PDB ID or protein name

5iy5 » Mitochondrial cytochrome c oxidase, with cytochrome c

5iy5 » Mitochondrial cytochrome c oxidase, with cytochrome c
Magnify 5iy5 » Mitochondrial cytochrome c oxidase, with cytochrome cEnlarged view of image
3D view in Jmol or Webmol

gray dot

Download Coordinates

gray dot

Topology in Mitochondrial inner membrane
Topologyintermembrane space side
matrix space side
5iy5 » Mitochondrial cytochrome c oxidase, with cytochrome c
Hydrophobic Thickness 25.8 ± 1.2 Å
Tilt Angle 0 ± 0°
ΔGtransfer -204.7 kcal/mol
Links to 5iy5 PDB Sum, PDB, SCOP, MSD, OCA, MMDB
Topology subunit A (N-terminus matrix space)
Resolution 2.0 Å
Other PDB entries representing this structure none
Number of TM Secondary Structures 56
20 transmembrane subunits
A - Tilt: 9° - Segments: 1( 18- 38), 2( 57- 78), 3( 99- 117), 4( 143- 162), 5( 186- 208), 6( 234- 255), 7( 271- 288), 8( 307- 325), 9( 336- 356), 10( 374- 393), 11( 409- 429), 12( 453- 472)
B - Tilt: 12° - Segments: 1( 29- 47), 2( 59- 76)
C - Tilt: 4° - Segments: 1( 17- 35), 2( 41- 55), 3( 82- 99), 4( 128- 146), 5( 162- 181), 6( 199- 217), 7( 237- 255)
D - Tilt: 38° - Segments: 1( 78- 99)
G - Tilt: 21° - Segments: 1( 16- 37)
I - Tilt: 12° - Segments: 1( 16- 32)
J - Tilt: 29° - Segments: 1( 34- 54)
K - Tilt: 16° - Segments: 1( 14- 32)
L - Tilt: 14° - Segments: 1( 22- 42)
M - Tilt: 22° - Segments: 1( 16- 36)
N - Tilt: 10° - Segments: 1( 18- 38), 2( 57- 78), 3( 99- 117), 4( 143- 162), 5( 186- 208), 6( 234- 255), 7( 271- 288), 8( 307- 325), 9( 336- 356), 10( 374- 393), 11( 409- 429), 12( 453- 472)
O - Tilt: 12° - Segments: 1( 29- 47), 2( 59- 76)
P - Tilt: 5° - Segments: 1( 17- 35), 2( 41- 54), 3( 82- 99), 4( 128- 146), 5( 162- 181), 6( 199- 217), 7( 237- 255)
Q - Tilt: 38° - Segments: 1( 78- 99)
T - Tilt: 22° - Segments: 1( 16- 37)
V - Tilt: 9° - Segments: 1( 16- 32)
W - Tilt: 29° - Segments: 1( 34- 54)
X - Tilt: 17° - Segments: 1( 14- 32)
Y - Tilt: 15° - Segments: 1( 22- 42)
Z - Tilt: 22° - Segments: 1( 16- 36)