PDB ID or protein name

All proteins in OPM (3404 proteins)

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Family Protein Name PDB ID Species Localization Num. Subunits Num. TM Sec. Structs. Hydrophobic Thickness or Depth (Å) Tilt Angle (°) ΔGtransfer (kcal/mol)
1.1.10.02. Molybdate transporter ModBC, open state 3d31 Methanosarcina acetivorans Archaebac. 2 12 29.8 ± 1.5 1 ± 0 -91.6
1.1.11.01. Protein translocase SecY, closed state, mutant 1rh5 Methanococcus jannaschii Archaebac. 3 12 29.0 ± 1.1 10 ± 0 -93.4
1.1.12.01. Potassium channel KvAP, sensor domain 1ors Aeropyrum pernix Archaebac. 1 5 31.5 ± 2.2 19 ± 1 -50.3
1.1.12.01. Potassium channel KvAP, complex with Fab 1orq Aeropyrum pernix Archaebac. 4 12 29.3 ± 1.6 0 ± 0 -78.6
1.1.01.01. Bacteriorhodopsin 1m0l Halobacterium salinarum Archaebac. 3 21 31.8 ± 1.1 0 ± 1 -121.1
1.1.01.01. Sensory rhodopsin II, tetramer, structure 1 1h2s Natronomonas pharaonis Archaebac. 4 18 30.5 ± 1.1 0 ± 0 -123.4
1.1.01.01. Halorhodopsin 1e12 Halobacterium salinarum Archaebac. 3 21 31.8 ± 1.4 0 ± 1 -126.7
1.1.01.01. Archaerhodopsin-1 1uaz Halobacterium sp. Archaebac. 1 7 31.8 ± 1.3 9 ± 2 -65.3
1.1.01.01. Bacteriorhodopsin, K state, with lipids 1iw6 Halobacterium salinarum Archaebac. 3 21 30.0 ± 0.6 0 ± 0 -112.6
1.1.01.01. Bacteriorhodopsin, trimer, complex with annular lipids 2zzl Halobacterium salinarum Archaebac. 3 21 29.8 ± 0.6 0 ± 0 -119.0
1.1.01.01. Sensory rhodopsin II, monomer 1h68 Natronomonas pharaonis Archaebac. 1 7 30.3 ± 1.5 15 ± 2 -60.0
1.1.01.01. Bacteriorhodopsin, monomer 1py6 Halobacterium salinarum Archaebac. 1 7 29.6 ± 2.2 24 ± 8 -59.7
1.1.17.01. Ammonium transporter Amt-1 2b2f Archaeoglobus fulgidus Archaebac. 3 33 28.9 ± 0.7 0 ± 0 -152.5
1.1.01.01. Archaerhodopsin-2, monomer 1vgo Halobacterium sp. Archaebac. 1 7 30.7 ± 1.3 18 ± 2 -73.1
1.1.12.01. Potassium channel KvAP 2a0l Aeropyrum pernix Archaebac. 4 12 29.5 ± 1.1 0 ± 0 -100.0
1.1.14.01. Aquaporin AqpM 2f2b Methanobacterium thermoautotrophicum Archaebac. 4 32 29.0 ± 0.8 0 ± 0 -129.9
1.1.11.01. Protein translocase SecY, complex with ribosome 2 3bo0 Methanococcus jannaschii Archaebac. 3 12 29.6 ± 1.2 6 ± 2 -78.0
1.1.57.01. Peptidase A24B, FlaK domain protein 3s0x Methanococcus maripaludis Archaebac. 1 6 31.8 ± 1.6 40 ± 2 -67.7
2.3.01.02. Beta-glycosidase 1vff Pyrococcus horikoshii Archaebac. 1 0 3.9 ± 1.6 39 ± 10 -9.7
1.1.38.01. H+-driven MATE exporter, outward-open, straight conformation 3wbn Pyrococcus furiosus Archaebac. 1 12 31.8 ± 1.4 8 ± 0 -88.2
1.1.38.01. H+-driven MATE exporter, outward-open, "bent" conformation 3vvo Pyrococcus furiosus Archaebac. 1 12 31.4 ± 1.1 11 ± 0 -93.1
1.1.38.01. H+-driven MATE exporter, outward-open, with nonpeptide inhibitor 3vvp Pyrococcus furiosus Archaebac. 1 12 29.8 ± 1.3 8 ± 0 -79.6
1.1.14.01. Aquaporin AqpM 3ne2 Archaeoglobus fulgidus Archaebac. 4 24 31.2 ± 1.3 0 ± 0 -143.5
1.1.09.01. Copper efflux ATPase, CopA 3j08 Archaeoglobus fulgidus Archaebac. 2 16 27.6 ± 0.8 0 ± 0 -72.3
1.1.10.02. Molybdate transporter ModBC, open state 2onk Archaeoglobus fulgidus Archaebac. 2 12 32.0 ± 1.7 0 ± 1 -100.7
1.1.59.01. Membrane protease specific for a stomatin homolog, monomer 3bpp Pyrococcus horikoshii Archaebac. 1 0 4.0 ± 0.4 82 ± 5 -6.3
1.1.32.01. Proton glutamate symport protein, outward-facing state 1 2nwl Pyrococcus horikoshii Archaebac. 3 39 29.8 ± 1.3 0 ± 0 -202.1
1.1.01.01. Bacteriorhodopsin, from cubic phase 1ap9 Halobacterium salinarum Archaebac. 3 21 30.6 ± 1.2 0 ± 0 -97.8
1.1.01.01. Archaerhodopsin-2, trimeric 2ei4 Halobacterium sp. Archaebac. 3 21 30.5 ± 1.2 0 ± 1 -143.9
1.1.58.01. Site-2 protease (S2P) metalloprotease 3b4r Methanococcus jannaschii Archaebac. 1 6 29.9 ± 1.4 23 ± 0 -65.0
1.1.26.05. Amino acid transporter ApcT, inward-facing conformation 3gia Methanococcus jannaschii Archaebac. 1 12 29.9 ± 1.4 11 ± 2 -92.1
1.1.32.01. Proton glutamate symport protein, inward-facing state 1 3kbc Pyrococcus horikoshii Archaebac. 3 30 28.1 ± 0.9 0 ± 1 -158.8
1.1.01.01. Halorhodopsin 3a7k Natronomonas pharaonis Archaebac. 3 21 33.8 ± 1.4 1 ± 0 -141.3
1.1.11.01. Protein translocase SecY, mutant with full-plug (TM2a) deletion 2yxr Methanococcus jannaschii Archaebac. 3 12 29.7 ± 0.8 4 ± 4 -95.6
1.1.12.01. Potassium channel KvAP, sensor domain, NMR model 2kyh Aeropyrum pernix Archaebac. 1 5 28.6 ± 1.4 19 ± 4 -44.6
