PDB ID or protein name

All proteins in OPM (3481 proteins)

Family Protein Name PDB ID Species Localization Num. Subunits Num. TM Sec. Structs. Hydrophobic Thickness or Depth (Å) Tilt Angle (°) ΔGtransfer (kcal/mol)
1.1.10.02. Molybdate transporter ModBC, open state 3d31 Methanosarcina acetivorans Archaebac. 2 12 29.8 ± 1.5 1 ± 0 -91.6
1.1.11.01. Protein translocase SecY, closed state, mutant 1rh5 Methanococcus jannaschii Archaebac. 3 12 29.0 ± 1.1 10 ± 0 -93.4
1.1.12.10. Potassium channel KvAP, sensor domain 1ors Aeropyrum pernix Archaebac. 1 5 31.5 ± 2.2 19 ± 1 -50.3
1.1.12.10. Potassium channel KvAP, complex with Fab 1orq Aeropyrum pernix Archaebac. 4 12 29.3 ± 1.6 0 ± 0 -78.6
1.1.01.01. Bacteriorhodopsin 1m0l Halobacterium salinarum Archaebac. 3 21 31.8 ± 1.1 0 ± 1 -121.1
1.1.01.01. Sensory rhodopsin II, tetramer, structure 1 1h2s Natronomonas pharaonis Archaebac. 4 18 30.5 ± 1.1 0 ± 0 -123.4
1.1.01.01. Halorhodopsin 1e12 Halobacterium salinarum Archaebac. 3 21 31.8 ± 1.4 0 ± 1 -126.7
1.1.01.01. Archaerhodopsin-1 1uaz Halobacterium sp. Archaebac. 1 7 31.8 ± 1.3 9 ± 2 -65.3
1.1.01.01. Bacteriorhodopsin, K state, with lipids 1iw6 Halobacterium salinarum Archaebac. 3 21 30.0 ± 0.6 0 ± 0 -112.6
1.1.01.01. Bacteriorhodopsin, trimer, complex with annular lipids 2zzl Halobacterium salinarum Archaebac. 3 21 29.8 ± 0.6 0 ± 0 -119.0
1.1.01.01. Sensory rhodopsin II, monomer 1h68 Natronomonas pharaonis Archaebac. 1 7 30.3 ± 1.5 15 ± 2 -60.0
1.1.01.01. Bacteriorhodopsin, monomer 1py6 Halobacterium salinarum Archaebac. 1 7 29.6 ± 2.2 24 ± 8 -59.7
1.1.17.01. Ammonium transporter Amt-1 2b2f Archaeoglobus fulgidus Archaebac. 3 33 28.9 ± 0.7 0 ± 0 -152.5
1.1.01.01. Archaerhodopsin-2, monomer 1vgo Halobacterium sp. Archaebac. 1 7 30.7 ± 1.3 18 ± 2 -73.1
1.1.12.10. Potassium channel KvAP 2a0l Aeropyrum pernix Archaebac. 4 12 29.5 ± 1.1 0 ± 0 -100.0
1.1.14.01. Aquaporin AqpM 2f2b Methanobacterium thermoautotrophicum Archaebac. 4 32 29.0 ± 0.8 0 ± 0 -129.9
1.1.11.01. Protein translocase SecY, complex with ribosome 2 3bo0 Methanococcus jannaschii Archaebac. 3 12 29.6 ± 1.2 6 ± 2 -78.0
1.1.57.01. Peptidase A24B, FlaK domain protein 3s0x Methanococcus maripaludis Archaebac. 1 6 31.8 ± 1.6 40 ± 2 -67.7
2.3.01.02. Beta-glycosidase 1vff Pyrococcus horikoshii Archaebac. 1 0 3.9 ± 1.6 39 ± 10 -9.7
1.1.38.01. H+-driven MATE exporter, outward-open, straight conformation 3wbn Pyrococcus furiosus Archaebac. 1 12 31.8 ± 1.4 8 ± 0 -88.2
1.1.38.01. H+-driven MATE exporter, outward-open, "bent" conformation 3vvo Pyrococcus furiosus Archaebac. 1 12 31.4 ± 1.1 11 ± 0 -93.1
1.1.38.01. H+-driven MATE exporter, outward-open, with nonpeptide inhibitor 3vvp Pyrococcus furiosus Archaebac. 1 12 29.8 ± 1.3 8 ± 0 -79.6
1.1.14.01. Aquaporin AqpM 3ne2 Archaeoglobus fulgidus Archaebac. 4 24 31.2 ± 1.3 0 ± 0 -143.5
1.1.09.01. Copper efflux ATPase, CopA 3j08 Archaeoglobus fulgidus Archaebac. 2 16 27.6 ± 0.8 0 ± 0 -72.3
1.1.10.02. Molybdate transporter ModBC, open state 2onk Archaeoglobus fulgidus Archaebac. 2 12 32.0 ± 1.7 0 ± 1 -100.7
1.1.59.01. Membrane protease specific for a stomatin homolog, monomer 3bpp Pyrococcus horikoshii Archaebac. 1 0 4.0 ± 0.4 82 ± 5 -6.3
1.1.32.01. Proton glutamate symport protein, outward-facing state 1 2nwl Pyrococcus horikoshii Archaebac. 3 39 29.8 ± 1.3 0 ± 0 -202.1
1.1.01.01. Bacteriorhodopsin, from cubic phase 1ap9 Halobacterium salinarum Archaebac. 3 21 30.6 ± 1.2 0 ± 0 -97.8
1.1.01.01. Archaerhodopsin-2, trimeric 2ei4 Halobacterium sp. Archaebac. 3 21 30.5 ± 1.2 0 ± 1 -143.9
1.1.58.01. Site-2 protease (S2P) metalloprotease 3b4r Methanococcus jannaschii Archaebac. 1 6 29.9 ± 1.4 23 ± 0 -65.0
1.1.26.05. Amino acid transporter ApcT, inward-facing conformation 3gia Methanococcus jannaschii Archaebac. 1 12 29.9 ± 1.4 11 ± 2 -92.1
1.1.32.01. Proton glutamate symport protein, inward-facing state 1 3kbc Pyrococcus horikoshii Archaebac. 3 30 28.1 ± 0.9 0 ± 1 -158.8
1.1.01.01. Halorhodopsin 3a7k Natronomonas pharaonis Archaebac. 3 21 33.8 ± 1.4 1 ± 0 -141.3
1.1.11.01. Protein translocase SecY, mutant with full-plug (TM2a) deletion 2yxr Methanococcus jannaschii Archaebac. 3 12 29.7 ± 0.8 4 ± 4 -95.6
1.1.12.10. Potassium channel KvAP, sensor domain, NMR model 2kyh Aeropyrum pernix Archaebac. 1 5 28.6 ± 1.4 19 ± 4 -44.6
1.1.12.05. Calcium-gated potassium channel MthK 3ldc Methanobacterium thermoautotrophicum Archaebac. 4 8 29.8 ± 0.8 0 ± 0 -72.4
1.1.11.01. Protein translocase SecY, partialy open 3mp7 Pyrococcus furiosus Archaebac. 2 10 30.1 ± 1.0 5 ± 6 -94.0
1.1.11.01. Protein translocase SecY, complex with ribosome 1 3dkn Methanococcus jannaschii Archaebac. 3 12 27.8 ± 1.8 2 ± 0 -80.9
2.3.06.12. Carboxylesterase (EstA) 1jji Archaeoglobus fulgidus Archaebac. 1 0 2.8 ± 1.0 56 ± 22 -4.8
2.4.05.01. Uncharacterized protein 3cnu Archaeoglobus fulgidus Archaebac. 1 0 7.6 ± 1.7 69 ± 20 -7.0
1.1.09.01. Copper efflux ATPase, CopA, alternative conformation 3j09 Archaeoglobus fulgidus Archaebac. 2 16 27.0 ± 0.1 1 ± 0 -23.5
1.1.53.01. Integral Membrane Methyltransferase 4a2n Methanosarcina acetivorans Archaebac. 1 5 30.6 ± 1.2 10 ± 2 -58.3
2.2.09.03. Surface layer protein 1l0q Methanosarcina mazei (Methanosarcina frisia) Archaebac. 1 0 3.1 ± 0.9 81 ± 7 -5.1
1.1.64.01. Sodium/calcium exchanger, structure 1 3v5u Methanococcus jannaschii Archaebac. 1 10 29.8 ± 0.9 3 ± 0 -78.4
1.1.59.01. Membrane protease specific for a stomatin homolog, dimer 3viv Pyrococcus horikoshii Archaebac. 2 0 4.5 ± 0.4 88 ± 9 -9.5
1.1.21.01. Magnesium transport protein CorA 4ev6 Methanococcus jannaschii Archaebac. 5 10 28.4 ± 1.5 0 ± 1 -92.4
1.1.57.02. Intramembrane aspartate protease 4hyg Methanoculleus marisnigri Archaebac. 3 27 31.8 ± 0.3 0 ± 0 -172.7
1.1.01.01. Bacteriorhodopsin, different loop conformaton 1fbk Halobacterium salinarum Archaebac. 3 21 30.0 ± 1.2 0 ± 0 -127.8
1.1.11.01. Protein translocase SecY, mutant with half-plug (TM2a) deletion 2yxq Methanococcus jannaschii Archaebac. 3 12 29.2 ± 1.1 6 ± 0 -89.1
1.1.11.01. Protein translocase SecY, closed state 1rhz Methanococcus jannaschii Archaebac. 3 12 29.4 ± 1.0 5 ± 0 -89.2
1.1.32.01. Proton glutamate symport protein, outward-facing state 2 2nww Pyrococcus horikoshii Archaebac. 3 36 30.6 ± 0.6 0 ± 0 -200.2
1.1.32.01. Proton glutamate symport protein, mixed inward/outward trimer 3v8g Pyrococcus horikoshii Archaebac. 3 30 29.8 ± 1.0 5 ± 0 -169.4
1.1.64.01. Sodium/calcium exchanger, structure 2 3v5s Methanococcus jannaschii Archaebac. 1 10 29.6 ± 1.6 1 ± 2 -75.1
1.1.01.01. Deltarhodopsin 4fbz Haloterrigena thermotolerans Archaebac. 3 21 31.6 ± 0.8 0 ± 0 -110.6
1.1.01.01. Halorhodopsin, different conformation 3vvk Natronomonas pharaonis Archaebac. 3 21 33.6 ± 1.1 0 ± 0 -140.5
1.1.64.01. H+/Ca2+ exchanger 4kpp Archaeoglobus fulgidus Archaebac. 1 12 29.8 ± 1.4 5 ± 0 -92.3
1.1.32.01. Proton/glutamate symporter, apo 5dwy Pyrococcus kodakaraensis Archaebac. 3 24 30.8 ± 0.6 0 ± 0 -184.1
1.1.38.01. H+-driven MATE exporter, outward-open, different conformation 4mlb Pyrococcus furiosus Archaebac. 1 12 30.2 ± 1.2 5 ± 0 -88.1
1.1.11.01. Protein translocase SecY, complex with ribosome 3 1vvk Methanococcus jannaschii Archaebac. 3 12 28.6 ± 0.7 10 ± 0 -90.3
1.1.52.01. Transmembrane oligosaccharyl transferase 3wak Archaeoglobus fulgidus Archaebac. 1 13 29.8 ± 0.6 12 ± 0 -100.8
1.1.82.01. 4-hydroxybenzoate octaprenyltransferase 4od5 Aeropyrum pernix Archaebac. 1 9 29.8 ± 0.9 14 ± 1 -63.9
1.1.01.01. Cruxrhodopsin-3 4jr8 Haloarcula vallismortis Archaebac. 3 21 31.8 ± 1.2 0 ± 0 -130.4
1.1.84.01. CDP-alcohol phosphatidyltransferase 4o6m Archaeoglobus fulgidus Archaebac. 2 12 30.0 ± 1.3 3 ± 1 -96.6
1.1.32.01. Proton glutamate symport protein, inward-facing state 2 4p19 Pyrococcus horikoshii Archaebac. 3 30 30.6 ± 1.0 0 ± 0 -172.9
1.1.32.01. Proton glutamate symport protein, outward-facing state 3 5cfy Pyrococcus horikoshii Archaebac. 3 33 29.8 ± 0.3 0 ± 0 -185.9
1.1.84.01. Bifunctional IPC transferase and DIPP synthase 4mnd Archaeoglobus fulgidus Archaebac. 2 12 30.2 ± 1.0 0 ± 0 -86.4
1.1.82.01. Bacteriochlorophyll synthase 4tq4 Archaeoglobus fulgidus Archaebac. 1 9 29.2 ± 1.5 14 ± 1 -73.5
1.1.32.01. Proton glutamate symport protein, outward-facing state 4 4oye Pyrococcus horikoshii Archaebac. 3 30 28.2 ± 0.6 0 ± 0 -168.8
2.4.06.05. Thermoacidophile-specific fatty acid carrier 3w9k Sulfolobus tokodaii Archaebac. 1 0 2.7 ± 1.4 47 ± 4 -7.1
1.1.35.02. Na+/H+ antiporter 1, inward-open conformation 4czb Methanococcus jannaschii Archaebac. 26 26 27.2 ± 0.5 1 ± 0 -128.3
1.1.35.02. Na+/H+ antiporter 1, outward-open conformation 4d0a Methanococcus jannaschii Archaebac. 2 26 28.4 ± 1.0 0 ± 0 -155.0
1.1.35.02. Na+/H+ antiporter, structure 1 4cz8 Pyrococcus abyssi Archaebac. 2 26 29.8 ± 0.9 2 ± 0 -118.2
1.1.35.02. Na+/H+ antiporter, structure 2 4cz9 Pyrococcus abyssi Archaebac. 2 26 27.2 ± 0.8 1 ± 0 -116.9
1.1.01.01. Bacteriorhodopsin-I 4pxk Haloarcula marismortui Archaebac. 1 7 31.8 ± 1.4 11 ± 1 -72.7
1.1.32.01. Proton glutamate symport protein, inward-facing state 3 4x2s Pyrococcus horikoshii Archaebac. 3 30 27.0 ± 0.7 10 ± 0 -105.3
1.1.01.01. Bacteriorhodopsin-I 4qi1 Haloquadratum walsbyi Archaebac. 3 21 31.8 ± 1.2 0 ± 0 -129.9
1.1.18.01. Mechanosensitive channel MscL, expanded state 4y7j Methanosarcina acetivorans Archaebac. 5 10 26.8 ± 0.0 3 ± 0 -25.1
1.1.18.01. Mechanosensitive channel MscL, closed state 4y7k Methanosarcina acetivorans Archaebac. 5 10 31.8 ± 0.1 0 ± 0 -121.6
1.1.30.01. YidC-like protein 5c8j Methanococcus jannaschii Archaebac. 1 4 29.8 ± 1.4 42 ± 2 -42.1
1.1.01.01. Bacteriorhodopsin-I 4wav Haloquadratum walsbyi Archaebac. 1 7 30.0 ± 2.1 9 ± 3 -63.0
1.1.64.01. Sodium/calcium exchanger, structure 3 5hwy Methanococcus jannaschii Archaebac. 1 10 29.0 ± 1.7 2 ± 2 -63.7
1.1.101.01. Cytochrome C-type biogenesis protein (CcdA) 2n4x Archaeoglobus fulgidus Archaebac. 1 8 29.0 ± 2.0 10 ± 10 -38.7
1.2.12.02. Archaeal flagellin, single helix 3j1r Ignicoccus hospitalis Archaebac. 1 1 33.4 ± 4.4 22 ± 3 -29.6
1.2.12.02. Archaeal flagellin 5kyh Ignicoccus hospitalis Archaebac. 4 4 37.4 ± 2.0 18 ± 2 -75.0
1.1.32.01. Proton/glutamate symporter, substrate-bound 5e9s Pyrococcus kodakaraensis Archaebac. 3 24 31.4 ± 0.6 0 ± 0 -197.9
1.1.104.01. Trimeric intracellular cation channel 5h35 Sulfolobus solfataricus Archaebac. 3 21 27.4 ± 0.8 0 ± 0 -112.8
1.1.01.01. Sensory rhodopsin II, tetramer, structure 2 5jje Natronomonas pharaonis Archaebac. 4 18 30.2 ± 0.8 0 ± 0 -116.8
1.1.104.01. TRIC cation channel, structure 1 5wud Sulfolobus acidocaldarius Archaebac. 3 21 28.2 ± 1.0 0 ± 0 -141.2
1.1.104.01. TRIC cation channel, structure 2 5wue Sulfolobus acidocaldarius Archaebac. 3 21 28.2 ± 0.4 0 ± 0 -121.8
1.1.36.01. ClC chloride transporter 1ots Escherichia coli Bact. Gram-neg inner 2 28 29.7 ± 0.8 0 ± 0 -115.3
1.1.36.01. ClC chloride transporter 1kpl Salmonella enterica Bact. Gram-neg inner 2 28 29.3 ± 0.8 2 ± 1 -128.0
