• HOME
• ABOUT OPM
• DOWNLOAD OPM FILES
• CONTACT US
• PPM SERVER
• LIPID COMPOSITION ATLAS

• Protein Classification

• Types (3 types)
• Classes (11 classes)
• Superfamilies (393 superfamilies)
• Families (668 families)
• Species (539 species)
• Localization (24 types)
• All proteins in OPM (2185 proteins)

• Protein Links

• PDB Sum,
• PDB,
• OCA,
• MPKS,
• PDBTM,
• MPDB,
• CGDB

2k4t » VDAC-1 channel, NMR model

• Type: 1. Transmembrane (3 classes)
• Class: 1.3. Beta-barrel transmembrane (27 superfamilies)
• Superfamily: 1.3.22. Mitochondrial and plastid porins (n=19,S=20) (1 family) 1.B.8 (TCDB)
• Family: 1.3.22.01. Voltage-dependent anion channel (VDAC) porin (3 proteins) 1.B.8 (TCDB)
• Species: Homo sapiens (443 proteins)
• Localization: Mitochondrial outer membrane (20 proteins)

2k4t » VDAC-1 channel, NMR model
Hydrophobic Thickness	22.0 ± 1.5 Å
Tilt Angle	1 ± 1°
ΔGtransfer	-34.8 kcal/mol
Links to 2k4t	PDB Sum, PDB, SCOP, MSD, OCA, MMDB
Topology	subunit A (N-terminus intermembrane space)
Resolution	NMR
Other PDB entries representing this structure	2jk4
Number of TM Secondary Structures	19

1 transmembrane subunit
A - Tilt: 1° - Segments: 1(25-33), 2(39-47), 3(54-62), 4(69-77), 5(80-87), 6(95-102), 7(111-118), 8(123-131), 9(137-145), 10(149-157), 11(167-175), 12(178-185), 13(190-197), 14(202-209), 15(219-226), 16(231-238), 17(243-250), 18(255-262), 19(275-281)

Comments on 2k4t » VDAC-1 channel, NMR model
Structure in LDAO micelles.

Copyright © 2005-2013 Andrei Lomize, Mikhail Lomize and Irina Pogozheva
University of Michigan, Ann Arbor, MI 48109 USA