1.1.12.01. Calcium-gated potassium channel MthK 3ldc Methanobacterium thermoautotrophicum Archaebac. 4 8 29.8 ± 0.8 0 ± 0 -72.4
1.1.11.01. Protein translocase SecY, partialy open 3mp7 Pyrococcus furiosus Archaebac. 2 10 30.1 ± 1.0 5 ± 6 -94.0
1.1.11.01. Protein translocase SecY, complex with ribosome 1 3dkn Methanococcus jannaschii Archaebac. 3 12 27.8 ± 1.8 2 ± 0 -80.9
2.3.06.12. Carboxylesterase (EstA) 1jji Archaeoglobus fulgidus Archaebac. 1 0 2.8 ± 1.0 56 ± 22 -4.8
2.4.05.01. Uncharacterized protein 3cnu Archaeoglobus fulgidus Archaebac. 1 0 7.6 ± 1.7 69 ± 20 -7.0
1.1.09.01. Copper efflux ATPase, CopA, alternative conformation 3j09 Archaeoglobus fulgidus Archaebac. 2 16 27.0 ± 0.1 1 ± 0 -23.5
1.1.53.01. Integral Membrane Methyltransferase 4a2n Methanosarcina acetivorans Archaebac. 1 5 30.6 ± 1.2 10 ± 2 -58.3
2.2.09.03. Surface layer protein 1l0q Methanosarcina mazei (Methanosarcina frisia) Archaebac. 1 0 3.1 ± 0.9 81 ± 7 -5.1
1.1.64.01. Sodium/calcium exchanger, structure 1 3v5u Methanococcus jannaschii Archaebac. 1 10 29.8 ± 0.9 3 ± 0 -78.4
1.1.59.01. Membrane protease specific for a stomatin homolog, dimer 3viv Pyrococcus horikoshii Archaebac. 2 0 4.5 ± 0.4 88 ± 9 -9.5
1.1.21.01. Magnesium transport protein CorA 4ev6 Methanococcus jannaschii Archaebac. 5 10 28.4 ± 1.5 0 ± 1 -92.4
1.1.57.02. Intramembrane aspartate protease 4hyg Methanoculleus marisnigri Archaebac. 3 27 31.8 ± 0.3 0 ± 0 -172.7
1.1.01.01. Bacteriorhodopsin, different loop conformaton 1fbk Halobacterium salinarum Archaebac. 3 21 30.0 ± 1.2 0 ± 0 -127.8
1.1.11.01. Protein translocase SecY, mutant with half-plug (TM2a) deletion 2yxq Methanococcus jannaschii Archaebac. 3 12 29.2 ± 1.1 6 ± 0 -89.1
1.1.11.01. Protein translocase SecY, closed state 1rhz Methanococcus jannaschii Archaebac. 3 12 29.4 ± 1.0 5 ± 0 -89.2
1.1.32.01. Proton glutamate symport protein, outward-facing state 2 2nww Pyrococcus horikoshii Archaebac. 3 36 30.6 ± 0.6 0 ± 0 -200.2
1.1.32.01. Proton glutamate symport protein, mixed inward/outward trimer 3v8g Pyrococcus horikoshii Archaebac. 3 30 29.8 ± 1.0 5 ± 0 -169.4
1.1.64.01. Sodium/calcium exchanger, structure 2 3v5s Methanococcus jannaschii Archaebac. 1 10 29.6 ± 1.6 1 ± 2 -75.1
1.1.01.01. Deltarhodopsin 4fbz Haloterrigena thermotolerans Archaebac. 3 21 31.6 ± 0.8 0 ± 0 -110.6
1.1.01.01. Halorhodopsin, different conformation 3vvk Natronomonas pharaonis Archaebac. 3 21 33.6 ± 1.1 0 ± 0 -140.5
1.1.64.01. H+/Ca2+ exchanger 4kpp Archaeoglobus fulgidus Archaebac. 1 12 29.8 ± 1.4 5 ± 0 -92.3
1.1.32.01. Proton/glutamate symporter, apo 5dwy Pyrococcus kodakaraensis Archaebac. 3 24 30.8 ± 0.6 0 ± 0 -184.1
1.1.38.01. H+-driven MATE exporter, outward-open, different conformation 4mlb Pyrococcus furiosus Archaebac. 1 12 30.2 ± 1.2 5 ± 0 -88.1
1.1.11.01. Protein translocase SecY, complex with ribosome 3 1vvk Methanococcus jannaschii Archaebac. 3 12 28.6 ± 0.7 10 ± 0 -90.3
1.1.52.01. Transmembrane oligosaccharyl transferase 3wak Archaeoglobus fulgidus Archaebac. 1 13 29.8 ± 0.6 12 ± 0 -100.8
1.1.82.01. 4-hydroxybenzoate octaprenyltransferase 4od5 Aeropyrum pernix Archaebac. 1 9 29.8 ± 0.9 14 ± 1 -63.9
1.1.01.01. Cruxrhodopsin-3 4jr8 Haloarcula vallismortis Archaebac. 3 21 31.8 ± 1.2 0 ± 0 -130.4
1.1.84.01. CDP-alcohol phosphatidyltransferase 4o6m Archaeoglobus fulgidus Archaebac. 2 12 30.0 ± 1.3 3 ± 1 -96.6
1.1.32.01. Proton glutamate symport protein, inward-facing state 2 4p19 Pyrococcus horikoshii Archaebac. 3 30 30.6 ± 1.0 0 ± 0 -172.9
1.1.32.01. Proton glutamate symport protein, outward-facing state 3 5cfy Pyrococcus horikoshii Archaebac. 3 33 29.8 ± 0.3 0 ± 0 -185.9
1.1.84.01. Bifunctional IPC transferase and DIPP synthase 4mnd Archaeoglobus fulgidus Archaebac. 2 12 30.2 ± 1.0 0 ± 0 -86.4
1.1.82.01. Bacteriochlorophyll synthase 4tq4 Archaeoglobus fulgidus Archaebac. 1 9 29.2 ± 1.5 14 ± 1 -73.5
1.1.32.01. Proton glutamate symport protein, outward-facing state 4 4oye Pyrococcus horikoshii Archaebac. 3 30 28.2 ± 0.6 0 ± 0 -168.8
2.4.06.05. Thermoacidophile-specific fatty acid carrier 3w9k Sulfolobus tokodaii Archaebac. 1 0 2.7 ± 1.4 47 ± 4 -7.1
1.1.35.02. Na+/H+ antiporter 1, inward-open conformation 4czb Methanococcus jannaschii Archaebac. 26 26 27.2 ± 0.5 1 ± 0 -128.3
1.1.35.02. Na+/H+ antiporter 1, outward-open conformation 4d0a Methanococcus jannaschii Archaebac. 2 26 28.4 ± 1.0 0 ± 0 -155.0
1.1.35.02. Na+/H+ antiporter, structure 1 4cz8 Pyrococcus abyssi Archaebac. 2 26 29.8 ± 0.9 2 ± 0 -118.2