1.1.50.01. Particulate methane monooxygenase 1yew Methylococcus capsulatus Bact. Gram-neg inner 9 42 28.2 ± 0.7 0 ± 0 -188.5
1.1.19.01. Mechanosensitive channel protein MscS, expanded state 2oau Escherichia coli Bact. Gram-neg inner 7 14 31.8 ± 0.8 1 ± 1 -171.3
1.1.14.01. Aquaporin Z 1rc2 Escherichia coli Bact. Gram-neg inner 4 32 29.7 ± 1.3 0 ± 0 -118.7
1.1.14.01. Glycerol uptake facilitator 1ldf Escherichia coli Bact. Gram-neg inner 4 32 30.1 ± 0.9 0 ± 0 -147.9
1.1.17.01. Ammonia Channel 1u7g Escherichia coli Bact. Gram-neg inner 3 33 29.8 ± 1.3 0 ± 0 -148.7
1.1.25.02. Lactose permease lacY, structure at acidic pH 2cfp Escherichia coli Bact. Gram-neg inner 1 12 31.1 ± 1.4 2 ± 2 -85.4
1.1.25.01. Glycerol-3-phosphate transporter glpT 1pw4 Escherichia coli Bact. Gram-neg inner 1 12 31.2 ± 1.4 1 ± 7 -92.5
1.1.10.01. ABC transporter BtuCD, symmetric structure 1l7v Escherichia coli Bact. Gram-neg inner 2 22 30.7 ± 1.1 0 ± 1 -121.0
1.1.02.05. Light-harvesting complex LH2 1nkz Rhodopseudomonas acidophila Bact. Gram-neg inner 18 18 31.8 ± 0.6 0 ± 0 -193.5
1.1.02.05. Light-harvesting complex LH3 1ijd Rhodopseudomonas acidophila Bact. Gram-neg inner 18 18 29.8 ± 0.7 0 ± 0 -174.6
1.1.02.05. Light-harvesting complex 1lgh Rhodospirillum molischianum Bact. Gram-neg inner 16 16 29.7 ± 0.5 0 ± 0 -163.4
1.1.02.01. Photosynthetic reaction center, complex with cytochrome c 1eys Thermochromatium tepidum Bact. Gram-neg inner 3 11 31.6 ± 1.0 2 ± 0 -116.0
1.1.02.01. Photosynthetic reaction center, complex with cytochrome c 1l9b Rhodobacter sphaeroides Bact. Gram-neg inner 3 11 31.6 ± 0.8 3 ± 0 -127.3
1.1.02.01. Photosynthetic reaction center, complex with cytochrome c 1dxr Rhodopseudomonas viridis Bact. Gram-neg inner 3 11 31.8 ± 0.7 5 ± 0 -121.8
1.1.07.01. Bacterial cytochrome c oxidase 1m56 Rhodobacter sphaeroides Bact. Gram-neg inner 4 22 29.6 ± 1.8 3 ± 0 -173.7
1.1.07.01. Bacterial cytochrome c oxidase 1qle Paracoccus denitrificans Bact. Gram-neg inner 4 22 31.7 ± 1.3 4 ± 0 -167.4
1.1.07.01. Ubiquinol Oxidase 1fft Escherichia coli Bact. Gram-neg inner 3 19 29.5 ± 0.6 12 ± 0 -82.3
1.1.05.02. Formate dehydrogenase 1kqf Escherichia coli Bact. Gram-neg inner 6 15 33.7 ± 1.1 0 ± 0 -141.9
1.1.05.03. Respiratory Nitrate Reductase 1q16 Escherichia coli Bact. Gram-neg inner 2 10 30.1 ± 0.9 0 ± 0 -126.9
1.1.05.05. Fumarate reductase 1kf6 Escherichia coli Bact. Gram-neg inner 2 6 30.2 ± 1.2 14 ± 2 -65.6
1.1.05.05. Succinate dehydrogenase 1nek Escherichia coli Bact. Gram-neg inner 6 18 32.0 ± 0.6 0 ± 0 -183.5
1.1.12.13. Potassium channel Kirbac1.1, closed state 1p7b Burkholderia pseudomallei Bact. Gram-neg inner 4 8 33.1 ± 1.3 0 ± 0 -111.9
1.1.01.01. Sensory rhodopsin, monomer 1xio Nostoc sp. Bact. Gram-neg inner 1 7 31.9 ± 1.5 13 ± 4 -63.1
1.1.05.01. Polysulfide reductase, inactive state 2vpz Thermus thermophilus Bact. Gram-neg inner 2 16 29.8 ± 1.5 1 ± 0 -105.2
1.1.08.01. F1F0 ATP synthase subunit c 1a91 Escherichia coli Bact. Gram-neg inner 1 2 28.4 ± 8.0 44 ± 4 -24.2
1.1.08.01. F1F0 ATP synthase, F0 complex 1c17 Escherichia coli Bact. Gram-neg inner 13 28 34.6 ± 1.2 4 ± 0 -149.9
1.1.08.01. F-type Sodium ATPase 1yce Ilyobacter tartaricus Bact. Gram-neg inner 11 22 37.0 ± 0.5 0 ± 0 -104.0
1.1.26.05. Arginine/agmatine transporter (AdiC), substrate-bound 3l1l Escherichia coli Bact. Gram-neg inner 2 24 28.8 ± 1.4 2 ± 2 -132.0
1.1.35.01. Sodium/proton antiporter 1 (NhaA) 1zcd Escherichia coli Bact. Gram-neg inner 1 14 28.4 ± 1.4 2 ± 2 -78.6
1.1.26.01. Leucine transporter LeuT, outward-facing substrate-bound conformation 2a65 Aquifex aeolicus Bact. Gram-neg inner 2 28 29.8 ± 0.5 0 ± 0 -157.9
1.1.21.01. CorA magnesium transporter, structure 1 2bbj Thermotoga maritima Bact. Gram-neg inner 5 10 29.9 ± 1.0 0 ± 0 -80.8
1.2.12.01. Fimbrial protein, type IV pilin, monomer 2pil Neisseria gonorrhoeae Bact. Gram-neg inner 1 1 30.8 ± 5.7 21 ± 5 -24.9
1.1.05.04. Fumarate reductase 2bs2 Wolinella succinogenes Bact. Gram-neg inner 2 10 31.4 ± 1.3 2 ± 0 -118.8
2.1.08.01. Cytochrome c552 1a8c Nitrosomonas europaea Bact. Gram-neg inner 1 0 2.7 ± 1.0 80 ± 11 -4.7
2.1.08.01. Cytochrome c2 1co6 Rhodopseudomonas viridis Bact. Gram-neg inner 1 0 1.4 ± 0.7 78 ± 10 -3.3
2.1.08.01. Mono-heme c-type cytochrome ScyA 1kx7 Shewanella putrefaciens Bact. Gram-neg inner 1 0 1.8 ± 1.1 72 ± 12 -3.2
2.1.08.01. Cytochrome c551 1cor Pseudomonas stutzeri Bact. Gram-neg inner 1 0 2.6 ± 1.1 73 ± 12 -6.1
2.1.08.01. Cytochrome c551 451c Pseudomonas aeruginosa Bact. Gram-neg inner 1 0 1.4 ± 0.9 85 ± 10 -5.4
2.1.08.02. Cytochrome c4 1m70 Pseudomonas stutzeri Bact. Gram-neg inner 1 0 5.4 ± 0.8 67 ± 14 -5.6
2.1.05.02. Farnesyl diphosphate synthase (Geranyltranstransferase) 1rqj Escherichia coli Bact. Gram-neg inner 1 0 3.3 ± 0.7 87 ± 3 -7.7
2.2.05.01. Amicyanin 1sfd Paracoccus denitrificans Bact. Gram-neg inner 1 0 3.5 ± 0.8 49 ± 10 -4.0
2.2.05.01. Amicyanin 1id2 Paracoccus versutus Bact. Gram-neg inner 1 0 4.2 ± 1.3 52 ± 8 -4.9
2.2.05.01. Pseudoazurin 1pmy Methylobacterium extorquens Bact. Gram-neg inner 1 0 1.6 ± 1.4 45 ± 13 -4.3
2.2.05.01. Azurin I 1rkr Alcaligenes xylosoxidans Bact. Gram-neg inner 1 0 1.0 ± 1.0 43 ± 7 -4.3
2.2.05.01. Azurin iso-2 1cuo Methylomonas sp. Bact. Gram-neg inner 1 0 1.4 ± 1.6 69 ± 15 -4.3
1.1.09.01. Copper efflux ATPase 3rfu Legionella pneumophila Bact. Gram-neg inner 1 8 30.0 ± 0.4 16 ± 1 -72.1
2.2.07.01. Polyisoprenoid-binding protein 1wub Thermus thermophilus Bact. Gram-neg inner 1 0 2.9 ± 1.9 42 ± 13 -4.4
2.2.04.01. Lignostilbene-alpha,beta-dioxygenase (retinal-forming oxygenase) 2biw Synechocystis sp. Bact. Gram-neg inner 1 0 6.1 ± 0.9 39 ± 9 -12.9
1.1.26.06. Uracil transporter UraA 3qe7 Escherichia coli Bact. Gram-neg inner 1 14 27.7 ± 1.2 16 ± 0 -79.3
2.2.10.01. High potential iron protein 1hpi Ectothiorhodospira vacuolata Bact. Gram-neg inner 1 0 2.7 ± 1.0 89 ± 12 -4.4
1.1.28.02. Efflux transporter CusA, apo-protein 3k07 Escherichia coli Bact. Gram-neg inner 3 33 27.4 ± 1.2 0 ± 0 -166.7
1.1.28.02. Efflux transporter CusA, Cu(i) complex 3kss Escherichia coli Bact. Gram-neg inner 3 33 28.8 ± 0.5 0 ± 0 -147.7
2.3.15.01. Electron transfer flavoprotein 1efp Paracoccus denitrificans Bact. Gram-neg inner 2 0 4.3 ± 1.1 90 ± 13 -4.8
2.3.16.01. Shikimate kinase 1e6c Erwinia chrysanthemi Bact. Gram-neg inner 2 0 2.6 ± 1.8 90 ± 12 -5.8
2.3.16.01. Shikimate kinase 1via Campylobacter jejuni Bact. Gram-neg inner 2 0 3.9 ± 1.4 89 ± 11 -5.0
2.3.10.01. Peptidoglycan biosynthesis glycosyltransferase MurG, conformation 2 1f0k Escherichia coli Bact. Gram-neg inner 1 0 5.3 ± 1.2 55 ± 7 -8.6
1.1.08.01. ATP synthase subunit b, peptide 1-33 1b9u Escherichia coli Bact. Gram-neg inner 1 1 29.8 ± 4.0 41 ± 2 -23.1
2.3.10.01. Peptidoglycan biosynthesis glycosyltransferase MurG, conformation 1 1nlm Escherichia coli Bact. Gram-neg inner 1 0 4.8 ± 1.1 50 ± 7 -7.5
1.1.25.02. Lactose permease LacY, structure 1 2cfq Escherichia coli Bact. Gram-neg inner 1 12 31.9 ± 1.1 5 ± 1 -87.9
1.1.25.05. Di- or tripeptide transporter 4w6v Yersinia enterocolitica Bact. Gram-neg inner 1 14 29.8 ± 1.2 12 ± 1 -113.6
1.1.63.01. Type 1 signal peptidase, complex with lipopeptide inhibitor 1t7d Escherichia coli Bact. Gram-neg inner 1 0 3.9 ± 1.0 65 ± 11 -7.6
1.1.63.01. Type 1 signal peptidase, complex with inhibitor 1b12 Escherichia coli Bact. Gram-neg inner 1 0 5.4 ± 1.8 88 ± 7 -5.1
1.1.63.01. Type 1 signal peptidase, apo-enzyme 1kn9 Escherichia coli Bact. Gram-neg inner 1 0 3.4 ± 1.4 80 ± 6 -7.8
1.1.04.01. Respiratory complex I 3rko Escherichia coli Bact. Gram-neg inner 6 58 29.6 ± 0.0 9 ± 0 -236.7
2.3.05.02. Sulfide-quinone reductase 3sx6 Acidithiobacillus ferrooxidans Bact. Gram-neg inner 1 0 10.6 ± 0.6 70 ± 8 -7.3
3.1.02.11. Methyl-accepting chemotaxis protein II 2l9g Escherichia coli Bact. Gram-neg inner 1 0 8.1 ± 4.2 75 ± 0 -11.7
1.1.25.03. Multidrug transporter EmrD 2gfp Escherichia coli Bact. Gram-neg inner 1 12 31.6 ± 1.5 9 ± 0 -58.0
2.1.08.01. Cytochrome c2 1cxa Rhodobacter sphaeroides Bact. Gram-neg inner 1 0 2.0 ± 1.2 88 ± 13 -4.3
1.1.28.01. Multidrug efflux transporter AcrB, asymmetric 2gif Escherichia coli Bact. Gram-neg inner 3 36 29.0 ± 0.2 1 ± 0 -187.5
1.1.10.02. Maltose transporter MalFGK, outward conformation 3puw Escherichia coli Bact. Gram-neg inner 2 14 29.8 ± 1.3 3 ± 1 -94.0
1.1.60.01. Protease GlpG 2nr9 Haemophilus influenzae Bact. Gram-neg inner 1 6 28.2 ± 1.6 13 ± 3 -52.0
1.1.15.02. Proton-gated ion channel, inactive conformation 3 3rqw Erwinia chrysanthemi Bact. Gram-neg inner 5 20 29.8 ± 0.4 0 ± 0 -118.8
2.4.05.01. Sterol carrier protein 2 2cx7 Thermus thermophilus Bact. Gram-neg inner 1 0 4.7 ± 1.3 73 ± 13 -6.9
1.1.44.01. DsbB - DsbA complex, conformation 1 2hi7 Escherichia coli Bact. Gram-neg inner 1 4 24.3 ± 3.0 30 ± 0 -34.9
1.2.31.01. Cytochrome c nitrite reductase complex 2j7a Desulfovibrio vulgaris Bact. Gram-neg inner 2 2 31.8 ± 3.1 0 ± 2 -42.9
1.1.10.01. ABC transporter permease HI1471 2nq2 Haemophilus influenzae Bact. Gram-neg inner 2 20 31.9 ± 0.9 1 ± 1 -124.2
1.1.41.01. Magnesium ion transporter-E (MgtE), structure 1 2yvx Thermus thermophilus Bact. Gram-neg inner 2 10 31.1 ± 0.9 0 ± 0 -69.2
1.1.27.01. Ferrous-iron efflux pump fieF, different conformation 2qfi Escherichia coli Bact. Gram-neg inner 2 12 25.0 ± 1.3 1 ± 2 -32.4
1.1.10.03. Lipid flippase MsbA, open state 3b60 Salmonella enterica Bact. Gram-neg inner 2 12 31.8 ± 0.9 0 ± 0 -98.5
1.1.28.01. Multidrug efflux transporter AcrB, asymmetric, complex with ankyrin repeat 1 4dx5 Escherichia coli Bact. Gram-neg inner 3 36 27.4 ± 0.7 1 ± 0 -181.0
1.1.12.04. Bacterial cyclic nucleotide regulated ion channel 3beh Rhizobium loti Bact. Gram-neg inner 4 24 30.6 ± 0.8 0 ± 0 -205.7
1.1.15.02. Proton-gated ion channel, inactive conformation 1 2vl0 Erwinia chrysanthemi Bact. Gram-neg inner 5 20 31.8 ± 1.3 0 ± 0 -107.6
1.1.50.01. Particulate methane monooxygenase 3chx Methylosinus trichosporium Bact. Gram-neg inner 10 30 29.8 ± 0.4 0 ± 0 -152.0
1.1.19.01. Mechanosensitive channel protein MscS, open state 5aji Escherichia coli Bact. Gram-neg inner 7 21 29.8 ± 1.7 0 ± 0 -127.8
1.1.25.02. Lactose permease LacY, structure 5 4oaa Escherichia coli Bact. Gram-neg inner 1 12 32.6 ± 1.6 2 ± 2 -101.7
1.1.11.01. Protein translocase SecY, complex with SecA 3din Thermotoga maritima Bact. Gram-neg inner 3 13 26.9 ± 0.1 5 ± 0 -63.3
1.1.44.01. Disulfide bond formation protein B, conformation 1 2k74 Escherichia coli Bact. Gram-neg inner 1 4 29.7 ± 2.4 26 ± 1 -50.2
1.1.11.01. Protein translocase SecY, pre-open state 2zjs Thermus thermophilus Bact. Gram-neg inner 2 11 30.7 ± 1.2 7 ± 0 -100.7
1.1.01.01. Xanthorhodopsin 3ddl Salinibacter ruber Bact. Gram-neg inner 1 7 28.2 ± 1.8 11 ± 0 -60.7
1.1.15.02. Proton-gated ion channel, open state 3eam Gloeobacter violaceus Bact. Gram-neg inner 5 20 32.7 ± 0.9 0 ± 1 -183.4
1.1.12.18. TrkH/TrkA potassium transport complex 4j9u Vibrio parahaemolyticus Bact. Gram-neg inner 2 20 29.4 ± 0.7 0 ± 0 -151.9
