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• Protein Classification

• Types (3 types)
• Classes (11 classes)
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• Species (538 species)
• Localization (24 types)
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3mk7 » Bacterial cytochrome c oxidase, cbb3 type

• Type: 1. Transmembrane (3 classes)
• Class: 1.1. Alpha-helical polytopic (72 superfamilies)
• Superfamily: 1.1.07. Electron transport chain complex IV (cytochrome c oxidase) (1 family) 3.D.4 (TCDB)
• Family: 1.1.07.01. Cytochrome c oxidases (10 proteins) 3.D.4 (TCDB)
• Species: Pseudomonas stutzeri (3 proteins)
• Localization: Bacterial Gram-negative inner membrane (269 proteins)

3mk7 » Bacterial cytochrome c oxidase, cbb3 type
Hydrophobic Thickness	32.8 ± 1.2 Å
Tilt Angle	4 ± 4°
ΔGtransfer	-119.2 kcal/mol
Links to 3mk7	PDB Sum, PDB, SCOP, MSD, OCA, MMDB
Topology	subunit A (N-terminus in)
Resolution	3.20 Å
Other PDB entries of this protein	none
Number of TM Secondary Structures	17

3 transmembrane subunits
A - Tilt: 6° - Segments: 1(16-40), 2(53-78), 3(93-115), 4(128-146), 5(160-179), 6(197-223), 7(239-258), 8(267-288), 9(309-328), 10(330-338), 11(340-363), 12(383-408), 13(429-456)
B - Tilt: 11° - Segments: 1(12-35)
C - Tilt: 20° - Segments: 1(4-27), 2(57-75)

Comments on 3mk7 » Bacterial cytochrome c oxidase, cbb3 type
There is an additional TM helix of unknown sequence.

Copyright © 2005-2013 Andrei Lomize, Mikhail Lomize and Irina Pogozheva
University of Michigan, Ann Arbor, MI 48109 USA