1.1.35.02. Na+/H+ antiporter, structure 2 4cz9 Pyrococcus abyssi Archaebac. 2 26 27.2 ± 0.8 1 ± 0 -116.9
1.1.01.01. Bacteriorhodopsin-I 4pxk Haloarcula marismortui Archaebac. 1 7 31.8 ± 1.4 11 ± 1 -72.7
1.1.32.01. Proton glutamate symport protein, inward-facing state 3 4x2s Pyrococcus horikoshii Archaebac. 3 30 27.0 ± 0.7 10 ± 0 -105.3
1.1.01.01. Bacteriorhodopsin-I 4qi1 Haloquadratum walsbyi Archaebac. 3 21 31.8 ± 1.2 0 ± 0 -129.9
1.1.18.01. Mechanosensitive channel MscL, expanded state 4y7j Methanosarcina acetivorans Archaebac. 5 10 26.8 ± 0.0 3 ± 0 -25.1
1.1.18.01. Mechanosensitive channel MscL, closed state 4y7k Methanosarcina acetivorans Archaebac. 5 10 31.8 ± 0.1 0 ± 0 -121.6
1.1.30.01. YidC-like protein 5c8j Methanococcus jannaschii Archaebac. 1 4 29.8 ± 1.4 42 ± 2 -42.1
1.1.01.01. Bacteriorhodopsin-I 4wav Haloquadratum walsbyi Archaebac. 1 7 30.0 ± 2.1 9 ± 3 -63.0
1.1.64.01. Sodium/calcium exchanger, structure 3 5hwy Methanococcus jannaschii Archaebac. 1 10 29.0 ± 1.7 2 ± 2 -63.7
1.1.101.01. Cytochrome C-type biogenesis protein (CcdA) 2n4x Archaeoglobus fulgidus Archaebac. 1 8 29.0 ± 2.0 10 ± 10 -38.7
1.2.12.02. Archaeal flagellin, single helix 3j1r Ignicoccus hospitalis Archaebac. 1 1 33.4 ± 4.4 22 ± 3 -29.6
1.2.12.02. Archaeal flagellin 5kyh Ignicoccus hospitalis Archaebac. 4 4 37.4 ± 2.0 18 ± 2 -75.0
1.1.32.01. Proton/glutamate symporter, substrate-bound 5e9s Pyrococcus kodakaraensis Archaebac. 3 24 31.4 ± 0.6 0 ± 0 -197.9
1.1.104.01. Trimeric intracellular cation channel 5h35 Sulfolobus solfataricus Archaebac. 3 21 27.4 ± 0.8 0 ± 0 -112.8
1.1.01.01. Sensory rhodopsin II, tetramer, structure 2 5jje Natronomonas pharaonis Archaebac. 4 18 30.2 ± 0.8 0 ± 0 -116.8
1.1.36.01. ClC chloride transporter 1ots Escherichia coli Bact. Gram-neg inner 2 28 29.7 ± 0.8 0 ± 0 -115.3
1.1.36.01. ClC chloride transporter 1kpl Salmonella enterica Bact. Gram-neg inner 2 28 29.3 ± 0.8 2 ± 1 -128.0
1.1.50.01. Particulate methane monooxygenase 1yew Methylococcus capsulatus Bact. Gram-neg inner 9 42 28.2 ± 0.7 0 ± 0 -188.5
1.1.19.01. Mechanosensitive channel protein MscS, expanded state 2oau Escherichia coli Bact. Gram-neg inner 7 14 31.8 ± 0.8 1 ± 1 -171.3
1.1.14.01. Aquaporin Z 1rc2 Escherichia coli Bact. Gram-neg inner 4 32 29.7 ± 1.3 0 ± 0 -118.7
1.1.14.01. Glycerol uptake facilitator 1ldf Escherichia coli Bact. Gram-neg inner 4 32 30.1 ± 0.9 0 ± 0 -147.9
1.1.17.01. Ammonia Channel 1u7g Escherichia coli Bact. Gram-neg inner 3 33 29.8 ± 1.3 0 ± 0 -148.7
1.1.25.02. Lactose permease lacY, structure at acidic pH 2cfp Escherichia coli Bact. Gram-neg inner 1 12 31.1 ± 1.4 2 ± 2 -85.4
1.1.25.01. Glycerol-3-phosphate transporter glpT 1pw4 Escherichia coli Bact. Gram-neg inner 1 12 31.2 ± 1.4 1 ± 7 -92.5
1.1.10.01. ABC transporter BtuCD, symmetric structure 1l7v Escherichia coli Bact. Gram-neg inner 2 22 30.7 ± 1.1 0 ± 1 -121.0
1.1.02.05. Light-harvesting complex LH2 1nkz Rhodopseudomonas acidophila Bact. Gram-neg inner 18 18 31.8 ± 0.6 0 ± 0 -193.5
1.1.02.05. Light-harvesting complex LH3 1ijd Rhodopseudomonas acidophila Bact. Gram-neg inner 18 18 29.8 ± 0.7 0 ± 0 -174.6
1.1.02.05. Light-harvesting complex 1lgh Rhodospirillum molischianum Bact. Gram-neg inner 16 16 29.7 ± 0.5 0 ± 0 -163.4
1.1.02.01. Photosynthetic reaction center, complex with cytochrome c 1eys Thermochromatium tepidum Bact. Gram-neg inner 3 11 31.6 ± 1.0 2 ± 0 -116.0
1.1.02.01. Photosynthetic reaction center, complex with cytochrome c 1l9b Rhodobacter sphaeroides Bact. Gram-neg inner 3 11 31.6 ± 0.8 3 ± 0 -127.3
1.1.02.01. Photosynthetic reaction center, complex with cytochrome c 1dxr Rhodopseudomonas viridis Bact. Gram-neg inner 3 11 31.8 ± 0.7 5 ± 0 -121.8
1.1.07.01. Bacterial cytochrome c oxidase 1m56 Rhodobacter sphaeroides Bact. Gram-neg inner 4 22 29.6 ± 1.8 3 ± 0 -173.7
1.1.07.01. Bacterial cytochrome c oxidase 1qle Paracoccus denitrificans Bact. Gram-neg inner 4 22 31.7 ± 1.3 4 ± 0 -167.4
1.1.07.01. Ubiquinol Oxidase 1fft Escherichia coli Bact. Gram-neg inner 3 19 29.5 ± 0.6 12 ± 0 -82.3
1.1.05.02. Formate dehydrogenase 1kqf Escherichia coli Bact. Gram-neg inner 6 15 33.7 ± 1.1 0 ± 0 -141.9
1.1.05.03. Respiratory Nitrate Reductase 1q16 Escherichia coli Bact. Gram-neg inner 2 10 30.1 ± 0.9 0 ± 0 -126.9
1.1.05.05. Fumarate reductase 1kf6 Escherichia coli Bact. Gram-neg inner 2 6 30.2 ± 1.2 14 ± 2 -65.6