1.1.26.03. Sodium/sugar symporter vSGLT, substrate-bound 3dh4 Vibrio parahaemolyticus Bact. Gram-neg inner 2 30 30.0 ± 0.7 0 ± 0 -184.0
1.1.10.01. ABC transporter BtuCD, complex with BtuF, structure 1 2qi9 Escherichia coli Bact. Gram-neg inner 2 22 29.4 ± 0.9 4 ± 4 -123.5
1.1.10.02. Methionine importer MetNI, conformation 1 3tui Escherichia coli Bact. Gram-neg inner 2 10 30.2 ± 1.3 1 ± 1 -81.0
1.1.12.13. Kir3.1-prokaryotic Kir channel chimera 2qks Burkholderia xenovorans Bact. Gram-neg inner 4 8 30.5 ± 1.4 0 ± 1 -88.6
1.1.28.01. Multidrug efflux transporter AcrB with YajC subunit , symmetric 2rdd Escherichia coli Bact. Gram-neg inner 6 39 28.4 ± 0.5 0 ± 0 -156.2
1.1.44.01. DsbB - DsbA complex, conformation 2 2zup Escherichia coli Bact. Gram-neg inner 1 4 24.2 ± 2.9 3 ± 8 -18.3
1.1.44.01. Disulfide bond formation protein B, conformation 3 2zuq Escherichia coli Bact. Gram-neg inner 1 4 27.9 ± 3.1 27 ± 1 -36.6
2.3.05.03. Glycerol-3-phosphate dehydrogenase (GlpD) 2qcu Escherichia coli Bact. Gram-neg inner 1 0 4.5 ± 1.5 74 ± 11 -8.4
2.3.14.02. Uncharacterized protein 2q3l Shewanella loihica Bact. Gram-neg inner 1 0 6.0 ± 0.5 64 ± 4 -12.6
1.1.28.01. Multidrug exporter MexB 2v50 Pseudomonas aeruginosa Bact. Gram-neg inner 3 36 28.6 ± 1.0 0 ± 1 -167.3
1.2.38.01. Penicillin-binding protein 1A 2oqo Aquifex aeolicus Bact. Gram-neg inner 1 0 3.0 ± 1.0 40 ± 6 -11.0
1.2.38.01. Penicillin-binding protein 1B 5hlb Escherichia coli Bact. Gram-neg inner 1 1 30.0 ± 2.0 33 ± 1 -21.7
1.1.26.05. Arginine/agmatine antiporter (AdiC), outward-facing structure 1 3h5m Escherichia coli Bact. Gram-neg inner 2 26 29.0 ± 0.8 0 ± 0 -128.9
2.3.05.02. Sulfide-quinone reductase 3h28 Aquifex aeolicus Bact. Gram-neg inner 3 0 2.4 ± 0.1 90 ± 0 -19.4
1.1.49.01. ATP-dependent zinc metalloprotease FtsH 3kds Thermotoga maritima Bact. Gram-neg inner 6 0 2.2 ± 0.4 90 ± 0 -12.8
1.1.54.01. Diacylglycerol kinase (DAGK), NMR model 2kdc Escherichia coli Bact. Gram-neg inner 3 9 25.5 ± 1.8 0 ± 0 -39.9
1.1.26.05. Arginine/agmatine antiporter (AdiC), outward-facing conformation 3hqk Salmonella enterica Bact. Gram-neg inner 2 26 29.8 ± 1.0 0 ± 0 -124.6
2.3.10.02. Beta-1,2-glucuronosyltrnansferase GumK 2q6v Xanthomonas campestris Bact. Gram-neg inner 1 0 5.2 ± 1.0 61 ± 8 -9.5
2.3.10.03. Heptosyltransferase WaaC 2h1h Escherichia coli Bact. Gram-neg inner 1 0 5.0 ± 1.1 67 ± 5 -9.1
2.3.10.03. LPS heptosyltransferase II, WaaF 1psw Escherichia coli Bact. Gram-neg inner 1 0 3.1 ± 1.1 58 ± 8 -5.6
1.1.30.01. Membrane protein insertase YidC, periplasmic domain 3blc Escherichia coli Bact. Gram-neg inner 1 0 6.6 ± 0.5 40 ± 11 -7.0
2.1.31.01. Colicin-M 3da4 Escherichia coli Bact. Gram-neg inner 1 0 2.5 ± 0.9 49 ± 11 -5.5
1.1.17.01. Rh-like protein 3b9y Nitrosomonas europaea Bact. Gram-neg inner 3 33 29.8 ± 1.3 0 ± 0 -150.1
1.1.27.01. Ferrous-iron efflux pump fieF 3h90 Escherichia coli Bact. Gram-neg inner 2 12 29.6 ± 0.8 0 ± 2 -83.9
2.3.20.01. Hydrophilic domain of respiratory complex I 3i9v Thermus thermophilus Bact. Gram-neg inner 8 0 5.1 ± 1.4 34 ± 10 -11.6
1.1.02.01. Photosynthetic reaction center 2j8c Rhodobacter sphaeroides Bact. Gram-neg inner 3 11 31.8 ± 0.8 2 ± 0 -129.6
2.3.16.04. Dynamin-like protein 2j69 Nostoc punctiforme Bact. Gram-neg inner 1 0 4.0 ± 7.0 15 ± 10 -5.5
1.1.14.02. Formate transporter 1, FocA 3kly Vibrio cholerae Bact. Gram-neg inner 5 35 31.4 ± 0.5 1 ± 0 -188.2
1.1.14.02. Formate transporter 1, FocA 3kcu Escherichia coli Bact. Gram-neg inner 5 35 29.9 ± 0.7 0 ± 0 -160.9
1.1.17.02. Urea transporter 3k3f Desulfovibrio vulgaris Bact. Gram-neg inner 3 30 29.4 ± 0.8 0 ± 0 -124.4
1.1.10.02. Maltose transporter MalFGK, inward conformation, TMH 1 deleted 3fh6 Escherichia coli Bact. Gram-neg inner 2 13 29.9 ± 0.6 3 ± 1 -97.8
1.1.17.01. Ammonia channel, complex with inhibitory GlnK 2ns1 Escherichia coli Bact. Gram-neg inner 3 33 29.1 ± 0.7 0 ± 0 -148.7
1.1.06.01. Cytochrome bc1, bacterial 1zrt Rhodobacter capsulatus Bact. Gram-neg inner 6 20 29.9 ± 0.9 0 ± 0 -178.6
1.1.51.01. Vitamin K epoxide reductase, conformation 1 4nv6 Synechococcus sp. Bact. Gram-neg inner 1 5 29.8 ± 1.8 1 ± 1 -54.2
1.1.14.01. Aquaporin Z2 3llq Agrobacterium tumefaciens Bact. Gram-neg inner 4 32 29.8 ± 0.6 0 ± 0 -134.5
1.1.47.01. Sensor protein kdpD 2ksf Escherichia coli Bact. Gram-neg inner 1 4 26.2 ± 4.0 45 ± 1 -27.9
1.1.47.01. Aerobic respiration control sensor protein acrB 2ksd Escherichia coli Bact. Gram-neg inner 1 2 27.9 ± 2.8 9 ± 1 -33.6
1.1.47.01. Sensor protein qseC 2kse Escherichia coli Bact. Gram-neg inner 1 2 31.3 ± 2.5 19 ± 0 -35.7
1.1.26.04. L-carnitine/gamma-butyrobetaine antiporter CaiT, substrate-bound 3hfx Escherichia coli Bact. Gram-neg inner 3 42 29.8 ± 0.8 0 ± 0 -203.5
1.1.90.01. Phosphatidate cytidylyltransferase, conformation 1 4q2e Thermotoga maritima Bact. Gram-neg inner 2 18 29.8 ± 0.6 1 ± 0 -77.7
1.1.12.13. Potassium channel Kirbac1.1, closed state, refined 2wll Burkholderia pseudomallei Bact. Gram-neg inner 4 8 33.4 ± 2.4 0 ± 0 -109.1
1.1.12.13. Potassium channel Kirbac3.1, closed conformation 2wlk Magnetospirillum magnetotacticum Bact. Gram-neg inner 4 8 29.8 ± 2.4 0 ± 0 -78.7
1.1.31.01. Tellurite resistance protein tehA homolog 3m73 Haemophilus influenzae Bact. Gram-neg inner 3 30 29.1 ± 1.4 0 ± 0 -157.4
1.1.46.01. MerF bacterial mercury uptake transporter, structure 1 2lj2 Morganella morganii Bact. Gram-neg inner 1 2 28.8 ± 2.4 19 ± 1 -37.9
1.1.02.01. Photosynthetic reaction center, more complete structure 2j8d Rhodobacter sphaeroides Bact. Gram-neg inner 3 11 31.6 ± 1.0 5 ± 0 -135.5
1.1.07.01. Bacterial cytochrome c oxidase, cbb3 type 3mk7 Pseudomonas stutzeri Bact. Gram-neg inner 4 17 32.8 ± 1.2 4 ± 4 -119.2
1.1.25.04. L-fucose-proton symporter fucP 3o7q Escherichia coli Bact. Gram-neg inner 1 12 30.7 ± 1.3 6 ± 0 -85.3
1.1.26.04. L-carnitine/gamma-butyrobetaine antiporter CaiT, open inward-facing conformation 2wsx Escherichia coli Bact. Gram-neg inner 3 42 28.6 ± 0.7 7 ± 0 -212.7
1.1.26.04. L-carnitine/gamma-butyrobetaine antiporter CaiT, open inward-facing conformation 2wsw Proteus mirabilis Bact. Gram-neg inner 3 42 29.8 ± 0.5 0 ± 0 -218.9
1.1.60.01. Protease GlpG, complex with inhibitor, conformation 1 2xow Escherichia coli Bact. Gram-neg inner 1 6 29.0 ± 1.7 15 ± 2 -59.0
1.1.38.01. Na+/drug antiporter NorM, outward-open 3mkt Vibrio cholerae Bact. Gram-neg inner 1 12 29.8 ± 1.1 9 ± 0 -74.0
1.1.36.01. ClC chloride transporter 3nd0 Synechocystis sp. Bact. Gram-neg inner 2 28 29.8 ± 0.7 0 ± 1 -120.9
1.1.26.03. Sodium/sugar symporter vSGLT, substrate-free 2xq2 Vibrio parahaemolyticus Bact. Gram-neg inner 2 30 30.4 ± 0.6 0 ± 0 -162.7
1.1.07.01. Nitric oxide reductase 3o0r Pseudomonas aeruginosa Bact. Gram-neg inner 2 13 31.7 ± 1.6 5 ± 0 -107.7
1.1.25.05. Glutathione uptake transporter, structure 1 2xut Shewanella oneidensis Bact. Gram-neg inner 1 14 30.9 ± 1.4 10 ± 0 -102.5
1.1.26.05. Arginine/agmatine transporter (AdiC), intermediate conformation 3ob6 Escherichia coli Bact. Gram-neg inner 2 24 29.8 ± 1.4 3 ± 1 -158.7
1.1.12.18. Potassium uptake protein TrkH 3pjz Vibrio parahaemolyticus Bact. Gram-neg inner 2 20 29.7 ± 0.6 1 ± 0 -164.0
1.1.02.05. Light-harvesting complex LH1, alpha chain 1xrd Rhodospirillum rubrum Bact. Gram-neg inner 1 1 30.3 ± 3.1 30 ± 4 -30.5
1.1.28.02. Efflux transporter CusA, complex with CusB 3ne5 Escherichia coli Bact. Gram-neg inner 3 36 29.0 ± 0.7 0 ± 0 -165.0
3.1.03.03. Membrane-bound helix of phosphotransferase IIA component 1o53 Escherichia coli Bact. Gram-neg inner 1 0 3.3 ± 1.3 86 ± 15 -7.8
2.3.06.05. Carboxylesterase 2 1auo Pseudomonas fluorescens Bact. Gram-neg inner 1 0 1.7 ± 3.0 33 ± 21 -3.4
2.3.06.05. Carboxylesterase 3cn9 Pseudomonas aeruginosa Bact. Gram-neg inner 1 0 3.5 ± 2.1 11 ± 32 -4.1
2.3.06.05. Thermostable Esterase 3doh Thermotoga maritima Bact. Gram-neg inner 1 0 4.0 ± 2.0 84 ± 13 -4.4
2.3.06.04. Acyl transferase LuxD 1tht Vibrio harveyi Bact. Gram-neg inner 1 0 3.3 ± 1.3 85 ± 4 -6.1
1.2.12.01. Fimbrial protein, type IV pilin, assembly 2hil Neisseria gonorrhoeae Bact. Gram-neg inner 18 1 29.6 ± 3.0 13 ± 1 -15.9
1.2.12.01. Fimbrial protein, monomer 1oqw Pseudomonas aeruginosa Bact. Gram-neg inner 1 1 29.8 ± 3.0 31 ± 8 -28.9
1.1.11.01. Ribosome-SecYE complex, structure 1 4v6m Escherichia coli Bact. Gram-neg inner 3 14 29.0 ± 0.8 14 ± 0 -100.9
1.1.14.02. Formate transporter 3q7k Salmonella enterica Bact. Gram-neg inner 5 30 28.6 ± 0.0 0 ± 0 -148.8
1.1.60.01. Protease GlpG, conformation 1 2xtv Escherichia coli Bact. Gram-neg inner 1 6 28.8 ± 1.6 14 ± 1 -61.1
1.1.28.03. SecDF secretion protein 3aqp Thermus thermophilus Bact. Gram-neg inner 1 12 29.8 ± 0.9 5 ± 1 -93.8
1.1.10.02. Maltose transporter MalFGK, a pre-translocation state 3puz Escherichia coli Bact. Gram-neg inner 2 14 29.0 ± 0.8 7 ± 0 -107.2
1.1.06.01. Cytochrome bc1, bacterial, structure 1 2qjy Rhodobacter sphaeroides Bact. Gram-neg inner 6 20 30.2 ± 0.6 0 ± 0 -188.6
1.1.25.02. Lactose permease LacY, structure 2 2v8n Escherichia coli Bact. Gram-neg inner 1 12 31.8 ± 0.8 5 ± 0 -86.4
1.1.52.01. Oligosaccharyltransferase PglB 3rce Campylobacter lari Bact. Gram-neg inner 1 13 28.8 ± 0.9 8 ± 0 -89.6
1.1.12.09. Voltage-gated sodium channel Nav1.7- NavAb, structure 1 3rvy Arcobacter butzleri Bact. Gram-neg inner 4 24 29.6 ± 0.4 0 ± 0 -216.9
1.1.33.01. Bile acid sodium symporter ASBT, inward-open conformation 3zuy Neisseria meningitidis Bact. Gram-neg inner 1 10 29.8 ± 1.5 15 ± 2 -82.3
1.2.13.01. Intrinsic membrane protein PufX 2ita Rhodobacter sphaeroides Bact. Gram-neg inner 1 1 32.2 ± 5.1 33 ± 1 -22.8
1.1.02.05. Light-harvesting protein B-870, beta chain 1wrg Rhodospirillum rubrum Bact. Gram-neg inner 1 1 27.0 ± 4.7 44 ± 1 -23.9
1.1.02.05. Light-harvesting protein B-875, beta chain 1jo5 Rhodobacter sphaeroides Bact. Gram-neg inner 1 1 29.6 ± 1.5 20 ± 2 -24.7
1.1.06.01. Cytochrome bc1, bacterial 2yiu Paracoccus denitrificans Bact. Gram-neg inner 6 20 29.8 ± 0.5 0 ± 0 -188.8
1.1.44.01. DsbB-DsbA complex, conformation 3 2leg Escherichia coli Bact. Gram-neg inner 1 4 30.6 ± 1.7 34 ± 2 -36.3
1.1.01.01. Green-light absorbing proteorhodopsin 2l6x Gamma-proteobacterium Bact. Gram-neg inner 1 7 27.8 ± 1.3 18 ± 1 -55.2
1.1.48.01. Putative sulfate permease CysZ 3tx3 Idiomarina loihiensis Bact. Gram-neg inner 1 6 29.8 ± 0.6 17 ± 4 -49.5
2.3.13.03. Thiol-disulfide interchange protein DsbA 1u3a Escherichia coli Bact. Gram-neg inner 1 0 2.2 ± 1.4 86 ± 8 -4.2
2.4.06.01. STAR-related lipid transfer protein from bacteria 3qsz Xanthomonas axonopodis Bact. Gram-neg inner 1 0 3.7 ± 1.4 58 ± 15 -3.0
1.1.10.02. Methionine importer MetNI, conformation 2 3tuj Escherichia coli Bact. Gram-neg inner 2 10 30.4 ± 1.3 7 ± 1 -84.5
3.1.02.03. Juxtamembrane helix of ATP synthase subunit b 2khk Escherichia coli Bact. Gram-neg inner 1 0 1.9 ± 0.1 85 ± 3 -3.9
1.1.26.01. Leucine transporter LeuT, inward-facing conformation 3tt3 Aquifex aeolicus Bact. Gram-neg inner 1 12 27.4 ± 1.6 9 ± 0 -89.1
