PDB ID or protein name

All proteins in OPM (725 proteins)

Family Protein Name PDB ID Species Localization Num. Subunits Num. TM Sec. Structs. Hydrophobic Thickness or Depth (Å) Tilt Angle (°) ΔGtransfer (kcal/mol)
1.1.01.01. Sensory Rhodopsin 1xio Anabaena sp. Bact. gram-neg inner 1 7 31.2 ± 2.8 8 ± 6 -71.7
1.1.01.01. Archaerhodopsin-2, trimeric 2ei4 Halobacterium sp. Archaebac. 3 21 30.1 ± 0.9 0 ± 1 -158.4
1.1.01.01. Archaerhodopsin-2 1vgo Halobacterium sp. Archaebac. 1 7 30.8 ± 1.5 9 ± 4 -81.8
1.1.01.01. Archaerhodopsin-1 1uaz Halobacterium sp. Archaebac. 1 7 31.7 ± 2.2 6 ± 4 -73.9
1.1.01.01. Bacteriorhodopsin, monomer 1py6 Halobacterium salinarum Archaebac. 1 7 31.0 ± 2.5 13 ± 6 -75.9
1.1.01.01. Halorhodopsin 1e12 Halobacterium salinarum Archaebac. 3 21 30.9 ± 1.8 0 ± 1 -151.6
1.1.01.01. Bacteriorhodopsin, trimer 1m0l Halobacterium salinarum Archaebac. 3 21 30.0 ± 1.1 0 ± 1 -149.5
1.1.01.01. Sensory rhodopsin II, monomer 1h68 Natronomonas pharaonis Archaebac. 1 7 31.6 ± 2.5 12 ± 5 -76.2
1.1.01.01. Sensory rhodopsin II 1h2s Natronomonas pharaonis Archaebac. 4 18 29.5 ± 1.1 0 ± 2 -160.0
1.1.01.02. Melanocortin-4 receptor model (inactive state) with antagonist AGRP 2iqv Homo sapiens Eukaryo. plasma 1 7 33.5 ± 1.5 19 ± 3 -75.3
1.1.01.02. Melanocortin-4 receptor model (active state) with agonist NDP-MSH 2iqr Homo sapiens Eukaryo. plasma 1 7 34.5 ± 1.5 18 ± 3 -80.2
1.1.01.02. Cholecystokinin A receptor fragment 1d6g Homo sapiens Eukaryo. plasma 2 0 8.0 ± 0.8 89 ± 7 -16.1
1.1.01.02. Rhodopsin 1gzm Bos taurus Eukaryo. plasma 1 7 32.4 ± 1.7 8 ± 3 -91.3
1.1.01.02. Mu-opioid receptor model (inactive state) with antagonist 2iql Rattus norvegicus Eukaryo. plasma 1 7 35.0 ± 1.0 9 ± 3 -97.7
1.1.01.02. Mu-opioid receptor model in active state with agonist 2iqo Rattus norvegicus Eukaryo. plasma 1 7 35.3 ± 1.6 1 ± 4 -95.7
1.1.01.02. Metarhodopsin II model 2iqk Bos taurus Eukaryo. plasma 1 7 31.7 ± 1.5 9 ± 3 -96.5
1.1.01.02. Rhodopsin, a dimer 2i36 Bos taurus Eukaryo. plasma 2 14 30.5 ± 1.4 0 ± 1 -161.5
1.1.01.02. Rhodopsin, a photobleached state 2i37 Bos taurus Eukaryo. plasma 1 7 31.9 ± 1.4 5 ± 4 -88.6
1.1.01.02. Beta2-adrenergic receptor 2rh1 Homo sapiens Eukaryo. plasma 1 7 31.4 ± 1.3 8 ± 3 -84.3
1.1.02.01. Photosynthetic reaction center 1eys Thermochromatium tepidum Bact. gram-neg inner 3 11 30.0 ± 1.5 4 ± 1 -133.8
1.1.02.01. Photosynthetic reaction center 1rzh Rhodobacter sphaeroides Bact. gram-neg inner 3 11 30.0 ± 1.2 5 ± 1 -141.0
1.1.02.01. Photosynthetic reaction center 1dxr Rhodopseudomonas viridis Bact. gram-neg inner 3 11 30.5 ± 1.8 6 ± 1 -138.5
1.1.02.02. Photosystem I 1jb0 Thermosynechococcus elongatus Thylakoid 9 32 32.0 ± 0.8 1 ± 1 -345.1
1.1.02.02. Photosystem I 2o01 Pisum sativum Thylakoid 16 43 27.5 ± 0.5 3 ± 1 -791.8
1.1.02.03. Photosystem II 2axt Thermosynechococcus elongatus Thylakoid 30 72 30.7 ± 0.7 0 ± 1 -485.2
1.1.03.01. Light-harvesting complex LH3 1ijd Rhodopseudomonas acidophila Bact. gram-neg inner 18 18 26.2 ± 0.8 0 ± 0 -205.4
1.1.03.01. Light-harvesting complex LH2 1nkz Rhodopseudomonas acidophila Bact. gram-neg inner 18 18 27.8 ± 0.8 0 ± 0 -246.8
1.1.03.01. Light-harvesting complex 1lgh Rhodospirillum molischianum Bact. gram-neg inner 16 16 28.7 ± 0.9 0 ± 1 -187.3
1.1.03.02. Light-Harvesting Complex II 2bhw Pisum sativum Thylakoid 3 9 28.0 ± 1.0 0 ± 1 -160.4
1.1.03.02. Light-Harvesting Complex II 1rwt Spinacia oleracea Thylakoid 3 9 28.0 ± 1.3 0 ± 1 -198.2
1.1.04.01. Cytochrome bc1, mitochondrial 1bcc Gallus gallus Mitochon. inner 10 24 26.1 ± 1.0 0 ± 1 -203.0
1.1.04.01. Cytochrome bc1, bacterial