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• Protein Classification

• Types (3 types)
• Classes (11 classes)
• Superfamilies (393 superfamilies)
• Families (668 families)
• Species (539 species)
• Localization (24 types)
• All proteins in OPM (2185 proteins)

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3kdp » Sodium-potassium pump, E2-Pi state, slightly different conf.

• Type: 1. Transmembrane (3 classes)
• Class: 1.1. Alpha-helical polytopic (72 superfamilies)
• Superfamily: 1.1.09. P-type ATPase (P-ATPase) (1 family) 3.A.3 (TCDB)
• Family: 1.1.09.01. P-ATPase (35 proteins) 3.A.3 (TCDB)
• Species: Sus scrofa (25 proteins)
• Localization: Eukaryotic plasma membrane (483 proteins)

3kdp » Sodium-potassium pump, E2-Pi state, slightly different conf.
Hydrophobic Thickness	31.4 ± 1.4 Å
Tilt Angle	7 ± 0°
ΔGtransfer	-95.3 kcal/mol
Links to 3kdp	PDB Sum, PDB, SCOP, MSD, OCA, MMDB
Topology	subunit A (N-terminus cytoplasmic)
Resolution	3.50 Å
Other PDB entries representing this structure	none
Number of TM Secondary Structures	12

3 transmembrane subunits
A - Tilt: 11° - Segments: 1(92-107), 2(121-142), 3(284-306), 4(313-336), 5(767-788), 6(797-815), 7(842-864), 8(911-931), 9(945-963), 10(984-998)
B - Tilt: 35° - Segments: 1(33-57)
G - Tilt: 12° - Segments: 1(28-47)

Copyright © 2005-2013 Andrei Lomize, Mikhail Lomize and Irina Pogozheva
University of Michigan, Ann Arbor, MI 48109 USA