1.1.12.13. Potassium channel Kirbac3.1, open conformation 3zrs Magnetospirillum magnetotacticum Bact. Gram-neg inner 4 8 30.0 ± 1.1 0 ± 0 -85.9
1.2.32.01. Cytochrome P450 1n97 Thermus thermophilus Bact. Gram-neg inner 1 0 5.2 ± 0.3 43 ± 5 -9.9
2.4.06.04. STAR-related bacterial protein 2d4r Thermus thermophilus Bact. Gram-neg inner 1 0 6.9 ± 2.2 28 ± 6 -7.1
2.3.04.01. Sorbitol dehydrogenase 1k2w Rhodobacter sphaeroides Bact. Gram-neg inner 2 0 2.2 ± 0.3 89 ± 1 -4.4
2.1.07.01. Nonaheme cytochrome c 1duw Desulfovibrio desulfuricans Bact. Gram-neg inner 1 0 5.1 ± 0.4 87 ± 10 -4.9
1.1.63.01. Signal peptidase I 3iiq Escherichia coli Bact. Gram-neg inner 2 0 4.3 ± 0.5 57 ± 2 -10.2
1.2.12.01. Fimbrial protein 3sok Dichelobacter nodosus (Bacteroides nodosus) Bact. Gram-neg inner 1 1 29.8 ± 3.9 18 ± 5 -25.0
2.2.05.01. Azurin 1xb8 Pseudomonas aeruginosa Bact. Gram-neg inner 1 0 2.7 ± 0.6 47 ± 4 -5.2
2.4.20.02. Arylamine N-acetyltransferase 1w4t Pseudomonas aeruginosa Bact. Gram-neg inner 1 0 2.8 ± 0.4 82 ± 1 -5.8
2.1.08.01. Cytochrome c peroxidase 1nml Marinobacter hydrocarbonoclasticus Bact. Gram-neg inner 1 0 2.2 ± 0.4 83 ± 0 -7.9
1.1.49.01. ATP-dependent zinc metalloprotease FtsH 1lv7 Escherichia coli Bact. Gram-neg inner 1 0 2.1 ± 1.0 80 ± 11 -4.3
2.3.16.09. GTP-binding protein YjiA 1nij Escherichia coli Bact. Gram-neg inner 1 0 3.4 ± 0.1 41 ± 1 -6.7
2.3.31.01. Sorbose-specific phosphotransferase enzyme IIB component 1nrz Klebsiella pneumoniae Bact. Gram-neg inner 1 0 2.1 ± 0.7 83 ± 3 -4.5
2.2.25.01. Superoxide dismutase [Cu-Zn] 1oal Photobacterium leiognathi Bact. Gram-neg inner 1 0 2.4 ± 0.9 77 ± 2 -6.8
2.3.32.01. UDP-N-acetylmuramate--L-alanine ligase 1p31 Haemophilus influenzae Bact. Gram-neg inner 1 0 4.4 ± 1.8 29 ± 14 -4.6
2.1.50.01. Phosphate transport system protein phoU homolog 2 1sum Thermotoga maritima Bact. Gram-neg inner 1 0 4.9 ± 2.1 68 ± 4 -4.3
2.2.12.05. Glucans biosynthesis protein G 1txk Escherichia coli Bact. Gram-neg inner 1 0 2.3 ± 0.7 80 ± 8 -5.1
2.4.40.01. IpgB2 protein 3lxr Shigella flexneri Bact. Gram-neg inner 2 0 2.7 ± 0.4 75 ± 2 -6.7
2.3.29.01. Undecaprenyl pyrophosphate synthase 2d2r Helicobacter pylori Bact. Gram-neg inner 2 0 1.3 ± 0.9 78 ± 1 -4.5
1.1.25.02. Lactose permease LacY, structure 6 5gxb Escherichia coli Bact. Gram-neg inner 1 12 33.8 ± 1.5 1 ± 1 -89.6
1.1.15.02. Proton-gated ion channel, inactive conformation 5 5lg3 Erwinia chrysanthemi Bact. Gram-neg inner 5 20 33.8 ± 1.1 0 ± 0 -108.7
1.1.55.01. Bacterial polysaccharide co-polymerase FepE 3b8n Escherichia coli Bact. Gram-neg inner 9 0 1.6 ± 0.1 1 ± 0 -20.3
1.1.62.01. Diguanylate cyclase/phosphodiesterase 3pjv Pseudomonas fluorescens Bact. Gram-neg inner 5 0 4.6 ± 1.5 79 ± 4 -6.6
1.1.24.01. Bestrophin ion channel 4wd8 Klebsiella pneumoniae Bact. Gram-neg inner 5 20 27.4 ± 0.6 0 ± 0 -119.7
2.2.07.01. Acidic stress response factor 3hpe Helicobacter pylori Bact. Gram-neg inner 1 0 3.0 ± 0.7 34 ± 8 -6.1
2.2.07.01. Protein yceI 1y0g Escherichia coli Bact. Gram-neg inner 1 0 4.2 ± 1.5 24 ± 16 -2.1
2.2.07.01. YceI-like protein 3q34 Pseudomonas syringae Bact. Gram-neg inner 2 0 1.0 ± 1.1 89 ± 2 -3.9
1.1.65.01. Concentrative nucleoside transporter 3tij Vibrio cholerae Bact. Gram-neg inner 3 27 27.0 ± 0.5 0 ± 0 -155.2
1.1.26.05. Glutamate/gamma-aminobutyrate antiporter 4dji Escherichia coli Bact. Gram-neg inner 1 12 30.0 ± 1.1 10 ± 1 -98.9
1.1.10.03. ABC transporter, inward-facing conformation 3qf4 Thermotoga maritima Bact. Gram-neg inner 2 12 32.0 ± 0.8 2 ± 0 -104.9
1.1.15.02. Proton-gated ion channel, inactive conformation 2 3uq7 Erwinia chrysanthemi Bact. Gram-neg inner 5 20 32.0 ± 1.6 0 ± 1 -92.6
1.1.12.11. NaK-NavSulP chimera channel 3vou Sulfitobacter sp. Bact. Gram-neg inner 4 8 30.4 ± 0.8 0 ± 0 -100.1
1.1.07.01. Bacterial cytochrome c oxidase, caa3-type 2yev Thermus thermophilus Bact. Gram-neg inner 3 21 31.2 ± 0.8 6 ± 0 -146.1
1.1.28.02. Efflux transporter CusA, complex with CusB, pre-extrusion state 3t56 Escherichia coli Bact. Gram-neg inner 3 36 30.4 ± 0.6 0 ± 0 -153.7
1.1.07.01. Bacterial cytochrome c oxidase 3s8g Thermus thermophilus Bact. Gram-neg inner 3 15 31.2 ± 1.1 7 ± 0 -112.3
1.1.26.01. Leucine transporter LeuT, outward-facing conformation, from bicelles 4fxz Aquifex aeolicus Bact. Gram-neg inner 2 24 28.0 ± 0.6 0 ± 0 -144.3
1.1.66.01. K(+)-pumping pyrophosphatase, structure 1 4av3 Thermotoga maritima Bact. Gram-neg inner 2 32 29.8 ± 0.7 0 ± 0 -182.5
2.3.16.10. Tetraacyldisaccharide 4-kinase 4ehx Aquifex aeolicus Bact. Gram-neg inner 1 0 8.0 ± 1.1 69 ± 3 -13.9
2.3.16.10. Tetraacyldisaccharide 4-kinase, complex with ADP/ATP 4ehy Aquifex aeolicus Bact. Gram-neg inner 1 0 7.9 ± 0.9 71 ± 4 -12.1
1.1.10.01. ABC transporter BtuCD, nucleotide-bound state 4fi3 Escherichia coli Bact. Gram-neg inner 2 20 29.0 ± 1.0 0 ± 0 -118.3
2.3.10.01. Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase 3s2u Pseudomonas aeruginosa Bact. Gram-neg inner 1 0 6.8 ± 0.9 60 ± 2 -8.3
1.1.12.09. Sodium channel NavMs, open state 1 4f4l Magnetococcus marinus Bact. Gram-neg inner 4 8 28.2 ± 1.3 1 ± 0 -74.6
1.1.27.01. Zinc transporter YiiP, inward-facing conformation 3j1z Shewanella oneidensis Bact. Gram-neg inner 2 12 28.6 ± 1.2 8 ± 1 -54.4
1.1.25.06. D-xylose-proton symporter xylE, conformation 1 4gc0 Escherichia coli Bact. Gram-neg inner 1 12 30.2 ± 0.9 1 ± 0 -90.2
1.1.15.02. Proton-gated ion channel, inactive conformation 4 4a97 Erwinia chrysanthemi Bact. Gram-neg inner 5 40 31.8 ± 0.5 0 ± 0 -125.8
1.1.72.01. Dicarboxylate/sodium symporter NadC 5uld Vibrio cholerae Bact. Gram-neg inner 2 28 30.2 ± 0.6 0 ± 1 -106.9
1.1.10.09. MacAB-TolC efflux pump 5nik Escherichia coli Bact. Gram-neg inner 2 8 34.6 ± 2.0 0 ± 0 -96.2
1.1.21.01. CorA magnesium transporter, structure 2 4eeb Thermotoga maritima Bact. Gram-neg inner 5 10 30.0 ± 1.0 1 ± 1 -81.6
1.1.14.02. Nitrite transporter NirC 4fc4 Salmonella typhimurium Bact. Gram-neg inner 5 35 33.8 ± 0.0 0 ± 0 -112.5
1.1.75.01. Sec-independent protein translocase TatC 4b4a Aquifex aeolicus Bact. Gram-neg inner 1 6 30.4 ± 1.2 17 ± 0 -51.7
1.1.10.01. Hemin transport system permease, HmuU 4g1u Yersinia pestis Bact. Gram-neg inner 2 20 29.8 ± 0.5 0 ± 0 -114.3
1.1.76.01. Acid-activated urea channel 3ux4 Helicobacter pylori Bact. Gram-neg inner 6 36 30.0 ± 0.5 0 ± 0 -190.2
1.1.77.01. Cellulose synthase, structure 1 4hg6 Rhodobacter sphaeroides Bact. Gram-neg inner 2 9 30.0 ± 1.3 17 ± 0 -85.0
1.1.12.18. Multi-ligand gated K(+) channel, TrkA, mutant 4gx0 Geobacter sulfurreducens Bact. Gram-neg inner 4 8 31.8 ± 1.3 0 ± 0 -109.5
1.1.12.18. Multi-ligand gated K(+) channel, TrkA 4gx5 Geobacter sulfurreducens Bact. Gram-neg inner 4 8 31.6 ± 0.7 0 ± 0 -94.6
1.1.05.06. Ni/Fe-hydrogenase complex 4gd3 Escherichia coli Bact. Gram-neg inner 3 6 27.2 ± 1.4 9 ± 1 -42.4
1.1.38.01. Na+/drug antiporter NorM, outward-open, structure 1 4hum Neisseria gonorrhoeae Bact. Gram-neg inner 1 12 28.6 ± 1.1 5 ± 1 -54.5
1.1.19.01. Mechanosensitive channel protein MscS, closed state 4hw9 Helicobacter pylori Bact. Gram-neg inner 7 14 31.6 ± 1.8 0 ± 0 -140.9
1.1.60.01. Protease GlpG, complex with inhibitor, conformation 2 3zeb Escherichia coli Bact. Gram-neg inner 1 6 28.4 ± 1.3 12 ± 0 -64.0
1.1.04.01. Respiratory complex I 4hea Thermus thermophilus Bact. Gram-neg inner 7 67 29.8 ± 0.5 10 ± 0 -299.7
1.1.44.01. Disulfide bond formation protein B, conformation 2 2ltq Escherichia coli Bact. Gram-neg inner 1 4 28.4 ± 1.5 26 ± 0 -36.5
1.1.21.01. CorA magnesium transporter, complete loops, structure 1 4i0u Thermotoga maritima Bact. Gram-neg inner 5 10 30.4 ± 1.1 0 ± 0 -83.4
1.1.05.01. Polysulfide reductase, substrate-bound state 2vpx Thermus thermophilus Bact. Gram-neg inner 2 16 27.1 ± 1.1 0 ± 1 -103.3
1.1.11.01. Protein translocase SecY, closed state 2zqp Thermus thermophilus Bact. Gram-neg inner 2 11 29.8 ± 0.4 9 ± 0 -99.4
1.1.10.01. ABC transporter BtuCD, complex with BtuF, structure 2 4dbl Escherichia coli Bact. Gram-neg inner 2 20 29.4 ± 1.0 4 ± 0 -123.4
1.1.10.02. Methionine importer MetNI, conformation 3 3dhw Escherichia coli Bact. Gram-neg inner 2 10 29.2 ± 1.0 1 ± 0 -82.5
1.1.28.01. Multidrug efflux transporter AcrB, symmetric 3d9b Escherichia coli Bact. Gram-neg inner 3 36 28.4 ± 0.6 0 ± 0 -189.9
1.1.28.01. Multidrug efflux transporter AcrB, asymmetric, complex with ankyrin repeat 2 3nog Escherichia coli Bact. Gram-neg inner 3 36 29.0 ± 0.5 3 ± 0 -202.9
1.1.25.02. Lactose permease LacY, structure 3 1pv6 Escherichia coli Bact. Gram-neg inner 1 12 31.8 ± 1.2 5 ± 0 -89.1
1.1.25.02. Lactose permease LacY, structure 4 2y5y Escherichia coli Bact. Gram-neg inner 1 12 31.8 ± 1.3 4 ± 1 -89.0
1.1.26.01. Leucine transporter LeuT, outward-facing substrate-free conformation 3tt1 Aquifex aeolicus Bact. Gram-neg inner 2 24 28.2 ± 1.2 0 ± 0 -160.8
1.1.12.04. Bacterial cyclic nucleotide regulated ion channel, different conformation 2zd9 Rhizobium loti Bact. Gram-neg inner 4 24 31.6 ± 1.2 0 ± 0 -192.8
1.1.12.09. Voltage-gated sodium channel NavAb, structure 2 4ekw Arcobacter butzleri Bact. Gram-neg inner 4 24 29.4 ± 0.5 0 ± 0 -201.0
1.1.15.02. Proton-gated ion channel, conformation 1 3tlw Gloeobacter violaceus Bact. Gram-neg inner 5 20 34.0 ± 1.6 0 ± 0 -190.3
1.1.21.01. CorA magnesium transporter, structure 3 2iub Thermotoga maritima Bact. Gram-neg inner 5 10 28.0 ± 1.2 0 ± 0 -65.7
1.1.35.01. Sodium/proton antiporter 1 (NhaA), dimer 3fi1 Escherichia coli Bact. Gram-neg inner 2 24 28.4 ± 1.6 2 ± 1 -126.7
1.1.44.01. DsbB - DsbA complex, conformation 4 3e9j Escherichia coli Bact. Gram-neg inner 1 4 26.8 ± 1.5 31 ± 1 -27.1
1.1.50.01. Particulate methane monooxygenase, different structure 3rgb Methylococcus capsulatus Bact. Gram-neg inner 9 39 28.2 ± 0.6 0 ± 0 -204.9
1.1.60.01. Protease GlpG, complex with inhibitor, conformation 3 3ubb Escherichia coli Bact. Gram-neg inner 1 6 29.8 ± 1.3 21 ± 1 -65.3
1.1.60.01. Protease GlpG, conformation 2 2nrf Escherichia coli Bact. Gram-neg inner 1 6 27.6 ± 1.5 13 ± 2 -45.9
1.1.60.01. Protease GlpG, conformation 3 2irv Escherichia coli Bact. Gram-neg inner 1 6 28.2 ± 1.3 23 ± 5 -48.1
1.1.66.01. K(+)-pumping pyrophosphatase, structure 2 4av6 Thermotoga maritima Bact. Gram-neg inner 2 32 29.8 ± 0.8 0 ± 0 -173.1
1.1.75.02. Sec-independent protein translocase TatA 2lzr Escherichia coli Bact. Gram-neg inner 1 1 29.2 ± 1.8 26 ± 2 -29.1
1.1.75.02. Sec-independent protein translocase TatA, nonamer model 2lzs Escherichia coli Bact. Gram-neg inner 9 9 29.2 ± 1.8 26 ± 2 -29.1
1.1.10.03. Lipid flippase MsbA, closed state 3b5x Vibrio cholerae Bact. Gram-neg inner 2 12 30.2 ± 1.0 0 ± 0 -58.7
1.2.33.02. Protoporphyrinogen oxidase 2ivd Myxococcus xanthus Bact. Gram-neg inner 1 0 3.7 ± 0.2 29 ± 2 -8.0
1.1.25.07. Nitrite exporter NarU 4iu9 Escherichia coli Bact. Gram-neg inner 1 12 31.0 ± 1.2 4 ± 0 -88.1
1.1.25.06. D-xylose-proton symporter xylE, conformation 2 4ja3 Escherichia coli Bact. Gram-neg inner 1 12 29.8 ± 1.0 4 ± 1 -87.6
1.1.25.06. D-xylose-proton symporter xylE, conformation 3 4ja4 Escherichia coli Bact. Gram-neg inner 1 12 28.2 ± 1.3 0 ± 0 -82.8
