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• Protein Classification

• Types (3 types)
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2yev » Bacterial cytochrome c oxidase, caa3-type

• Type: 1. Transmembrane (3 classes)
• Class: 1.1. Alpha-helical polytopic (72 superfamilies)
• Superfamily: 1.1.07. Electron transport chain complex IV (cytochrome c oxidase) (1 family) 3.D.4 (TCDB)
• Family: 1.1.07.01. Cytochrome c oxidases (10 proteins) 3.D.4 (TCDB)
• Species: Thermus thermophilus (15 proteins)
• Localization: Bacterial Gram-negative inner membrane (269 proteins)

2yev » Bacterial cytochrome c oxidase, caa3-type
Hydrophobic Thickness	31.2 ± 0.8 Å
Tilt Angle	6 ± 0°
ΔGtransfer	-146.1 kcal/mol
Links to 2yev	PDB Sum, PDB, SCOP, MSD, OCA, MMDB
Topology	subunit A (N-terminus in)
Resolution	2.36 Å
Other PDB entries of this protein	none
Number of TM Secondary Structures	21

3 transmembrane subunits
A - Tilt: 4° - Segments: 1( 27- 53), 2( 66- 92), 3( 109- 130), 4( 153- 175), 5( 197- 221), 6( 240- 264), 7( 281- 302), 8( 309- 333), 9( 348- 370), 10( 380- 403), 11( 418- 442), 12( 461- 485), 13( 556- 574), 14( 580- 597), 15( 620- 641), 16( 657- 677), 17( 691- 711), 18( 728- 752), 19( 766- 789)
B - Tilt: 10° - Segments: 1( 37- 59), 2( 83- 104)
C - Tilt: 31° - Segments: 1( 6- 22), 2( 35- 59)

Copyright © 2005-2013 Andrei Lomize, Mikhail Lomize and Irina Pogozheva
University of Michigan, Ann Arbor, MI 48109 USA