1.1.05.05. Succinate dehydrogenase 1nek Escherichia coli Bact. Gram-neg inner 6 18 32.0 ± 0.6 0 ± 0 -183.5
1.1.12.02. Potassium channel Kirbac1.1, closed state 1p7b Burkholderia pseudomallei Bact. Gram-neg inner 4 8 33.1 ± 1.3 0 ± 0 -111.9
1.1.01.01. Sensory rhodopsin, monomer 1xio Nostoc sp. Bact. Gram-neg inner 1 7 31.9 ± 1.5 13 ± 4 -63.1
1.1.05.01. Polysulfide reductase, inactive state 2vpz Thermus thermophilus Bact. Gram-neg inner 2 16 29.8 ± 1.5 1 ± 0 -105.2
1.1.08.01. F1F0 ATP synthase subunit c 1a91 Escherichia coli Bact. Gram-neg inner 1 2 28.4 ± 8.0 44 ± 4 -24.2
1.1.08.01. F1F0 ATP synthase, F0 complex 1c17 Escherichia coli Bact. Gram-neg inner 13 28 34.6 ± 1.2 4 ± 0 -149.9
1.1.08.01. F-type Sodium ATPase 1yce Ilyobacter tartaricus Bact. Gram-neg inner 11 22 37.0 ± 0.5 0 ± 0 -104.0
1.1.26.05. Arginine/agmatine transporter (AdiC), substrate-bound 3l1l Escherichia coli Bact. Gram-neg inner 2 24 28.8 ± 1.4 2 ± 2 -132.0
1.1.35.01. Sodium/proton antiporter 1 (NhaA) 1zcd Escherichia coli Bact. Gram-neg inner 1 14 28.4 ± 1.4 2 ± 2 -78.6
1.1.26.01. Leucine transporter LeuT, outward-facing substrate-bound conformation 2a65 Aquifex aeolicus Bact. Gram-neg inner 2 28 29.8 ± 0.5 0 ± 0 -157.9
1.1.21.01. CorA magnesium transporter, structure 1 2bbj Thermotoga maritima Bact. Gram-neg inner 5 10 29.9 ± 1.0 0 ± 0 -80.8
1.2.12.01. Fimbrial protein, type IV pilin, monomer 2pil Neisseria gonorrhoeae Bact. Gram-neg inner 1 1 30.8 ± 5.7 21 ± 5 -24.9
1.1.05.04. Fumarate reductase 2bs2 Wolinella succinogenes Bact. Gram-neg inner 2 10 31.4 ± 1.3 2 ± 0 -118.8
2.1.08.01. Cytochrome c552 1a8c Nitrosomonas europaea Bact. Gram-neg inner 1 0 2.7 ± 1.0 80 ± 11 -4.7
2.1.08.01. Cytochrome c2 1co6 Rhodopseudomonas viridis Bact. Gram-neg inner 1 0 1.4 ± 0.7 78 ± 10 -3.3
2.1.08.01. Mono-heme c-type cytochrome ScyA 1kx7 Shewanella putrefaciens Bact. Gram-neg inner 1 0 1.8 ± 1.1 72 ± 12 -3.2
2.1.08.01. Cytochrome c551 1cor Pseudomonas stutzeri Bact. Gram-neg inner 1 0 2.6 ± 1.1 73 ± 12 -6.1
2.1.08.01. Cytochrome c551 451c Pseudomonas aeruginosa Bact. Gram-neg inner 1 0 1.4 ± 0.9 85 ± 10 -5.4
2.1.08.02. Cytochrome c4 1m70 Pseudomonas stutzeri Bact. Gram-neg inner 1 0 5.4 ± 0.8 67 ± 14 -5.6
2.1.05.02. Farnesyl diphosphate synthase (Geranyltranstransferase) 1rqj Escherichia coli Bact. Gram-neg inner 1 0 3.3 ± 0.7 87 ± 3 -7.7
2.2.05.01. Amicyanin 1sfd Paracoccus denitrificans Bact. Gram-neg inner 1 0 3.5 ± 0.8 49 ± 10 -4.0
2.2.05.01. Amicyanin 1id2 Paracoccus versutus Bact. Gram-neg inner 1 0 4.2 ± 1.3 52 ± 8 -4.9
2.2.05.01. Pseudoazurin 1pmy Methylobacterium extorquens Bact. Gram-neg inner 1 0 1.6 ± 1.4 45 ± 13 -4.3
2.2.05.01. Azurin I 1rkr Alcaligenes xylosoxidans Bact. Gram-neg inner 1 0 1.0 ± 1.0 43 ± 7 -4.3
2.2.05.01. Azurin iso-2 1cuo Methylomonas sp. Bact. Gram-neg inner 1 0 1.4 ± 1.6 69 ± 15 -4.3
1.1.09.01. Copper efflux ATPase 3rfu Legionella pneumophila Bact. Gram-neg inner 1 8 30.0 ± 0.4 16 ± 1 -72.1
2.2.07.01. Polyisoprenoid-binding protein 1wub Thermus thermophilus Bact. Gram-neg inner 1 0 2.9 ± 1.9 42 ± 13 -4.4
2.2.04.01. Lignostilbene-alpha,beta-dioxygenase (retinal-forming oxygenase) 2biw Synechocystis sp. Bact. Gram-neg inner 1 0 6.1 ± 0.9 39 ± 9 -12.9
1.1.26.06. Uracil transporter UraA 3qe7 Escherichia coli Bact. Gram-neg inner 1 14 27.7 ± 1.2 16 ± 0 -79.3
2.2.10.01. High potential iron protein 1hpi Ectothiorhodospira vacuolata Bact. Gram-neg inner 1 0 2.7 ± 1.0 89 ± 12 -4.4
1.1.28.02. Efflux transporter CusA, apo-protein 3k07 Escherichia coli Bact. Gram-neg inner 3 33 27.4 ± 1.2 0 ± 0 -166.7
1.1.28.02. Efflux transporter CusA, Cu(i) complex 3kss Escherichia coli Bact. Gram-neg inner 3 33 28.8 ± 0.5 0 ± 0 -147.7
2.3.15.01. Electron transfer flavoprotein 1efp Paracoccus denitrificans Bact. Gram-neg inner 2 0 4.3 ± 1.1 90 ± 13 -4.8
2.3.16.01. Shikimate kinase 1e6c Erwinia chrysanthemi Bact. Gram-neg inner 2 0 2.6 ± 1.8 90 ± 12 -5.8
2.3.16.01. Shikimate kinase 1via Campylobacter jejuni Bact. Gram-neg inner 2 0 3.9 ± 1.4 89 ± 11 -5.0
2.3.10.01. Peptidoglycan biosynthesis glycosyltransferase MurG, conformation 2 1f0k Escherichia coli Bact. Gram-neg inner 1 0 5.3 ± 1.2 55 ± 7 -8.6
1.1.08.01. ATP synthase subunit b, peptide 1-33 1b9u Escherichia coli Bact. Gram-neg inner 1 1 29.8 ± 4.0 41 ± 2 -23.1
2.3.10.01. Peptidoglycan biosynthesis glycosyltransferase MurG, conformation 1 1nlm Escherichia coli Bact. Gram-neg inner 1 0 4.8 ± 1.1 50 ± 7 -7.5