1.1.60.01. Protease GlpG, crystallographic trimer 4h1d Escherichia coli Bact. Gram-neg inner 3 18 27.0 ± 0.1 2 ± 0 -108.7
1.1.01.01. Blue-light absorbing proteorhodopsin 4knf Gamma-proteobacterium Bact. Gram-neg inner 5 35 28.4 ± 1.5 1 ± 1 -159.6
1.1.01.01. Proteorhodopsin 4jq6 Gamma-proteobacterium Bact. Gram-neg inner 6 42 28.4 ± 1.3 0 ± 0 -188.5
1.1.25.07. Nitrate/nitrite exchanger NarK, partially occluded state 4jr9 Escherichia coli Bact. Gram-neg inner 1 12 29.6 ± 1.0 8 ± 0 -86.2
1.1.08.01. F1F0 ATP synthase, F0 complex 3zk1 Fusobacterium nucleatum Bact. Gram-neg inner 11 22 36.6 ± 2.3 0 ± 0 -84.3
1.1.54.01. Diacylglycerol kinase (DAGK), conformation 1 3ze5 Escherichia coli Bact. Gram-neg inner 3 9 29.8 ± 0.9 2 ± 1 -72.5
1.1.10.02. Maltose transporter MalFGK, complex with protein EIIAglc 4jbw Escherichia coli Bact. Gram-neg inner 2 14 29.8 ± 0.8 4 ± 1 -107.8
1.1.46.01. MerF bacterial mercury uptake transporter, structure 2 2m67 Morganella morganii Bact. Gram-neg inner 1 2 24.2 ± 4.7 30 ± 1 -29.7
1.1.25.05. Bacterial proton:oligopeptide symporter, structure 1 4lep Shewanella oneidensis Bact. Gram-neg inner 1 14 29.4 ± 0.6 7 ± 0 -89.1
1.1.35.01. Sodium/proton antiporter 1 (NhaA), dimer, different conformation 4atv Escherichia coli Bact. Gram-neg inner 2 24 28.6 ± 1.3 1 ± 0 -154.7
1.1.01.01. Sensory rhodopsin, trimer 2m3g Nostoc sp. Bact. Gram-neg inner 3 21 31.8 ± 0.8 2 ± 0 -132.8
1.1.25.03. Transporter YajR 3wdo Escherichia coli Bact. Gram-neg inner 1 12 31.0 ± 1.4 2 ± 0 -81.8
1.1.80.01. Phospho-N-acetylmuramoyl-pentapeptide-transferase, structure 1 4j72 Aquifex aeolicus Bact. Gram-neg inner 2 20 31.4 ± 1.2 0 ± 0 -141.4
1.1.35.02. Na+/H+ antiporter 4bwz Thermus thermophilus Bact. Gram-neg inner 2 26 29.6 ± 0.6 0 ± 0 -120.8
1.2.12.01. Geopilin domain 1 protein 2m7g Geobacter sulfurreducens Bact. Gram-neg inner 1 1 29.8 ± 4.2 39 ± 8 -26.8
1.1.12.09. Sodium channel NavMs, open state 2 3zjz Magnetococcus marinus Bact. Gram-neg inner 4 8 29.8 ± 1.8 0 ± 1 -61.1
1.1.26.04. L-carnitine/gamma-butyrobetaine antiporter 4m8j Proteus mirabilis Bact. Gram-neg inner 3 36 29.8 ± 0.8 0 ± 0 -220.2
1.1.28.01. Heavy metal cation tricomponent efflux pump, ZneA 4k0e Ralstonia metallidurans Bact. Gram-neg inner 3 36 28.0 ± 0.7 0 ± 0 -161.5
1.1.12.09. Sodium channel BacNaV 4lto Alkalilimnicola ehrlichei Bact. Gram-neg inner 4 8 30.6 ± 1.1 2 ± 1 -97.3
1.1.11.01. Ribosome-SecYE complex, structure 2 3j45 Escherichia coli Bact. Gram-neg inner 3 13 26.8 ± 0.2 10 ± 0 -65.3
1.1.11.01. Ribosome-SecYE complex, structure 3 3j46 Escherichia coli Bact. Gram-neg inner 4 14 27.2 ± 1.0 14 ± 0 -56.8
1.2.28.01. Transmembrane regulatory peptide MgtR 2mc7 Salmonella enterica Bact. Gram-neg inner 1 1 31.8 ± 2.2 13 ± 4 -26.8
1.1.15.02. Proton-gated ion channel, conformation 2 4lmj Gloeobacter violaceus Bact. Gram-neg inner 5 20 32.4 ± 0.7 0 ± 0 -177.4
1.1.15.02. Proton-gated ion channel, conformation 3 4lml Gloeobacter violaceus Bact. Gram-neg inner 5 20 31.8 ± 0.7 0 ± 0 -178.8
1.1.02.04. Reaction center-LH1-PufX dimer complex, unit 1 4jcb Rhodobacter sphaeroides Bact. Gram-neg inner 32 40 28.0 ± 0.5 1 ± 0 -127.0
1.1.02.04. Reaction center-LH1-PufX dimer complex, unit 2 4jc9 Rhodobacter sphaeroides Bact. Gram-neg inner 32 40 28.4 ± 0.7 1 ± 0 -126.6
1.1.12.13. Potassium channel Kirbac3.1, open conformation 2 4lp8 Magnetospirillum magnetotacticum Bact. Gram-neg inner 4 8 29.2 ± 0.8 0 ± 0 -89.2
1.1.33.01. Sodium bile acid symporter, outward-open conformation 1 4n7x Yersinia frederiksenii Bact. Gram-neg inner 1 10 28.6 ± 1.0 12 ± 0 -79.7
1.1.33.01. Sodium bile acid symporter, inward-open conformation 2 4n7w Yersinia frederiksenii Bact. Gram-neg inner 10 10 28.8 ± 1.4 12 ± 3 -68.9
1.1.09.01. Copper efflux ATPase, E2P state 4bbj Legionella pneumophila Bact. Gram-neg inner 1 8 30.2 ± 0.9 16 ± 1 -69.4
1.1.15.02. Proton-gated ion channel, resting state 4npq Gloeobacter violaceus Bact. Gram-neg inner 5 20 33.8 ± 2.1 1 ± 0 -185.4
1.1.12.04. Bacterial cyclic nucleotide regulated ion channel, full structure 4chw Rhizobium loti Bact. Gram-neg inner 4 24 29.8 ± 0.6 0 ± 0 -187.8
1.1.12.04. Bacterial cyclic nucleotide regulated ion channel, full structure, with cAMP 4chv Rhizobium loti Bact. Gram-neg inner 4 24 28.4 ± 0.5 0 ± 0 -138.2
1.1.25.08. Na+/melibiose symporter 4m64 Salmonella typhimurium Bact. Gram-neg inner 1 12 30.4 ± 1.3 11 ± 0 -64.9
1.1.51.01. Vitamin K epoxide reductase, conformation 2 4nv2 Synechococcus sp. Bact. Gram-neg inner 1 5 29.6 ± 2.0 6 ± 0 -50.3
2.1.02.01. Linoleate 9/13-lipoxygenase 4g32 Pseudomonas aeruginosa Bact. Gram-neg inner 1 0 5.8 ± 0.9 33 ± 2 -10.7
2.1.02.01. Linoleate 9/13-lipoxygenase, with N-terminal helix 4g33 Pseudomonas aeruginosa Bact. Gram-neg inner 1 0 4.3 ± 0.0 16 ± 0 -9.1
1.1.10.03. ABC transporter related protein 4mrs Novosphingobium aromaticivorans Bact. Gram-neg inner 2 12 32.0 ± 1.0 0 ± 0 -92.5
1.1.02.04. LH1-RC complex, C2 form 3wmm Thermochromatium tepidum Bact. Gram-neg inner 35 43 35.8 ± 0.0 1 ± 0 -254.6
1.1.02.04. LH1-RC complex, P21 form 3wmo Thermochromatium tepidum Bact. Gram-neg inner 35 43 31.8 ± 0.1 0 ± 0 -234.8
1.1.77.01. Cellulose synthase, structure 2 4p00 Rhodobacter sphaeroides Bact. Gram-neg inner 2 9 27.6 ± 1.2 19 ± 0 -82.0
1.1.77.01. Cellulose synthase, structure 3 4p02 Rhodobacter sphaeroides Bact. Gram-neg inner 2 9 29.8 ± 1.2 18 ± 1 -82.5
1.1.28.01. Multidrug efflux transporter AcrB-AcrZ complex, structure 1 4c48 Escherichia coli Bact. Gram-neg inner 6 39 29.2 ± 0.8 0 ± 0 -217.3
1.1.54.01. Diacylglycerol kinase (DAGK), conformation 2 4bpd Escherichia coli Bact. Gram-neg inner 3 9 29.4 ± 1.3 3 ± 2 -71.0
1.1.75.03. Sec-independent protein translocase protein TatB 2mi2 Escherichia coli Bact. Gram-neg inner 1 1 27.6 ± 2.5 22 ± 0 -18.5
1.1.87.01. Phosphatidylglycerophosphatase 5jwy Escherichia coli Bact. Gram-neg inner 1 6 30.8 ± 0.0 16 ± 2 -38.8
1.1.88.01. NAD(P) transhydrogenase, structure 1 4o9p Thermus thermophilus Bact. Gram-neg inner 4 24 29.8 ± 0.9 0 ± 0 -162.0
1.1.10.03. Microcin-J25 export ATP-binding/permease protein McjD 4pl0 Escherichia coli Bact. Gram-neg inner 2 12 32.4 ± 0.8 0 ± 0 -107.2
1.1.89.01. Inner membrane protein YgaP 2mpn Escherichia coli Bact. Gram-neg inner 2 4 30.0 ± 1.5 0 ± 1 -29.6
1.1.50.01. Particulate methane monooxygenase 4phz Methylocystis sp. Bact. Gram-neg inner 12 42 30.0 ± 0.9 0 ± 0 -200.6
1.1.90.01. Phosphatidate cytidylyltransferase, conformation 2 4q2g Thermotoga maritima Bact. Gram-neg inner 2 18 26.8 ± 0.4 0 ± 2 -55.6
1.1.25.05. Bacterial proton:oligopeptide symporter, structure 2 4tpg Shewanella oneidensis Bact. Gram-neg inner 14 14 30.8 ± 1.0 9 ± 0 -100.8
1.1.25.05. Bacterial proton:oligopeptide symporter, structure 3 4tpj Shewanella oneidensis Bact. Gram-neg inner 1 14 30.6 ± 0.9 9 ± 0 -90.0
1.1.01.01. Sensory rhodopsin, dimer 4tl3 Nostoc sp. Bact. Gram-neg inner 2 17 30.6 ± 1.1 0 ± 0 -116.0
1.1.54.01. Diacylglycerol kinase (DAGK), conformation 3 4d2e Escherichia coli Bact. Gram-neg inner 3 9 29.8 ± 0.7 2 ± 0 -65.6
1.1.46.01. MerF bacterial mercury uptake transporter, structure 3 2moz Morganella morganii Bact. Gram-neg inner 1 2 27.8 ± 1.9 16 ± 2 -33.5
1.1.28.01. Drug efflux protein MtrD 4mt1 Neisseria gonorrhoeae Bact. Gram-neg inner 3 36 29.0 ± 0.3 0 ± 0 -214.1
1.1.25.06. D-xylose-proton symporter xylE, conformation 4 4qiq Escherichia coli Bact. Gram-neg inner 1 12 29.8 ± 1.8 1 ± 1 -72.6
1.1.25.05. Dipeptide permease D 4q65 Escherichia coli Bact. Gram-neg inner 1 14 30.2 ± 0.8 7 ± 1 -101.4
1.1.09.01. Zinc-transporting ATPase, ZntA, E2P state 4umv Shigella sonnei Bact. Gram-neg inner 1 8 30.6 ± 1.5 11 ± 2 -56.7
1.1.09.01. Zinc-transporting ATPase, ZntA, E2.PI state 4umw Shigella sonnei Bact. Gram-neg inner 1 8 31.0 ± 1.2 19 ± 2 -65.9
2.3.10.07. Lipopolysaccharide biosynthesis protein RfaG 2iw1 Escherichia coli Bact. Gram-neg inner 1 0 3.7 ± 3.1 85 ± 8 -6.0
1.1.041.01. Bacterial semiSWEET transporter 4qnc Leptospira biflexa Bact. Gram-neg inner 2 6 31.8 ± 1.6 4 ± 2 -66.5
1.1.041.01. Bacterial semiSWEET transporter 4qnd Vibrio sp. Bact. Gram-neg inner 2 6 33.0 ± 1.7 0 ± 0 -61.5
1.1.60.01. Protease GlpG, complex with peptide-based inhibitor 4qo2 Escherichia coli Bact. Gram-neg inner 1 6 28.6 ± 1.2 18 ± 0 -58.3
1.1.15.02. Proton-gated ion channel, pore blocker-bound conformation 4twd Erwinia chrysanthemi Bact. Gram-neg inner 5 20 32.0 ± 0.6 0 ± 0 -127.8
1.2.47.01. Nickel-cobalt-cadmium resistance protein NccX 4clv Alcaligenes xylosoxidans Bact. Gram-neg inner 1 0 3.1 ± 0.9 83 ± 0 -6.7
1.1.42.01. Nicotinamide riboside transporter PnuC 4qtn Neisseria mucosa Bact. Gram-neg inner 3 24 26.8 ± 0.7 0 ± 0 -112.0
1.1.91.01. Delta(14)-sterol reductase 4quv Methylomicrobium alcaliphilum Bact. Gram-neg inner 1 10 28.2 ± 1.4 11 ± 3 -81.4
1.1.11.01. Ribosome-SecYE complex, structure 4 4v7i Escherichia coli Bact. Gram-neg inner 3 12 29.4 ± 0.8 19 ± 0 -79.5
1.1.10.01. ABC transporter BtuCD, a nucleotide-bound outward facing state 4r9u Escherichia coli Bact. Gram-neg inner 2 20 28.6 ± 1.3 1 ± 1 -119.8
1.1.041.01. Bacterial semiSWEET transporter 4rng Thermodesulfovibrio yellowstonii Bact. Gram-neg inner 2 6 35.4 ± 2.5 5 ± 3 -72.8
3.1.02.16. Peptide 211-263 of YscU protein 2ml9 Yersinia pseudotuberculosis Bact. Gram-neg inner 1 0 2.9 ± 1.8 82 ± 5 -6.6
1.1.41.01. Magnesium ion transporter-E (MgtE), structure 2 4u9n Thermus thermophilus Bact. Gram-neg inner 2 10 31.8 ± 0.8 0 ± 0 -85.3
1.1.92.01. Na(+)-translocating NADH-quinone reductase 4p6v Vibrio cholerae Bact. Gram-neg inner 5 24 28.8 ± 0.3 5 ± 0 -111.8
1.1.30.01. Membrane protein insertase YidC, structure 1 3wvf Escherichia coli Bact. Gram-neg inner 1 5 26.8 ± 1.3 10 ± 2 -46.7
1.1.041.01. Bacterial semiSWEET transporter, inward-open conformation 4x5m Escherichia coli Bact. Gram-neg inner 2 6 31.6 ± 1.9 0 ± 3 -66.6
1.1.041.01. Bacterial semiSWEET transporter, outward-open conformation 4x5n Escherichia coli Bact. Gram-neg inner 2 6 36.8 ± 1.1 1 ± 3 -70.5
1.1.88.01. NAD(P) transhydrogenase, structure 2 4o9u Thermus thermophilus Bact. Gram-neg inner 4 24 30.6 ± 1.1 1 ± 0 -150.7
1.1.25.05. Glutathione uptake transporter, structure 2 4uvm Shewanella oneidensis Bact. Gram-neg inner 1 14 29.8 ± 0.7 10 ± 0 -105.3
1.1.15.02. Proton-gated ion channel - human GLRA1 channel chimera 4x5t Gloeobacter violaceus Bact. Gram-neg inner 5 20 35.8 ± 0.1 0 ± 0 -107.4
1.1.94.01. Ascorbate-specific permease IIC component UlaA, structure 1 4rp8 Escherichia coli Bact. Gram-neg inner 2 22 29.6 ± 0.4 3 ± 0 -129.1
1.1.94.01. Ascorbate-specific permease IIC component UlaA, structure 2 4rp9 Escherichia coli Bact. Gram-neg inner 2 22 29.8 ± 0.6 2 ± 0 -141.1
1.1.01.01. Sodium pumping rhodopsin, NaR, monomer 4xtl Dokdonia eikasta Bact. Gram-neg inner 1 7 29.8 ± 1.9 20 ± 2 -57.4
1.1.01.01. Sodium pumping rhodopsin, NaR, pentamer 4xto Dokdonia eikasta Bact. Gram-neg inner 5 35 29.8 ± 0.5 0 ± 0 -170.3
