• HOME
• ABOUT OPM
• DOWNLOAD OPM FILES
• CONTACT US
• PPM SERVER
• LIPID COMPOSITION ATLAS

• Protein Classification

• Types (3 types)
• Classes (11 classes)
• Superfamilies (392 superfamilies)
• Families (667 families)
• Species (538 species)
• Localization (24 types)
• All proteins in OPM (2172 proteins)

• Protein Links

• PDB Sum,
• PDB,
• OCA,
• MPKS,
• PDBTM,
• MPDB,
• CGDB

3kly » Formate transporter 1, FocA

• Type: 1. Transmembrane (3 classes)
• Class: 1.1. Alpha-helical polytopic (72 superfamilies)
• Superfamily: 1.1.14. Major Intrinsic Protein (MIP)/FNT superfamily (2 families) 1.A.8 (TCDB)
• Family: 1.1.14.02. Formate/Nitrite transporter (FNT) family (5 proteins) 2.A.44 (TCDB)
• Species: Vibrio cholerae (8 proteins)
• Localization: Bacterial Gram-negative inner membrane (269 proteins)

3kly » Formate transporter 1, FocA
Hydrophobic Thickness	31.4 ± 0.5 Å
Tilt Angle	1 ± 0°
ΔGtransfer	-188.2 kcal/mol
Links to 3kly	PDB Sum, PDB, SCOP, MSD, OCA, MMDB
Topology	subunit A (N-terminus in)
Resolution	2.10 Å
Other PDB entries of this protein	3klz
Number of TM Secondary Structures	35

5 transmembrane subunits
A - Tilt: 10° - Segments: 1(33-55), 2(64-84), 3(109-134), 4(160-182), 5(187-204), 6(209-222), 7(246-272)
B - Tilt: 8° - Segments: 1(30-55), 2(64-85), 3(109-134), 4(160-182), 5(187-204), 6(209-222), 7(246-272)
C - Tilt: 8° - Segments: 1(33-55), 2(63-84), 3(89-94), 4(109-134), 5(160-182), 6(187-204), 7(209-222), 8(246-271)
D - Tilt: 8° - Segments: 1(33-55), 2(63-84), 3(109-134), 4(160-182), 5(187-204), 6(209-222), 7(246-271)
E - Tilt: 9° - Segments: 1(33-55), 2(64-84), 3(109-134), 4(160-182), 5(187-204), 6(209-222), 7(246-271)

Copyright © 2005-2013 Andrei Lomize, Mikhail Lomize and Irina Pogozheva
University of Michigan, Ann Arbor, MI 48109 USA