• HOME
• ABOUT OPM
• DOWNLOAD OPM FILES
• CONTACT US
• PPM SERVER
• LIPID COMPOSITION ATLAS

• Protein Classification

• Types (3 types)
• Classes (11 classes)
• Superfamilies (393 superfamilies)
• Families (668 families)
• Species (539 species)
• Localization (24 types)
• All proteins in OPM (2185 proteins)

• Protein Links

• PDB Sum,
• PDB,
• OCA,
• MPKS,
• PDBTM,
• MPDB,
• CGDB

3ohn » Outer membrane usher protein FimD

• Type: 1. Transmembrane (3 classes)
• Class: 1.3. Beta-barrel transmembrane (27 superfamilies)
• Superfamily: 1.3.21. Fimbrial usher porin (n=24,S=26) (1 family) 1.B.11 (TCDB)
• Family: 1.3.21.01. Fimbrial usher porin (4 proteins) 1.B.11 (TCDB)
• Species: Escherichia coli (182 proteins)
• Localization: Bacterial Gram-negative outer membrane (137 proteins)

3ohn » Outer membrane usher protein FimD
Hydrophobic Thickness	21.2 ± 1.1 Å
Tilt Angle	5 ± 0°
ΔGtransfer	-45.4 kcal/mol
Links to 3ohn	PDB Sum, PDB, SCOP, MSD, OCA, MMDB
Topology	subunit A (N-terminus in)
Resolution	3.01 Å
Other PDB entries representing this structure	3rfz
Number of TM Secondary Structures	24

1 transmembrane subunit
A - Tilt: 5° - Segments: 1( 141- 150), 2( 162- 172), 3( 175- 183), 4( 198- 207), 5( 215- 220), 6( 235- 242), 7( 329- 337), 8( 350- 357), 9( 363- 371), 10( 377- 384), 11( 392- 397), 12( 413- 420), 13( 429- 435), 14( 483- 490), 15( 498- 504), 16( 516- 523), 19( 530- 536), 20( 548- 555), 21( 575- 582), 22( 588- 595), 23( 602- 610), 24( 621- 629), 25( 633- 641), 26( 647- 654)

Copyright © 2005-2013 Andrei Lomize, Mikhail Lomize and Irina Pogozheva
University of Michigan, Ann Arbor, MI 48109 USA