1.1.72.02. Antibiotic resistance efflux pump MtrF 4r1i Neisseria gonorrhoeae Bact. Gram-neg inner 2 22 28.9 ± 1.4 0 ± 0 -118.2
1.1.01.01. Sodium pumping rhodopsin, NaR, dimer 3x3b Dokdonia eikasta Bact. Gram-neg inner 2 14 29.8 ± 0.9 0 ± 0 -87.5
1.1.75.02. Sec-independent protein translocase TatA, dimer 2mn6 Escherichia coli Bact. Gram-neg inner 2 2 23.0 ± 1.2 47 ± 0 -26.5
1.1.72.02. YdaH transporter 4r0c Alcanivorax borkumensis Bact. Gram-neg inner 2 22 29.8 ± 0.5 0 ± 0 -155.5
1.1.08.01. F1F0 ATP synthase subunit c, deprotonated form 1c99 Escherichia coli Bact. Gram-neg inner 1 2 30.2 ± 3.0 36 ± 3 -30.7
1.1.08.01. F1F0 ATP synthase subunit c, double mutant 1l6t Escherichia coli Bact. Gram-neg inner 1 2 30.0 ± 4.4 36 ± 3 -28.2
1.2.52.01. Cytochrome c-type biogenesis protein CcmE 1sr3 Escherichia coli Bact. Gram-neg inner 1 0 2.8 ± 2.7 59 ± 6 -2.2
1.1.25.07. Nitrate/nitrite exchanger NarK, occluded state 4u4w Escherichia coli Bact. Gram-neg inner 1 12 30.0 ± 1.4 10 ± 1 -91.0
1.1.25.07. Nitrate/nitrite exchanger NarK, inward-open state 4u4t Escherichia coli Bact. Gram-neg inner 1 12 31.2 ± 1.1 5 ± 1 -94.2
1.1.10.02. Alg transporter 4tqu Sphingomonas sp. Bact. Gram-neg inner 2 12 30.6 ± 0.8 3 ± 0 -100.1
1.1.12.09. Na(v)Rh voltage-gated sodium channel 4dxw Alpha proteobacterium Bact. Gram-neg inner 4 24 29.2 ± 0.7 4 ± 0 -149.7
2.3.10.07. Lipopolysaccharide biosynthesis protein RfaG, 103-131 2n58 Escherichia coli Bact. Gram-neg inner 1 0 4.5 ± 1.1 64 ± 7 -6.3
1.1.10.03. Oligosaccharide flippase PglK, inward-open, structure 1 5c78 Campylobacter jejuni Bact. Gram-neg inner 2 12 31.0 ± 1.1 2 ± 1 -120.6
1.1.10.03. Oligosaccharide flippase PglK, inward-open, structure 2 5c76 Campylobacter jejuni Bact. Gram-neg inner 2 12 32.0 ± 0.8 1 ± 0 -120.5
1.1.25.03. Multidrug transporter MdfA 4zp0 Escherichia coli Bact. Gram-neg inner 1 12 29.8 ± 1.3 10 ± 0 -77.2
1.1.96.01. Fluoride ion transporter CrcB 5a43 Escherichia coli Bact. Gram-neg inner 2 8 31.8 ± 0.9 11 ± 0 -89.3
1.1.96.01. Fluoride ion transporter CrcB 5a40 Bordetella pertussis Bact. Gram-neg inner 2 8 30.8 ± 1.7 20 ± 1 -71.9
1.1.26.07. Fumarate transporter 5da0 Deinococcus radiodurans Bact. Gram-neg inner 1 14 26.8 ± 0.7 13 ± 1 -78.2
1.1.26.07. STAS domain of anion permease 3oiz Rhodobacter sphaeroides Bact. Gram-neg inner 1 0 3.9 ± 0.4 18 ± 5 -5.4
1.1.26.07. STAS domain of sulfate permease 4dgh Vibrio cholerae Bact. Gram-neg inner 1 0 4.6 ± 0.6 33 ± 2 -6.2
1.1.26.07. STAS domain of sulfate permease 4dgf Wolinella succinogenes Bact. Gram-neg inner 1 0 2.6 ± 0.5 51 ± 2 -7.0
1.1.15.02. Proton-gated ion channel, Glic/Elic chimera 4yeu Gloeobacter violaceus Bact. Gram-neg inner 5 20 32.6 ± 1.1 0 ± 0 -162.5
1.1.38.01. Na+/drug antiporter NorM, outward-open, structure 2 5c6p Neisseria gonorrhoeae Bact. Gram-neg inner 1 12 28.6 ± 1.1 13 ± 0 -45.3
2.1.59.01. AcrH-AopB chaperone-translocator complex 3wxx Aeromonas hydrophila Bact. Gram-neg inner 2 0 3.6 ± 2.2 51 ± 3 -7.4
1.1.08.01. F1F0 ATP synthase 5dn6 Paracoccus denitrificans Bact. Gram-neg inner 13 25 36.8 ± 0.3 3 ± 1 -57.9
1.1.25.09. Iron-regulated transporter, outward-facing state 5ayn Bdellovibrio bacteriovorus Bact. Gram-neg inner 1 12 29.8 ± 1.8 8 ± 4 -82.9
1.1.25.09. Iron-regulated transporter, inward-facing state 5ayo Bdellovibrio bacteriovorus Bact. Gram-neg inner 1 12 31.6 ± 0.7 7 ± 1 -89.2
1.1.11.01. Protein translocase SecY, resting state 5aww Thermus thermophilus Bact. Gram-neg inner 3 13 29.8 ± 1.2 5 ± 0 -111.5
1.1.11.01. Protein translocase SecY, peptide-bound 5ch4 Thermus thermophilus Bact. Gram-neg inner 3 13 29.8 ± 1.5 5 ± 1 -103.5
2.1.02.01. 9R-lipoxygenase 5ek8 Synechococcus sp. Bact. Gram-neg inner 1 0 4.0 ± 0.7 78 ± 6 -12.2
1.1.12.09. Voltage-gated sodium channel Nav1.7- NavAb, with antagonist 5ek0 Arcobacter butzleri Bact. Gram-neg inner 4 24 30.2 ± 0.6 0 ± 0 -236.2
1.1.98.01. Polyisoprenyl-phosphate glycosyltransferase GtrB 5eke Synechocystis sp. Bact. Gram-neg inner 4 8 31.4 ± 1.2 0 ± 0 -82.3
1.1.38.01. Multidrug transporter MatE 4z3n Escherichia coli Bact. Gram-neg inner 1 12 29.6 ± 1.1 7 ± 1 -93.1
1.1.35.02. Na+/H+ antiporter, inward-open conformation 5bz2 Thermus thermophilus Bact. Gram-neg inner 2 26 29.8 ± 0.5 3 ± 0 -132.9
1.1.35.02. Na+/H+ antiporter, outward-open conformation 5bz3 Thermus thermophilus Bact. Gram-neg inner 2 26 29.2 ± 0.8 0 ± 0 -108.2
1.1.99.01. Prolipoprotein diacylglyceryl transferase 5azb Escherichia coli Bact. Gram-neg inner 1 7 30.2 ± 1.5 8 ± 1 -68.8
1.1.35.03. Citrate-sodium symporter 5a1s Salmonella enterica Bact. Gram-neg inner 2 22 28.6 ± 0.9 5 ± 0 -133.4
1.1.52.02. 4-amino-4-deoxy-L-arabinose transferase 5f15 Cupriavidus metallidurans Bact. Gram-neg inner 1 13 29.2 ± 0.7 3 ± 0 -93.8
1.1.21.01. CorA magnesium transporter, complete loops, structure 2 3jcf Thermotoga maritima Bact. Gram-neg inner 5 10 31.6 ± 0.7 0 ± 0 -78.0
1.1.12.09. Sodium channel NavMs, full-length 5hvx Magnetococcus marinus Bact. Gram-neg inner 4 24 29.0 ± 0.6 0 ± 0 -159.6
1.1.77.01. Cellulose synthase, structure 4 5ejz Rhodobacter sphaeroides Bact. Gram-neg inner 1 8 29.6 ± 1.1 18 ± 0 -86.9
1.1.12.09. Sodium channel BacNaV, channel neck mutants 5hj8 Alkalilimnicola ehrlichei Bact. Gram-neg inner 4 8 30.6 ± 1.1 0 ± 0 -96.1
1.1.15.02. Proton-gated ion channel, conformation 4 5heo Gloeobacter violaceus Bact. Gram-neg inner 5 20 32.0 ± 0.8 0 ± 0 -121.8
1.1.15.02. Proton-gated ion channel, conformation 5 5heh Gloeobacter violaceus Bact. Gram-neg inner 5 20 33.4 ± 1.0 0 ± 0 -183.3
1.1.15.02. Proton-gated ion channel, conformation 6 5heg Gloeobacter violaceus Bact. Gram-neg inner 5 20 32.0 ± 0.8 0 ± 0 -186.8
1.1.80.01. Phospho-N-acetylmuramoyl-pentapeptide-transferase, structure 2 5ckr Aquifex aeolicus Bact. Gram-neg inner 2 20 30.4 ± 1.1 0 ± 0 -149.3
1.1.78.01. Lipoprotein signal peptidase 5dir Pseudomonas aeruginosa Bact. Gram-neg inner 1 4 29.8 ± 1.9 13 ± 0 -42.7
1.1.15.02. Proton-gated ion channel, conformation 7 5hcm Gloeobacter violaceus Bact. Gram-neg inner 5 20 32.0 ± 1.4 0 ± 0 -184.3
1.1.01.01. Bacteriorhodopsin 5azd Thermus thermophilus Bact. Gram-neg inner 4 28 30.0 ± 0.5 3 ± 1 -121.3
1.1.07.01. Nitric oxide reductase 4xyd Roseobacter denitrificans Bact. Gram-neg inner 2 13 31.4 ± 1.1 7 ± 1 -101.6
1.1.26.01. Leucine transporter LeuT, outward-facing, return state 5jae Aquifex aeolicus Bact. Gram-neg inner 2 24 29.0 ± 0.8 0 ± 0 -143.0
1.1.26.01. Leucine transporter LeuT, outward-facing, return state, mutant 5jag Aquifex aeolicus Bact. Gram-neg inner 1 12 26.8 ± 1.1 11 ± 0 -80.7
1.1.29.01. YddG transporter 5i20 Starkeya novella Bact. Gram-neg inner 1 10 30.2 ± 1.3 0 ± 0 -78.1
1.1.39.01. Riboflavin transporter RibU 5kbw Thermotoga maritima Bact. Gram-neg inner 1 6 32.4 ± 1.6 8 ± 1 -52.7
1.1.01.01. Chloride pumping rhodopsin 5b2n Nonlabens marinus Bact. Gram-neg inner 1 7 32.0 ± 1.0 12 ± 0 -63.1
1.1.02.07. Bacteriochlorophyll c-binding protein, complex with chlorophyll 5lcb Chlorobium tepidum Bact. Gram-neg inner 6 0 13.0 ± 0.0 89 ± 0 -54.3
1.1.02.07. Bacteriochlorophyll c-binding protein 2k37 Chlorobium tepidum Bact. Gram-neg inner 1 0 5.8 ± 0.2 87 ± 2 -17.8
2.3.05.03. L-amino acid deaminase 5hxw Proteus vulgaris Bact. Gram-neg inner 1 0 6.4 ± 2.1 86 ± 6 -9.0
1.1.12.09. Voltage-gated sodium channel NavAb, structure 3 5klb Arcobacter butzleri Bact. Gram-neg inner 4 24 30.8 ± 0.3 1 ± 0 -218.3
1.1.26.05. Arginine/agmatine antiporter (AdiC), outward-facing structure 2 5j4i Escherichia coli Bact. Gram-neg inner 2 24 32.8 ± 0.9 0 ± 0 -155.1
1.2.42.01. UDP-2,3-diacylglucosamine hydrolase, lpxH 5k8k Haemophilus influenzae Bact. Gram-neg inner 1 0 9.3 ± 1.8 13 ± 7 -8.7
1.1.56.01. Inner membrane protein YejM, strain LT2 5i5f Salmonella typhimurium Bact. Gram-neg inner 1 0 3.7 ± 2.4 62 ± 11 -4.9
1.1.56.01. Inner membrane protein YejM, strain K12 5i5h Salmonella typhimurium Bact. Gram-neg inner 1 0 1.1 ± 1.6 65 ± 2 -3.6
1.1.103.01. ExbB/ExbD complex, structure 1 5sv0 Escherichia coli Bact. Gram-neg inner 5 15 31.8 ± 0.8 1 ± 1 -102.1
1.1.103.01. ExbB/ExbD complex, structure 2 5sv1 Escherichia coli Bact. Gram-neg inner 6 16 30.8 ± 0.5 2 ± 0 -109.5
1.2.42.01. UDP-2,3-diacylglucosamine hydrolase 5b49 Pseudomonas aeruginosa Bact. Gram-neg inner 1 0 9.9 ± 1.9 42 ± 16 -4.9
1.1.06.01. Cytochrome bc1, bacterial, structure 2 5kkz Rhodobacter sphaeroides Bact. Gram-neg inner 5 19 32.0 ± 1.0 2 ± 0 -195.4
1.1.06.01. Cytochrome bc1, bacterial, structure 3 5kli Rhodobacter sphaeroides Bact. Gram-neg inner 6 20 29.8 ± 1.6 0 ± 0 -180.0
1.2.12.01. Fimbrial protein, type IV pilin, assembly 5kua Neisseria meningitidis Bact. Gram-neg inner 3 3 36.4 ± 1.6 31 ± 1 -53.4
1.1.10.01. Heme importer BhuUV 5b57 Burkholderia cepacia Bact. Gram-neg inner 2 20 28.6 ± 0.8 1 ± 1 -85.4
1.1.10.01. Heme importer BhuUV, with BhuT protein 5b58 Burkholderia cepacia Bact. Gram-neg inner 2 20 29.0 ± 1.0 0 ± 0 -81.6
1.1.37.01. Divalent metal cation transporter MntH 5kte Deinococcus radiodurans Bact. Gram-neg inner 1 11 29.8 ± 0.8 7 ± 1 -63.3
1.1.66.01. K(+)-pumping pyrophosphatase, structure 3 5lzq Thermotoga maritima Bact. Gram-neg inner 2 32 31.0 ± 0.6 0 ± 0 -185.6
1.1.30.01. Membrane protein insertase YidC, structure 2 5m5h Escherichia coli Bact. Gram-neg inner 1 5 30.2 ± 2.2 18 ± 1 -41.3
1.1.15.02. Proton-gated ion channel, conformation 8 5l4h Gloeobacter violaceus Bact. Gram-neg inner 5 20 31.8 ± 1.4 0 ± 1 -175.1
1.1.11.01. Holo-translocon 5mg3 Escherichia coli Bact. Gram-neg inner 6 29 30.6 ± 0.8 5 ± 0 -123.2
1.1.38.02. Lipid II flippase MurJ, inward-facing conformation 5t77 Thermosipho africanus Bact. Gram-neg inner 1 14 30.6 ± 1.4 3 ± 0 -124.8
1.1.104.01. Trimeric intracellular cation channel 5h36 Rhodobacter sphaeroides Bact. Gram-neg inner 3 21 31.0 ± 1.0 0 ± 0 -124.3
1.1.56.01. Lipooligosaccharide phosphoethanolamine transferase A (EptA) 5fgn Neisseria meningitidis Bact. Gram-neg inner 1 5 27.8 ± 1.4 35 ± 0 -53.8
1.1.21.01. CorA magnesium transporter, complete loops, structure 3 5jrw Thermotoga maritima Bact. Gram-neg inner 5 10 31.0 ± 0.6 0 ± 0 -80.2
1.1.10.07. Heterodimeric ABC transporter TmrAB 5mkk Thermus thermophilus Bact. Gram-neg inner 2 12 31.0 ± 0.6 5 ± 0 -78.8
1.1.10.03. Type-1 secretion system ABC transporter (HlyB-like) 5l22 Aquifex aeolicus Bact. Gram-neg inner 2 12 33.0 ± 1.4 1 ± 0 -111.8
1.1.15.02. Proton-gated ion channel, conformation 9 5j0z Gloeobacter violaceus Bact. Gram-neg inner 5 20 32.2 ± 1.4 0 ± 0 -171.9
2.2.07.01. Lipocalin BcnB 5ixg Burkholderia cepacia Bact. Gram-neg inner 1 0 2.0 ± 1.0 36 ± 5 -3.9
2.2.07.01. Lipocalin BcnA 5ixh Burkholderia cepacia Bact. Gram-neg inner 1 0 1.4 ± 2.6 28 ± 29 -1.7
1.1.10.10. ABC transporter LptB2FG 5x5y Pseudomonas aeruginosa Bact. Gram-neg inner 2 12 31.0 ± 0.6 5 ± 1 -104.8
1.1.12.09. Voltage-gated sodium channel NavAb, structure 4 (closed) 5vb2 Arcobacter butzleri Bact. Gram-neg inner 4 24 31.0 ± 0.8 0 ± 0 -228.1
1.1.12.09. Voltage-gated sodium channel NavAb, structure 5 (open) 5vb8 Arcobacter butzleri Bact. Gram-neg inner 4 24 31.4 ± 0.8 0 ± 0 -229.5