1.1.25.02. Lactose permease LacY, structure 1 2cfq Escherichia coli Bact. Gram-neg inner 1 12 31.9 ± 1.1 5 ± 1 -87.9
1.1.25.05. Di- or tripeptide transporter 4w6v Yersinia enterocolitica Bact. Gram-neg inner 1 14 29.8 ± 1.2 12 ± 1 -113.6
1.1.63.01. Type 1 signal peptidase, complex with lipopeptide inhibitor 1t7d Escherichia coli Bact. Gram-neg inner 1 0 3.9 ± 1.0 65 ± 11 -7.6
1.1.63.01. Type 1 signal peptidase, complex with inhibitor 1b12 Escherichia coli Bact. Gram-neg inner 1 0 5.4 ± 1.8 88 ± 7 -5.1
1.1.63.01. Type 1 signal peptidase, apo-enzyme 1kn9 Escherichia coli Bact. Gram-neg inner 1 0 3.4 ± 1.4 80 ± 6 -7.8
1.1.04.01. Respiratory complex I 3rko Escherichia coli Bact. Gram-neg inner 6 58 29.6 ± 0.0 9 ± 0 -236.7
2.3.05.02. Sulfide-quinone reductase 3sx6 Acidithiobacillus ferrooxidans Bact. Gram-neg inner 1 0 10.6 ± 0.6 70 ± 8 -7.3
3.1.02.11. Methyl-accepting chemotaxis protein II 2l9g Escherichia coli Bact. Gram-neg inner 1 0 8.1 ± 4.2 75 ± 0 -11.7
1.1.25.03. Multidrug transporter EmrD 2gfp Escherichia coli Bact. Gram-neg inner 1 12 31.6 ± 1.5 9 ± 0 -58.0
2.1.08.01. Cytochrome c2 1cxa Rhodobacter sphaeroides Bact. Gram-neg inner 1 0 2.0 ± 1.2 88 ± 13 -4.3
1.1.28.01. Multidrug efflux transporter AcrB, asymmetric 2gif Escherichia coli Bact. Gram-neg inner 3 36 29.0 ± 0.2 1 ± 0 -187.5
1.1.10.02. Maltose transporter MalFGK, outward conformation 3puw Escherichia coli Bact. Gram-neg inner 2 14 29.8 ± 1.3 3 ± 1 -94.0
1.1.60.01. Protease GlpG 2nr9 Haemophilus influenzae Bact. Gram-neg inner 1 6 28.2 ± 1.6 13 ± 3 -52.0
1.1.15.02. Proton-gated ion channel, inactive conformation 3 3rqw Erwinia chrysanthemi Bact. Gram-neg inner 5 20 29.8 ± 0.4 0 ± 0 -118.8
2.4.05.01. Sterol carrier protein 2 2cx7 Thermus thermophilus Bact. Gram-neg inner 1 0 4.7 ± 1.3 73 ± 13 -6.9
1.1.44.01. DsbB - DsbA complex, conformation 1 2hi7 Escherichia coli Bact. Gram-neg inner 1 4 24.3 ± 3.0 30 ± 0 -34.9
1.2.31.01. Cytochrome c nitrite reductase complex 2j7a Desulfovibrio vulgaris Bact. Gram-neg inner 2 2 31.8 ± 3.1 0 ± 2 -42.9
1.1.10.01. ABC transporter permease HI1471 2nq2 Haemophilus influenzae Bact. Gram-neg inner 2 20 31.9 ± 0.9 1 ± 1 -124.2
1.1.41.01. Magnesium ion transporter-E (MgtE), structure 1 2yvx Thermus thermophilus Bact. Gram-neg inner 2 10 31.1 ± 0.9 0 ± 0 -69.2
1.1.27.01. Ferrous-iron efflux pump fieF, different conformation 2qfi Escherichia coli Bact. Gram-neg inner 2 12 25.0 ± 1.3 1 ± 2 -32.4
1.1.10.03. Lipid flippase MsbA, open state 3b60 Salmonella enterica Bact. Gram-neg inner 2 12 31.8 ± 0.9 0 ± 0 -98.5
1.1.28.01. Multidrug efflux transporter AcrB, asymmetric, complex with ankyrin repeat 1 4dx5 Escherichia coli Bact. Gram-neg inner 3 36 27.4 ± 0.7 1 ± 0 -181.0
1.1.12.01. Bacterial cyclic nucleotide regulated ion channel 3beh Rhizobium loti Bact. Gram-neg inner 4 24 30.6 ± 0.8 0 ± 0 -205.7
1.1.15.02. Proton-gated ion channel, inactive conformation 1 2vl0 Erwinia chrysanthemi Bact. Gram-neg inner 5 20 31.8 ± 1.3 0 ± 0 -107.6
1.1.50.01. Particulate methane monooxygenase 3chx Methylosinus trichosporium Bact. Gram-neg inner 10 30 29.8 ± 0.4 0 ± 0 -152.0
1.1.19.01. Mechanosensitive channel protein MscS, open state 5aji Escherichia coli Bact. Gram-neg inner 7 21 29.8 ± 1.7 0 ± 0 -127.8
1.1.25.02. Lactose permease LacY, structure 5 4oaa Escherichia coli Bact. Gram-neg inner 1 12 32.6 ± 1.6 2 ± 2 -101.7
1.1.11.01. Protein translocase SecY, complex with SecA 3din Thermotoga maritima Bact. Gram-neg inner 3 13 26.9 ± 0.1 5 ± 0 -63.3
1.1.44.01. Disulfide bond formation protein B, conformation 1 2k74 Escherichia coli Bact. Gram-neg inner 1 4 29.7 ± 2.4 26 ± 1 -50.2
1.1.11.01. Protein translocase SecY, pre-open state 2zjs Thermus thermophilus Bact. Gram-neg inner 2 11 30.7 ± 1.2 7 ± 0 -100.7
1.1.01.01. Xanthorhodopsin 3ddl Salinibacter ruber Bact. Gram-neg inner 1 7 28.2 ± 1.8 11 ± 0 -60.7
1.1.15.02. Proton-gated ion channel, open state 3eam Gloeobacter violaceus Bact. Gram-neg inner 5 20 32.7 ± 0.9 0 ± 1 -183.4
1.1.12.03. TrkH/TrkA potassium transport complex 4j9u Vibrio parahaemolyticus Bact. Gram-neg inner 2 20 29.4 ± 0.7 0 ± 0 -151.9
1.1.26.03. Sodium/sugar symporter vSGLT, substrate-bound 3dh4 Vibrio parahaemolyticus Bact. Gram-neg inner 2 30 30.0 ± 0.7 0 ± 0 -184.0
1.1.10.01. ABC transporter BtuCD, complex with BtuF, structure 1 2qi9 Escherichia coli Bact. Gram-neg inner 2 22 29.4 ± 0.9 4 ± 4 -123.5
