-302), 15(307-315), 16(335-342)
C - Tilt: 2° - Segments: 1(11-23), 2(32-43), 3(52-62), 4(70-82), 5(86-92), 6(127-134), 7(143-151), 8(176-185), 9(188-195), 10(217-226), 11(229-236), 12(256-264), 13(268-275), 14(294-302), 15(307-315), 16(335-342)

Copyright © 2005-2013 Andrei Lomize, Mikhail Lomize and Irina Pogozheva
University of Michigan, Ann Arbor, MI 48109 USA