1.1.39.04. CbiMQO-complex, structure 1 5x3x Rhodobacter capsulatus Bact. Gram-neg inner 2 8 30.2 ± 1.0 9 ± 0 -52.8
1.1.28.01. Multidrug efflux transporter AcrB-AcrZ complex, structure 2 5nc5 Escherichia coli Bact. Gram-neg inner 6 39 29.8 ± 0.6 1 ± 0 -215.8
1.1.12.04. Cyclic nucleotide-gated ion Channel 5v4s Leptospira licerasiae Bact. Gram-neg inner 4 24 31.0 ± 0.2 0 ± 0 -223.4
1.1.65.01. Concentrative nucleoside transporter, intermediate 2 state 5l24 Neisseria wadsworthii Bact. Gram-neg inner 3 24 26.6 ± 1.2 5 ± 0 -163.9
1.1.65.01. Concentrative nucleoside transporter, intermediate 1 state 5l27 Neisseria wadsworthii Bact. Gram-neg inner 3 24 27.8 ± 1.2 2 ± 0 -166.9
1.1.65.01. Concentrative nucleoside transporter, inward-facing state 5l26 Neisseria wadsworthii Bact. Gram-neg inner 3 24 29.0 ± 0.4 0 ± 0 -168.2
1.1.65.01. Concentrative nucleoside transporter, intermediate 3 state 5u9w Neisseria wadsworthii Bact. Gram-neg inner 3 24 29.0 ± 0.2 2 ± 0 -155.3
1.1.65.01. Concentrative nucleoside transporter, outward-facing state 5l2a Neisseria wadsworthii Bact. Gram-neg inner 3 24 27.8 ± 0.6 0 ± 0 -164.7
1.1.28.01. AcrAB-TolC efflux pump, structure 1 5v78 Escherichia coli Bact. Gram-neg inner 3 39 27.0 ± 1.0 0 ± 0 -156.1
1.1.28.01. AcrAB-TolC efflux pump, structure 2 5v5s Escherichia coli Bact. Gram-neg inner 3 36 28.6 ± 1.0 0 ± 0 -180.0
1.1.39.04. CbiMQO-complex, structure 2 5x41 Rhodobacter capsulatus Bact. Gram-neg inner 2 9 30.0 ± 1.0 24 ± 0 -37.8
1.1.10.03. Oligosaccharide flippase PglK, inward-open, structure 3 5nbd Campylobacter jejuni Bact. Gram-neg inner 2 12 31.0 ± 0.6 6 ± 0 -97.7
1.1.11.01. Ribosome-SRP-SecYE complex 5gae Escherichia coli Bact. Gram-neg inner 3 12 29.8 ± 1.0 9 ± 1 -85.3
1.1.28.03. SecDF secretion protein, structure 1 5xam Deinococcus radiodurans Bact. Gram-neg inner 1 12 30.2 ± 1.0 4 ± 1 -83.1
1.1.28.03. SecDF secretion protein, structure 2 5xan Deinococcus radiodurans Bact. Gram-neg inner 1 12 29.0 ± 1.6 5 ± 0 -99.8
1.1.28.03. SecDF secretion protein, structure 3 5xap Deinococcus radiodurans Bact. Gram-neg inner 1 12 30.2 ± 0.8 2 ± 1 -97.2
2.1.02.01. Arachidonate 15-lipoxygenase 5med Synechococcus sp. Bact. Gram-neg inner 1 0 3.3 ± 1.6 75 ± 7 -7.4
1.1.108.01. Nitrate/nitrite sensor histidine kinase NarQ, structure 1 5iji Escherichia coli Bact. Gram-neg inner 2 4 31.8 ± 2.0 0 ± 1 -57.1
1.1.108.01. Nitrate/nitrite sensor histidine kinase NarQ, structure 2 5jef Escherichia coli Bact. Gram-neg inner 2 4 33.8 ± 2.8 17 ± 2 -59.0
1.1.108.01. Nitrate/nitrite sensor histidine kinase NarQ, structure 3 5jeq Escherichia coli Bact. Gram-neg inner 2 4 31.8 ± 1.4 2 ± 1 -60.1
1.1.108.01. Nitrate/nitrite sensor histidine kinase NarQ, structure 4 5jgp Escherichia coli Bact. Gram-neg inner 2 4 31.4 ± 1.2 0 ± 0 -56.7
1.1.15.02. Proton-gated ion channel, inactive conformation 6 5sxv Erwinia chrysanthemi Bact. Gram-neg inner 5 20 30.6 ± 0.6 1 ± 0 -100.4
1.1.15.02. Proton-gated ion channel, inactive conformation 7 5sxu Erwinia chrysanthemi Bact. Gram-neg inner 5 20 30.2 ± 0.8 1 ± 0 -100.5
1.1.09.01. KdpFABC complex 5mrw Escherichia coli Bact. Gram-neg inner 4 19 29.4 ± 2.0 3 ± 1 -98.1
1.1.109.01. NADPH oxidase 5 (NOX5) 5o0t Cylindrospermum stagnale Bact. Gram-neg inner 1 6 29.4 ± 1.4 10 ± 4 -59.6
1.1.28.05. Hopanoid transporter HpnN, structure 1 5khn Burkholderia multivorans Bact. Gram-neg inner 2 24 27.8 ± 1.0 0 ± 0 -111.2
1.1.28.05. Hopanoid transporter HpnN, structure 2 5khs Burkholderia multivorans Bact. Gram-neg inner 2 24 28.2 ± 0.8 0 ± 0 -100.7
1.1.28.01. AcrABZ-TolC multidrug efflux pump 5o66 Escherichia coli Bact. Gram-neg inner 6 39 28.6 ± 0.4 1 ± 0 -203.4
1.1.35.03. Citrate-sodium symporter CitS, structure 1 5xar Klebsiella pneumoniae Bact. Gram-neg inner 2 22 30.2 ± 0.6 0 ± 0 -138.2
1.1.35.03. Citrate-sodium symporter CitS, structure 2 5xat Klebsiella pneumoniae Bact. Gram-neg inner 2 22 27.4 ± 1.0 3 ± 0 -123.5
1.1.35.03. Citrate-sodium symporter CitS, structure 3 5xas Klebsiella pneumoniae Bact. Gram-neg inner 2 22 27.0 ± 1.0 6 ± 0 -130.6
1.1.35.03. Citrate-sodium symporter CitS, structure 4 5x9r Klebsiella pneumoniae Bact. Gram-neg inner 2 22 29.4 ± 2.0 2 ± 0 -103.2
1.3.01.01. Outer membrane protein A (OMPA), disordered loops 1qjp Escherichia coli Bact. Gram-neg outer 1 8 25.4 ± 1.5 11 ± 1 -29.5
1.3.01.02. Outer membrane protein X (OMPX) 1qj8 Escherichia coli Bact. Gram-neg outer 1 8 23.6 ± 2.8 12 ± 5 -30.7
1.3.02.01. Outer membrane protein NspA 1p4t Neisseria meningitidis Bact. Gram-neg outer 1 8 24.9 ± 2.4 22 ± 3 -42.9
1.3.07.01. Plasminogen activator PLA (coagulase/fibrinolysin) 2x55 Yersinia pestis Bact. Gram-neg outer 1 10 25.6 ± 1.9 4 ± 5 -43.9
1.3.08.01. Outer membrane adhesin/invasin OpcA 1k24 Neisseria meningitidis Bact. Gram-neg outer 1 10 25.4 ± 1.3 10 ± 11 -41.7
1.3.11.01. Autotransporter NalP 1uyn Neisseria meningitidis Bact. Gram-neg outer 1 12 25.3 ± 1.3 8 ± 8 -47.6
1.3.12.01. Outer membrane phospholipase A, dimer 1qd6 Escherichia coli Bact. Gram-neg outer 2 24 23.9 ± 1.0 0 ± 0 -77.2
1.3.13.01. Bacterial Nucleoside Transporter Ts 1tly Escherichia coli Bact. Gram-neg outer 1 12 23.4 ± 1.5 8 ± 0 -48.1
1.3.14.01. Fatty Acid Transporter FadL 1t16 Escherichia coli Bact. Gram-neg outer 1 14 25.4 ± 1.3 6 ± 7 -58.0
1.3.16.01. Porin OmpF 3pox Escherichia coli Bact. Gram-neg outer 3 48 24.0 ± 0.8 0 ± 0 -136.2
1.3.16.01. Outer membrane protein C 1osm Klebsiella pneumoniae Bact. Gram-neg outer 3 48 24.0 ± 1.1 0 ± 0 -136.6
1.3.16.01. Anion-selective porin 2fgq Comamonas acidovorans Bact. Gram-neg outer 3 48 25.0 ± 0.9 0 ± 0 -130.8
1.3.16.02. Porin 2por Rhodobacter capsulatus Bact. Gram-neg outer 3 48 23.4 ± 0.6 0 ± 0 -114.8
1.3.16.02. Porin 3prn Rhodopseudomonas blastica Bact. Gram-neg outer 3 48 23.2 ± 0.5 0 ± 0 -127.6
1.3.18.01. Maltoporin 1af6 Escherichia coli Bact. Gram-neg outer 3 54 25.1 ± 0.7 0 ± 0 -117.9
1.3.18.01. Maltoporin 2mpr Salmonella enterica Bact. Gram-neg outer 3 54 24.5 ± 1.0 0 ± 0 -109.7
1.3.18.01. Sucrose-specific porin 1a0s Salmonella enterica Bact. Gram-neg outer 3 54 23.8 ± 1.1 0 ± 0 -103.5
1.3.20.01. Ferric hydroxamate uptake receptor FhuA 1qfg Escherichia coli Bact. Gram-neg outer 1 22 24.7 ± 1.0 5 ± 1 -81.3
1.3.20.01. Ferric enterobactin receptor FepA 1fep Escherichia coli Bact. Gram-neg outer 1 22 24.3 ± 1.1 1 ± 0 -77.2
1.3.20.01. Outer membrane transporter FecA 1kmo Escherichia coli Bact. Gram-neg outer 1 22 24.5 ± 1.2 3 ± 0 -69.6
1.3.20.01. Outer membrane cobalamin transporter BtuB 1nqe Escherichia coli Bact. Gram-neg outer 1 22 23.4 ± 1.0 5 ± 0 -68.8
1.3.20.01. Pyoverdine Outer Membrane Receptor FpvA 2iah Pseudomonas aeruginosa Bact. Gram-neg outer 1 22 24.0 ± 0.5 8 ± 0 -79.7
1.3.24.01. Outer membrane protein TolC 1ek9 Escherichia coli Bact. Gram-neg outer 3 12 24.6 ± 1.4 0 ± 2 -56.1
1.3.24.01. Multidrug Resistance (VceC) protein 1yc9 Vibrio cholerae Bact. Gram-neg outer 3 12 24.6 ± 1.0 0 ± 0 -62.2
1.3.24.01. Drug-Discharge Outer Membrane Protein, OprM 1wp1 Pseudomonas aeruginosa Bact. Gram-neg outer 3 12 24.7 ± 1.2 0 ± 0 -64.0
1.3.21.01. P pilus usher PapC translocation domain 2vqi Escherichia coli Bact. Gram-neg outer 1 24 23.1 ± 1.0 3 ± 0 -61.0
2.2.06.01. Outer membrane lipoprotein Blc 1qwd Escherichia coli Bact. Gram-neg outer 1 0 3.2 ± 2.0 80 ± 15 -4.6
1.3.07.01. Outer membrane protease OmpT 1i78 Escherichia coli Bact. Gram-neg outer 1 10 26.5 ± 1.6 5 ± 6 -46.9
1.3.20.01. Fe(III)-pyochelin receptor FptA 1xkw Pseudomonas aeruginosa Bact. Gram-neg outer 1 22 24.8 ± 1.0 5 ± 4 -84.3
1.3.16.01. Phosphoporin (PhoE) 1pho Escherichia coli Bact. Gram-neg outer 3 48 24.1 ± 1.2 0 ± 0 -134.1
1.3.03.01. Outer membrane protein W 2f1v Escherichia coli Bact. Gram-neg outer 1 8 25.4 ± 1.4 10 ± 3 -38.3
2.1.12.01. Outer surface protein C 1g5z Borrelia burgdorferi Bact. Gram-neg outer 2 0 3.6 ± 0.6 2 ± 8 -7.0
1.2.26.01. Outer membrane lipoprotein Wza, water-soluble part 2w8h Escherichia coli Bact. Gram-neg outer 8 0 1.6 ± 0.2 1 ± 0 -22.1
1.3.04.03. Lipid A acylase PagP 3gp6 Escherichia coli Bact. Gram-neg outer 1 8 24.7 ± 1.5 40 ± 1 -32.5
1.3.19.02. Alginate export protein, AlgE, conformation 1 3rbh Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 23.4 ± 1.2 4 ± 0 -72.0
1.2.54.01. Dihydroorotate dehydrogenase 1f76 Escherichia coli Bact. Gram-neg outer 1 0 3.7 ± 0.8 24 ± 8 -8.7
1.3.21.01. Outer membrane usher protein FimD, complex with FimC-FimF-FimG-FimH 4j3o Escherichia coli Bact. Gram-neg outer 1 24 23.8 ± 1.4 1 ± 1 -52.9
1.3.20.01. Outer membrane transporter FecA, different conformation 1kmp Escherichia coli Bact. Gram-neg outer 1 22 24.9 ± 0.9 4 ± 0 -74.0
1.3.11.01. Autotransporter NalP, different conformation 1uyo Neisseria meningitidis Bact. Gram-neg outer 1 12 23.6 ± 1.4 8 ± 0 -42.7
1.3.05.01. Lipid A deacylase PagL 2erv Pseudomonas aeruginosa Bact. Gram-neg outer 1 8 24.7 ± 1.8 20 ± 2 -41.1
1.3.02.01. Outer membrane protein H (OprH) 2lhf Pseudomonas aeruginosa Bact. Gram-neg outer 1 8 20.6 ± 0.6 15 ± 3 -16.4
1.3.23.01. Autotransporter Hia, 992-1098 2gr7 Haemophilus influenzae Bact. Gram-neg outer 3 12 22.7 ± 2.0 0 ± 1 -43.5
1.3.20.01. Ferric hydroxamate uptake receptor FhuA, complex with TonB 2grx Escherichia coli Bact. Gram-neg outer 1 22 24.6 ± 1.1 3 ± 0 -77.2
1.3.20.01. Outer membrane cobalamin transporter BtuB, complex with TonB 2gsk Escherichia coli Bact. Gram-neg outer 1 22 23.4 ± 0.7 5 ± 0 -77.5
1.3.15.01. Outer membrane protein G (OMPG), open state 1 2iwv Escherichia coli Bact. Gram-neg outer 1 14 25.3 ± 1.4 3 ± 5 -61.3
1.3.15.01. Outer membrane protein G (OMPG), closed state 2iww Escherichia coli Bact. Gram-neg outer 1 14 24.7 ± 1.4 6 ± 4 -63.3
1.3.16.01. Osmoporin OMPC 2j1n Escherichia coli Bact. Gram-neg outer 3 48 25.1 ± 1.2 0 ± 2 -126.2
1.2.26.01. Outer membrane lipoprotein Wza 2j58 Escherichia coli Bact. Gram-neg outer 8 8 31.1 ± 0.8 0 ± 0 -123.8
1.3.16.03. Porin OprP 2o4v Pseudomonas aeruginosa Bact. Gram-neg outer 3 48 23.9 ± 1.1 0 ± 0 -129.6
1.3.20.01. Colicin I receptor complex with binding domain of Colicin Ia 2hdi Escherichia coli Bact. Gram-neg outer 1 22 23.4 ± 0.9 3 ± 3 -72.7
1.3.20.01. Colicin I receptor 2hdf Escherichia coli Bact. Gram-neg outer 1 22 23.4 ± 0.9 4 ± 0 -70.9
1.3.16.01. Osmoporin OMPC, isoform 1 2ixx Escherichia coli Bact. Gram-neg outer 3 48 26.2 ± 1.3 0 ± 1 -142.5
1.3.16.01. Osmoporin OMPC, isoform 2 2ixw Escherichia coli Bact. Gram-neg outer 3 48 24.5 ± 1.0 0 ± 0 -121.0
1.3.19.01. Outer membrane porin OprD 2odj Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 23.0 ± 0.8 8 ± 0 -63.1
1.3.11.01. Serine protease EspP, post-cleavage structure 2qom Escherichia coli Bact. Gram-neg outer 1 12 25.1 ± 1.6 6 ± 7 -55.9
1.3.20.01. Outer membrane cobalamin transporter BtuB, meso form 2guf Escherichia coli Bact. Gram-neg outer 1 22 23.4 ± 0.9 6 ± 7 -69.3
1.3.14.01. Toluene transporter TbuX 3bry Ralstonia pickettii Bact. Gram-neg outer 1 14 25.4 ± 1.5 1 ± 2 -57.7