1.1.10.02. Methionine importer MetNI, conformation 1 3tui Escherichia coli Bact. Gram-neg inner 2 10 30.2 ± 1.3 1 ± 1 -81.0
1.1.12.02. Kir3.1-prokaryotic Kir channel chimera 2qks Burkholderia xenovorans Bact. Gram-neg inner 4 8 30.5 ± 1.4 0 ± 1 -88.6
1.1.28.01. Multidrug efflux transporter AcrB with YajC subunit , symmetric 2rdd Escherichia coli Bact. Gram-neg inner 6 39 28.4 ± 0.5 0 ± 0 -156.2
1.1.44.01. DsbB - DsbA complex, conformation 2 2zup Escherichia coli Bact. Gram-neg inner 1 4 24.2 ± 2.9 3 ± 8 -18.3
1.1.44.01. Disulfide bond formation protein B, conformation 3 2zuq Escherichia coli Bact. Gram-neg inner 1 4 27.9 ± 3.1 27 ± 1 -36.6
2.3.05.03. Glycerol-3-phosphate dehydrogenase (GlpD) 2qcu Escherichia coli Bact. Gram-neg inner 1 0 4.5 ± 1.5 74 ± 11 -8.4
2.3.14.02. Uncharacterized protein 2q3l Shewanella loihica Bact. Gram-neg inner 1 0 6.0 ± 0.5 64 ± 4 -12.6
1.1.28.01. Multidrug exporter MexB 2v50 Pseudomonas aeruginosa Bact. Gram-neg inner 3 36 28.6 ± 1.0 0 ± 1 -167.3
1.2.38.01. Penicillin-binding protein 1A 2oqo Aquifex aeolicus Bact. Gram-neg inner 1 0 3.0 ± 1.0 40 ± 6 -11.0
1.2.38.01. Penicillin-binding protein 1B 5hlb Escherichia coli Bact. Gram-neg inner 1 1 30.0 ± 2.0 33 ± 1 -21.7
1.1.26.05. Arginine/agmatine antiporter (AdiC), outward-facing structure 1 3h5m Escherichia coli Bact. Gram-neg inner 2 26 29.0 ± 0.8 0 ± 0 -128.9
2.3.05.02. Sulfide-quinone reductase 3h28 Aquifex aeolicus Bact. Gram-neg inner 3 0 2.4 ± 0.1 90 ± 0 -19.4
1.1.49.01. ATP-dependent zinc metalloprotease FtsH 3kds Thermotoga maritima Bact. Gram-neg inner 6 0 2.2 ± 0.4 90 ± 0 -12.8
1.1.54.01. Diacylglycerol kinase (DAGK), NMR model 2kdc Escherichia coli Bact. Gram-neg inner 3 9 25.5 ± 1.8 0 ± 0 -39.9
1.1.26.05. Arginine/agmatine antiporter (AdiC), outward-facing conformation 3hqk Salmonella enterica Bact. Gram-neg inner 2 26 29.8 ± 1.0 0 ± 0 -124.6
2.3.10.02. Beta-1,2-glucuronosyltrnansferase GumK 2q6v Xanthomonas campestris Bact. Gram-neg inner 1 0 5.2 ± 1.0 61 ± 8 -9.5
2.3.10.03. Heptosyltransferase WaaC 2h1h Escherichia coli Bact. Gram-neg inner 1 0 5.0 ± 1.1 67 ± 5 -9.1
2.3.10.03. LPS heptosyltransferase II, WaaF 1psw Escherichia coli Bact. Gram-neg inner 1 0 3.1 ± 1.1 58 ± 8 -5.6
1.1.30.01. Membrane protein insertase YidC, periplasmic domain 3blc Escherichia coli Bact. Gram-neg inner 1 0 6.6 ± 0.5 40 ± 11 -7.0
2.1.31.01. Colicin-M 3da4 Escherichia coli Bact. Gram-neg inner 1 0 2.5 ± 0.9 49 ± 11 -5.5
1.1.17.01. Rh-like protein 3b9y Nitrosomonas europaea Bact. Gram-neg inner 3 33 29.8 ± 1.3 0 ± 0 -150.1
1.1.27.01. Ferrous-iron efflux pump fieF 3h90 Escherichia coli Bact. Gram-neg inner 2 12 29.6 ± 0.8 0 ± 2 -83.9
2.3.20.01. Hydrophilic domain of respiratory complex I 3i9v Thermus thermophilus Bact. Gram-neg inner 8 0 5.1 ± 1.4 34 ± 10 -11.6
1.1.02.01. Photosynthetic reaction center 2j8c Rhodobacter sphaeroides Bact. Gram-neg inner 3 11 31.8 ± 0.8 2 ± 0 -129.6
2.3.16.04. Dynamin-like protein 2j69 Nostoc punctiforme Bact. Gram-neg inner 1 0 4.0 ± 7.0 15 ± 10 -5.5
1.1.14.02. Formate transporter 1, FocA 3kly Vibrio cholerae Bact. Gram-neg inner 5 35 31.4 ± 0.5 1 ± 0 -188.2
1.1.14.02. Formate transporter 1, FocA 3kcu Escherichia coli Bact. Gram-neg inner 5 35 29.9 ± 0.7 0 ± 0 -160.9
1.1.17.02. Urea transporter 3k3f Desulfovibrio vulgaris Bact. Gram-neg inner 3 30 29.4 ± 0.8 0 ± 0 -124.4
1.1.10.02. Maltose transporter MalFGK, inward conformation, TMH 1 deleted 3fh6 Escherichia coli Bact. Gram-neg inner 2 13 29.9 ± 0.6 3 ± 1 -97.8
1.1.17.01. Ammonia channel, complex with inhibitory GlnK 2ns1 Escherichia coli Bact. Gram-neg inner 3 33 29.1 ± 0.7 0 ± 0 -148.7
1.1.06.01. Cytochrome bc1, bacterial 1zrt Rhodobacter capsulatus Bact. Gram-neg inner 6 20 29.9 ± 0.9 0 ± 0 -178.6
1.1.51.01. Vitamin K epoxide reductase, conformation 1 4nv6 Synechococcus sp. Bact. Gram-neg inner 1 5 29.8 ± 1.8 1 ± 1 -54.2
1.1.14.01. Aquaporin Z2 3llq Agrobacterium tumefaciens Bact. Gram-neg inner 4 32 29.8 ± 0.6 0 ± 0 -134.5
1.1.47.01. Sensor protein kdpD 2ksf Escherichia coli Bact. Gram-neg inner 1 4 26.2 ± 4.0 45 ± 1 -27.9
1.1.47.01. Aerobic respiration control sensor protein acrB 2ksd Escherichia coli Bact. Gram-neg inner 1 2 27.9 ± 2.8 9 ± 1 -33.6
1.1.47.01. Sensor protein qseC 2kse Escherichia coli Bact. Gram-neg inner 1 2 31.3 ± 2.5 19 ± 0 -35.7
1.1.26.04. L-carnitine/gamma-butyrobetaine antiporter CaiT, substrate-bound 3hfx Escherichia coli Bact. Gram-neg inner 3 42 29.8 ± 0.8 0 ± 0 -203.5
1.1.90.01. Phosphatidate cytidylyltransferase, conformation 1 4q2e Thermotoga maritima Bact. Gram-neg inner 2 18 29.8 ± 0.6 1 ± 0 -77.7
1.1.12.02. Potassium channel Kirbac1.1, closed state, refined 2wll Burkholderia pseudomallei Bact. Gram-neg inner 4 8 33.4 ± 2.4 0 ± 0 -109.1
1.1.12.02. Potassium channel Kirbac3.1, closed conformation 2wlk Magnetospirillum magnetotacticum Bact. Gram-neg inner 4 8 29.8 ± 2.4 0 ± 0 -78.7
1.1.31.01. Tellurite resistance protein tehA homolog 3m73 Haemophilus influenzae Bact. Gram-neg inner 3 30 29.1 ± 1.4 0 ± 0 -157.4
1.1.46.01. MerF bacterial mercury uptake transporter, structure 1 2lj2 Morganella morganii Bact. Gram-neg inner 1 2 28.8 ± 2.4 19 ± 1 -37.9
1.1.02.01. Photosynthetic reaction center, more complete structure 2j8d Rhodobacter sphaeroides Bact. Gram-neg inner 3 11 31.6 ± 1.0 5 ± 0 -135.5
1.1.07.01. Bacterial cytochrome c oxidase, cbb3 type 3mk7 Pseudomonas stutzeri Bact. Gram-neg inner 4 17 32.8 ± 1.2 4 ± 4 -119.2
1.1.25.04. L-fucose-proton symporter fucP 3o7q Escherichia coli Bact. Gram-neg inner 1 12 30.7 ± 1.3 6 ± 0 -85.3
1.1.26.04. L-carnitine/gamma-butyrobetaine antiporter CaiT, open inward-facing conformation 2wsx Escherichia coli Bact. Gram-neg inner 3 42 28.6 ± 0.7 7 ± 0 -212.7
1.1.26.04. L-carnitine/gamma-butyrobetaine antiporter CaiT, open inward-facing conformation 2wsw Proteus mirabilis Bact. Gram-neg inner 3 42 29.8 ± 0.5 0 ± 0 -218.9
1.1.60.01. Protease GlpG, complex with inhibitor, conformation 1 2xow Escherichia coli Bact. Gram-neg inner 1 6 29.0 ± 1.7 15 ± 2 -59.0
1.1.38.01. Na+/drug antiporter NorM, outward-open 3mkt Vibrio cholerae Bact. Gram-neg inner 1 12 29.8 ± 1.1 9 ± 0 -74.0
1.1.36.01. ClC chloride transporter 3nd0 Synechocystis sp. Bact. Gram-neg inner 2 28 29.8 ± 0.7 0 ± 1 -120.9
1.1.26.03. Sodium/sugar symporter vSGLT, substrate-free 2xq2 Vibrio parahaemolyticus Bact. Gram-neg inner 2 30 30.4 ± 0.6 0 ± 0 -162.7
1.1.07.01. Nitric oxide reductase 3o0r Pseudomonas aeruginosa Bact. Gram-neg inner 2 13 31.7 ± 1.6 5 ± 0 -107.7
1.1.25.05. Glutathione uptake transporter, structure 1 2xut Shewanella oneidensis Bact. Gram-neg inner 1 14 30.9 ± 1.4 10 ± 0 -102.5
1.1.26.05. Arginine/agmatine transporter (AdiC), intermediate conformation 3ob6 Escherichia coli Bact. Gram-neg inner 2 24 29.8 ± 1.4 3 ± 1 -158.7
1.1.12.03. Potassium uptake protein TrkH 3pjz Vibrio parahaemolyticus Bact. Gram-neg inner 2 20 29.7 ± 0.6 1 ± 0 -164.0
1.1.02.05. Light-harvesting complex LH1, alpha chain 1xrd Rhodospirillum rubrum Bact. Gram-neg inner 1 1 30.3 ± 3.1 30 ± 4 -30.5
1.1.28.02. Efflux transporter CusA, complex with CusB 3ne5 Escherichia coli Bact. Gram-neg inner 3 36 29.0 ± 0.7 0 ± 0 -165.0
3.1.03.03. Membrane-bound helix of phosphotransferase IIA component 1o53 Escherichia coli Bact. Gram-neg inner 1 0 3.3 ± 1.3 86 ± 15 -7.8
2.3.06.05. Carboxylesterase 2 1auo Pseudomonas fluorescens Bact. Gram-neg inner 1 0 1.7 ± 3.0 33 ± 21 -3.4
2.3.06.05. Carboxylesterase 3cn9 Pseudomonas aeruginosa Bact. Gram-neg inner 1 0 3.5 ± 2.1 11 ± 32 -4.1
2.3.06.05. Thermostable Esterase 3doh Thermotoga maritima Bact. Gram-neg inner 1 0 4.0 ± 2.0 84 ± 13 -4.4
2.3.06.04. Acyl transferase LuxD 1tht Vibrio harveyi Bact. Gram-neg inner 1 0 3.3 ± 1.3 85 ± 4 -6.1
1.2.12.01. Fimbrial protein, type IV pilin, assembly 2hil Neisseria gonorrhoeae Bact. Gram-neg inner 18 1 29.6 ± 3.0 13 ± 1 -15.9
1.2.12.01. Fimbrial protein, monomer 1oqw Pseudomonas aeruginosa Bact. Gram-neg inner 1 1 29.8 ± 3.0 31 ± 8 -28.9
1.1.11.01. Ribosome-SecYE complex, structure 1 3j01 Escherichia coli Bact. Gram-neg inner 2 13 28.6 ± 0.0 5 ± 0 -86.4
1.1.14.02. Formate transporter 3q7k Salmonella enterica Bact. Gram-neg inner 5 30 28.6 ± 0.0 0 ± 0 -148.8
1.1.60.01. Protease GlpG, conformation 1 2xtv Escherichia coli Bact. Gram-neg inner 1 6 28.8 ± 1.6 14 ± 1 -61.1
1.1.28.03. SecDF protein-export membrane protein 3aqp Thermus thermophilus Bact. Gram-neg inner 1 12 29.8 ± 0.9 5 ± 1 -93.8
1.1.10.02. Maltose transporter MalFGK, a pre-translocation state 3puz Escherichia coli Bact. Gram-neg inner 2 14 29.0 ± 0.8 7 ± 0 -107.2
1.1.06.01. Cytochrome bc1, bacterial, structure 1 2qjy Rhodobacter sphaeroides Bact. Gram-neg inner 6 20 30.2 ± 0.6 0 ± 0 -188.6