1.3.14.01. Toluene transporter TodX 3bs0 Pseudomonas putida Bact. Gram-neg outer 1 14 23.4 ± 1.4 7 ± 7 -61.3
1.3.19.01. Protein OpdK 2qtk Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 23.3 ± 1.0 3 ± 0 -62.4
1.2.38.03. Endo-type membrane-bound lytic murein transglycosylase A 2y8p Escherichia coli Bact. Gram-neg outer 1 0 0.0 ± 3.6 86 ± 15 -2.2
1.3.23.01. Autotransporter Hia, 937-1098, a different conformation 3emo Haemophilus influenzae Bact. Gram-neg outer 3 12 22.8 ± 1.9 4 ± 0 -40.1
1.3.14.01. FadL homologue 3dwo Pseudomonas aeruginosa Bact. Gram-neg outer 1 14 24.8 ± 1.6 6 ± 3 -54.7
1.3.06.01. Major outer membrane protein TtoA 3dzm Thermus thermophilus Bact. Gram-neg outer 1 8 28.5 ± 2.6 6 ± 10 -50.3
1.3.01.01. Outer membrane protein A from Klebsiella 2k0l Klebsiella pneumoniae Bact. Gram-neg outer 1 8 24.3 ± 2.3 18 ± 6 -26.8
1.3.20.01. Hemophore receptor HasR, structure 1 3csl Serratia marcescens Bact. Gram-neg outer 1 22 25.4 ± 1.3 4 ± 5 -72.2
1.3.09.01. Lipid A deacylase LpxR 3fid Salmonella enterica Bact. Gram-neg outer 1 12 25.6 ± 2.0 24 ± 0 -58.6
1.3.20.01. Outer membrane receptor FauA 3efm Bordetella pertussis Bact. Gram-neg outer 1 22 24.7 ± 0.6 11 ± 0 -77.5
1.3.20.01. Outer membrane heme transporter ShuA 3fhh Shigella dysenteriae Bact. Gram-neg outer 1 22 24.6 ± 0.9 5 ± 0 -70.7
1.3.10.01. Acidic sugar-specific porin NanC 2wjr Escherichia coli Bact. Gram-neg outer 1 12 23.3 ± 1.5 4 ± 4 -47.5
1.3.19.01. BenF-like porin 3jty Pseudomonas fluorescens Bact. Gram-neg outer 1 18 24.2 ± 1.2 1 ± 0 -59.8
1.3.20.01. Outer membrane cobalamin transporter BtuB, complex with colicin E2 R-domain 2ysu Escherichia coli Bact. Gram-neg outer 1 22 24.2 ± 1.0 5 ± 0 -75.2
1.3.20.01. Outer membrane cobalamin transporter BtuB, complex with colicin E3 R-domain 1ujw Escherichia coli Bact. Gram-neg outer 1 22 23.6 ± 1.1 5 ± 0 -71.5
1.3.11.01. Esterase EstA 3kvn Pseudomonas aeruginosa Bact. Gram-neg outer 1 12 24.4 ± 1.5 4 ± 2 -48.7
1.3.16.01. Porin B (PorB) 3a2s Neisseria meningitidis Bact. Gram-neg outer 3 48 24.4 ± 1.0 0 ± 0 -102.1
1.3.11.01. Hemoglobin-binding protease Hbp autotransporter 3aeh Escherichia coli Bact. Gram-neg outer 1 12 25.2 ± 1.1 4 ± 0 -41.9
1.1.73.01. Outer membrane complex of type IV secretion system (VirB7/VirB9/VirB10 complex) 3jqo Escherichia coli Bact. Gram-neg outer 14 14 22.6 ± 0.6 0 ± 0 -67.4
1.1.73.01. TrbI protein 2bhv Helicobacter pylori Bact. Gram-neg outer 1 0 3.1 ± 1.3 42 ± 11 -6.4
1.3.12.01. Outer membrane phospholipase A, monomer 1qd5 Escherichia coli Bact. Gram-neg outer 1 12 24.6 ± 1.2 6 ± 0 -52.6
1.3.20.01. Outer membrane cobalamin transporter BtuB, with cyanocobalamin 3m8d Escherichia coli Bact. Gram-neg outer 1 22 23.3 ± 0.8 6 ± 1 -70.5
1.3.15.01. Outer membrane protein G (OMPG), open state 2 2x9k Escherichia coli Bact. Gram-neg outer 1 14 24.7 ± 1.2 5 ± 2 -62.7
1.3.03.01. Outer membrane protein OprG 2x27 Pseudomonas aeruginosa Bact. Gram-neg outer 1 8 23.9 ± 1.7 7 ± 3 -39.6
1.3.24.01. Cation efflux system protein CusC 3pik Escherichia coli Bact. Gram-neg outer 3 12 24.3 ± 1.2 1 ± 0 -33.8
1.3.11.01. Autotransporter BrkA 3qq2 Bordetella pertussis Bact. Gram-neg outer 1 12 24.6 ± 1.5 4 ± 1 -44.1
2.3.10.05. 3-Deoxy-D-manno-octulosonic-acid transferase, WaaA 2xci Aquifex aeolicus Bact. Gram-neg outer 1 0 8.3 ± 1.5 72 ± 1 -20.3
2.1.07.01. Decaheme cytochrome c MtrF 3pmq Shewanella oneidensis Bact. Gram-neg outer 1 0 3.9 ± 0.9 86 ± 2 -6.2
1.3.21.01. Outer membrane usher protein FimD 3ohn Escherichia coli Bact. Gram-neg outer 1 24 21.2 ± 1.1 5 ± 0 -45.4
1.3.21.01. Outer membrane usher protein FimD, complex with FimC-FimH 3rfz Escherichia coli Bact. Gram-neg outer 1 24 23.8 ± 0.8 5 ± 0 -65.1
1.3.16.01. Porin OmpF 3nsg Salmonella enterica Bact. Gram-neg outer 3 48 23.6 ± 0.8 0 ± 0 -123.4
2.2.23.01. Lipoprotein BamB, conformation 1 3prw Escherichia coli Bact. Gram-neg outer 1 0 5.1 ± 1.2 81 ± 7 -8.5
1.3.17.02. BamCD lipoprotein complex 3tgo Escherichia coli Bact. Gram-neg outer 2 0 3.7 ± 2.1 81 ± 20 -3.3
1.3.11.01. Serine protease EspP, pre-cleavage structure 3slj Escherichia coli Bact. Gram-neg outer 1 12 25.4 ± 1.2 6 ± 1 -53.1
2.2.45.01. Outer membrane protein IcsA autotransporter 3ml3 Shigella flexneri Bact. Gram-neg outer 1 0 3.4 ± 0.5 65 ± 2 -6.2
2.2.45.01. Pertactin, complex with phage tail protein 2iou Bordetella bronchiseptica Bact. Gram-neg outer 4 0 3.9 ± 1.2 82 ± 2 -8.2
2.2.45.01. Pertactin autotransporter 1dab Bordetella pertussis Bact. Gram-neg outer 1 0 2.6 ± 1.1 73 ± 6 -5.9
1.3.01.02. Attachment invasion locus protein 3qra Yersinia pestis Bact. Gram-neg outer 1 8 25.2 ± 1.4 14 ± 7 -32.2
1.3.01.02. Attachment invasion locus protein, complex with the heparin analogue 3qrc Yersinia pestis Bact. Gram-neg outer 1 8 24.6 ± 1.2 7 ± 5 -31.6
2.2.07.02. Factor H binding protein 1ys5 Neisseria meningitidis Bact. Gram-neg outer 1 0 3.5 ± 2.6 84 ± 5 -5.6
1.3.20.01. Enantio-pyochelin receptor FetA 3qlb Pseudomonas fluorescens Bact. Gram-neg outer 1 22 23.4 ± 0.8 7 ± 0 -75.3
1.3.19.01. Outer membrane porin OpdL 2y0h Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 23.0 ± 1.0 3 ± 0 -55.7
1.3.19.01. Pyroglutamate porin OpdO 2y0k Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 23.8 ± 1.2 1 ± 0 -55.8
1.3.19.01. Cis-aconitate porin OpdH 2y0l Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 21.4 ± 1.5 6 ± 1 -57.2
2.2.23.01. Lipoprotein BamB, conformation 2 3p1l Escherichia coli Bact. Gram-neg outer 1 0 3.6 ± 2.8 89 ± 10 -6.4
2.1.08.01. Quinohemoprotein alcohol dehydrogenase ADH IIB 1kv9 Pseudomonas putida Bact. Gram-neg outer 1 0 1.7 ± 1.1 77 ± 22 -5.9
2.2.21.04. Cytolethal distending toxin complex 1sr4 Haemophilus ducreyi Bact. Gram-neg outer 3 0 1.8 ± 1.5 34 ± 7 -5.0
1.3.19.03. MOMP porin 5ldv Campylobacter jejuni Bact. Gram-neg outer 3 54 25.4 ± 0.6 0 ± 0 -125.2
1.3.19.01. Histidine porin OpdC 3sy9 Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 23.4 ± 0.8 5 ± 0 -63.2
1.3.19.01. Glycine-glutamate dipeptide porin OpdP 3syb Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 23.6 ± 0.9 8 ± 0 -62.0
1.3.19.01. Porin OpdF 3szd Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 22.0 ± 1.6 3 ± 0 -60.3
1.3.19.01. Porin OpdQ 3t24 Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 23.0 ± 1.3 2 ± 0 -56.5
1.3.20.01. Transferrin-binding protein A, complex with human serotransferrin 3v89 Neisseria meningitidis Bact. Gram-neg outer 1 22 22.8 ± 0.8 3 ± 1 -68.9
1.3.20.01. Transferrin-binding protein A, complex with full-length transferrin 3v8x Neisseria meningitidis Bact. Gram-neg outer 1 22 23.2 ± 0.6 3 ± 0 -66.6
1.3.11.02. Intimin 4e1s Escherichia coli Bact. Gram-neg outer 1 12 24.4 ± 1.6 9 ± 2 -45.2
1.3.11.02. Invasin 4e1t Yersinia pseudotuberculosis Bact. Gram-neg outer 1 12 25.6 ± 1.4 9 ± 1 -51.0
1.3.20.01. Pesticin receptor FyuA 4epa Yersinia pestis Bact. Gram-neg outer 1 22 23.6 ± 0.8 3 ± 0 -73.5
1.3.16.01. Porin B (PorB) 4aui Neisseria gonorrhoeae Bact. Gram-neg outer 3 48 24.2 ± 0.8 0 ± 0 -89.7
1.3.16.04. Porin B 4gey Pseudomonas putida Bact. Gram-neg outer 1 16 24.2 ± 1.6 6 ± 2 -61.3
1.3.16.04. Porin B, low pH structure 4gf4 Pseudomonas putida Bact. Gram-neg outer 1 16 22.4 ± 1.1 5 ± 2 -54.3
1.3.23.01. Adhesin yadA 2lme Yersinia enterocolitica Bact. Gram-neg outer 3 15 23.4 ± 2.2 0 ± 1 -37.7
1.3.16.01. Osmoporin OMPC 3upg Salmonella typhimurium Bact. Gram-neg outer 3 48 23.4 ± 0.7 0 ± 0 -118.0
1.3.20.01. Fe-regulated protein B 4aip Neisseria meningitidis Bact. Gram-neg outer 3 66 23.4 ± 0.3 0 ± 0 -144.6
1.3.20.01. Fe-regulated protein B, different variant 4aiq Neisseria meningitidis Bact. Gram-neg outer 1 22 23.6 ± 0.9 6 ± 0 -69.7
1.3.19.02. Alginate export protein, AlgE, conformation 2 4afk Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 24.8 ± 0.9 3 ± 0 -73.0
2.2.50.01. Lipoprotein TP0453, open conformation 3k8i Treponema pallidum Bact. Gram-neg outer 1 0 8.9 ± 2.4 38 ± 2 -12.0
1.3.01.01. Outer membrane protein A (OMPA) 1bxw Escherichia coli Bact. Gram-neg outer 1 8 25.4 ± 1.9 5 ± 1 -35.6
1.3.04.03. Lipid A acylase PagP, different conformation of loops 1thq Escherichia coli Bact. Gram-neg outer 1 8 23.4 ± 2.5 27 ± 3 -31.3
1.3.08.01. Outer membrane adhesin/invasin OpcA, disordered loops 2vdf Neisseria meningitidis Bact. Gram-neg outer 1 10 24.8 ± 1.2 8 ± 0 -47.0
1.3.07.01. Plasminogen activator PLA (coagulase/fibrinolysin), disordered loop 2x4m Yersinia pestis Bact. Gram-neg outer 10 10 24.2 ± 1.6 2 ± 2 -46.1
1.3.14.01. Fatty Acid Transporter FadL, D348R, open channel 3pgr Escherichia coli Bact. Gram-neg outer 1 14 25.4 ± 1.4 3 ± 1 -50.8
1.3.14.01. Fatty Acid Transporter FadL, F3E, open channel 3pgu Escherichia coli Bact. Gram-neg outer 1 14 25.2 ± 1.5 1 ± 1 -51.5
1.3.14.01. Fatty Acid Transporter FadL, delS3, open channel 2r88 Escherichia coli Bact. Gram-neg outer 1 14 24.0 ± 1.4 6 ± 2 -53.8
1.3.24.01. Outer membrane protein TolC, mutant, open conformation 1 2wmz Escherichia coli Bact. Gram-neg outer 3 12 24.4 ± 0.8 0 ± 0 -52.8
1.3.24.01. Outer membrane protein TolC, mutant, open conformation 2 2vde Escherichia coli Bact. Gram-neg outer 3 12 24.4 ± 1.2 0 ± 0 -57.4
1.3.24.01. Outer membrane protein TolC, mutant, open conformation 3 2vdd Escherichia coli Bact. Gram-neg outer 3 12 24.4 ± 1.2 0 ± 0 -57.7
1.3.24.01. Outer membrane protein TolC, mutant, open conformation 4 2xmn Escherichia coli Bact. Gram-neg outer 3 12 23.6 ± 1.4 0 ± 0 -50.5
1.3.17.01. Filamentous hemagglutinin transporter FhaC, structure 1 3njt Bordetella pertussis Bact. Gram-neg outer 1 16 23.6 ± 0.9 7 ± 0 -65.8
1.3.19.01. Outer membrane porin OprD, different conformation of loops 3sy7 Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 23.8 ± 1.1 4 ± 2 -63.5
2.2.50.01. Lipoprotein TP0453, closed conformation 3k8g Treponema pallidum Bact. Gram-neg outer 1 0 6.9 ± 2.8 46 ± 7 -8.5
2.2.50.01. Lipoprotein TP0453, intermediate conformation 3k8j Treponema pallidum Bact. Gram-neg outer 1 0 5.4 ± 1.4 33 ± 6 -9.9
1.3.27.01. Capsule assembly protein Wzi 2ynk Escherichia coli Bact. Gram-neg outer 1 18 23.8 ± 1.3 6 ± 1 -58.2
1.3.10.01. Oligogalacturonate-specific porin KdgM 4fqe Dickeya dadantii Bact. Gram-neg outer 1 12 22.2 ± 1.5 2 ± 1 -42.1
1.3.06.02. Carbapenem-associated resistance porin CarO3 4fuv Acinetobacter baumannii Bact. Gram-neg outer 1 8 25.0 ± 2.3 3 ± 1 -38.5
1.3.19.02. Alginate export protein, AlgE, conformation 3 4b61 Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 24.0 ± 1.1 5 ± 1 -73.2
1.3.19.01. Porin OprdG 4ft6 Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 23.4 ± 1.4 4 ± 0 -62.4
1.3.19.01. Porin OprdD 4frt Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 20.4 ± 1.4 5 ± 1 -48.5
1.3.19.01. Porin OprE 4frx Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 22.0 ± 1.5 6 ± 0 -55.3
1.3.19.01. Porin OpdN 4fso Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 21.8 ± 2.2 7 ± 1 -61.3
1.3.19.01. Porin OpdR 4fsp Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 22.6 ± 1.2 3 ± 0 -59.6
1.3.17.02. Outer membrane protein assembly fact