1.1.25.02. Lactose permease LacY, structure 2 2v8n Escherichia coli Bact. Gram-neg inner 1 12 31.8 ± 0.8 5 ± 0 -86.4
1.1.52.01. Oligosaccharyltransferase PglB 3rce Campylobacter lari Bact. Gram-neg inner 1 13 28.8 ± 0.9 8 ± 0 -89.6
1.1.12.01. Voltage-gated sodium channel Nav1.7- NavAb, structure 1 3rvy Arcobacter butzleri Bact. Gram-neg inner 4 24 29.6 ± 0.4 0 ± 0 -216.9
1.1.33.01. Bile acid sodium symporter ASBT, inward-open conformation 3zuy Neisseria meningitidis Bact. Gram-neg inner 1 10 29.8 ± 1.5 15 ± 2 -82.3
1.2.13.01. Intrinsic membrane protein PufX 2ita Rhodobacter sphaeroides Bact. Gram-neg inner 1 1 32.2 ± 5.1 33 ± 1 -22.8
1.1.02.05. Light-harvesting protein B-870, beta chain 1wrg Rhodospirillum rubrum Bact. Gram-neg inner 1 1 27.0 ± 4.7 44 ± 1 -23.9
1.1.02.05. Light-harvesting protein B-875, beta chain 1jo5 Rhodobacter sphaeroides Bact. Gram-neg inner 1 1 29.6 ± 1.5 20 ± 2 -24.7
1.1.06.01. Cytochrome bc1, bacterial 2yiu Paracoccus denitrificans Bact. Gram-neg inner 6 20 29.8 ± 0.5 0 ± 0 -188.8
1.1.44.01. DsbB-DsbA complex, conformation 3 2leg Escherichia coli Bact. Gram-neg inner 1 4 30.6 ± 1.7 34 ± 2 -36.3
1.1.01.01. Green-light absorbing proteorhodopsin 2l6x Gamma-proteobacterium Bact. Gram-neg inner 1 7 27.8 ± 1.3 18 ± 1 -55.2
1.1.48.01. Putative sulfate permease CysZ 3tx3 Idiomarina loihiensis Bact. Gram-neg inner 1 6 29.8 ± 0.6 17 ± 4 -49.5
2.3.13.03. Thiol-disulfide interchange protein DsbA 1u3a Escherichia coli Bact. Gram-neg inner 1 0 2.2 ± 1.4 86 ± 8 -4.2
2.4.06.01. STAR-related lipid transfer protein from bacteria 3qsz Xanthomonas axonopodis Bact. Gram-neg inner 1 0 3.7 ± 1.4 58 ± 15 -3.0
1.1.10.02. Methionine importer MetNI, conformation 2 3tuj Escherichia coli Bact. Gram-neg inner 2 10 30.4 ± 1.3 7 ± 1 -84.5
3.1.02.03. Juxtamembrane helix of ATP synthase subunit b 2khk Escherichia coli Bact. Gram-neg inner 1 0 1.9 ± 0.1 85 ± 3 -3.9
1.1.26.01. Leucine transporter LeuT, inward-facing conformation 3tt3 Aquifex aeolicus Bact. Gram-neg inner 1 12 27.4 ± 1.6 9 ± 0 -89.1
1.1.12.02. Potassium channel Kirbac3.1, open conformation 3zrs Magnetospirillum magnetotacticum Bact. Gram-neg inner 4 8 30.0 ± 1.1 0 ± 0 -85.9
1.2.32.01. Cytochrome P450 1n97 Thermus thermophilus Bact. Gram-neg inner 1 0 5.2 ± 0.3 43 ± 5 -9.9
2.4.06.04. STAR-related bacterial protein 2d4r Thermus thermophilus Bact. Gram-neg inner 1 0 6.9 ± 2.2 28 ± 6 -7.1
2.3.04.01. Sorbitol dehydrogenase 1k2w Rhodobacter sphaeroides Bact. Gram-neg inner 2 0 2.2 ± 0.3 89 ± 1 -4.4
2.1.07.01. Nonaheme cytochrome c 1duw Desulfovibrio desulfuricans Bact. Gram-neg inner 1 0 5.1 ± 0.4 87 ± 10 -4.9
1.1.63.01. Signal peptidase I 3iiq Escherichia coli Bact. Gram-neg inner 2 0 4.3 ± 0.5 57 ± 2 -10.2
1.2.12.01. Fimbrial protein 3sok Dichelobacter nodosus (Bacteroides nodosus) Bact. Gram-neg inner 1 1 29.8 ± 3.9 18 ± 5 -25.0
2.2.05.01. Azurin 1xb8 Pseudomonas aeruginosa Bact. Gram-neg inner 1 0 2.7 ± 0.6 47 ± 4 -5.2
2.4.20.02. Arylamine N-acetyltransferase 1w4t Pseudomonas aeruginosa Bact. Gram-neg inner 1 0 2.8 ± 0.4 82 ± 1 -5.8
2.1.08.01. Cytochrome c peroxidase 1nml Marinobacter hydrocarbonoclasticus Bact. Gram-neg inner 1 0 2.2 ± 0.4 83 ± 0 -7.9
1.1.49.01. ATP-dependent zinc metalloprotease FtsH 1lv7 Escherichia coli Bact. Gram-neg inner 1 0 2.1 ± 1.0 80 ± 11 -4.3
2.3.16.09. GTP-binding protein YjiA 1nij Escherichia coli Bact. Gram-neg inner 1 0 3.4 ± 0.1 41 ± 1 -6.7
2.3.31.01. Sorbose-specific phosphotransferase enzyme IIB component 1nrz Klebsiella pneumoniae Bact. Gram-neg inner 1 0 2.1 ± 0.7 83 ± 3 -4.5
2.2.25.01. Superoxide dismutase [Cu-Zn] 1oal Photobacterium leiognathi Bact. Gram-neg inner 1 0 2.4 ± 0.9 77 ± 2 -6.8
2.3.32.01. UDP-N-acetylmuramate--L-alanine ligase 1p31 Haemophilus influenzae Bact. Gram-neg inner 1 0 4.4 ± 1.8 29 ± 14 -4.6
2.1.50.01. Phosphate transport system protein phoU homolog 2 1sum Thermotoga maritima Bact. Gram-neg inner 1 0 4.9 ± 2.1 68 ± 4 -4.3
2.2.12.05. Glucans biosynthesis protein G 1txk Escherichia coli Bact. Gram-neg inner 1 0 2.3 ± 0.7 80 ± 8 -5.1
2.4.40.01. IpgB2 protein 3lxr Shigella flexneri Bact. Gram-neg inner 2 0 2.7 ± 0.4 75 ± 2 -6.7
2.3.29.01. Undecaprenyl pyrophosphate synthase 2d2r Helicobacter pylori Bact. Gram-neg inner 2 0 1.3 ± 0.9 78 ± 1 -4.5
1.1.25.02. Lactose permease LacY, structure 6 5gxb Escherichia coli Bact. Gram-neg inner 1 12 33.8 ± 1.5 1 ± 1 -89.6
1.1.15.02. Proton-gated ion channel, inactive conformation 5 5lg3 Erwinia chrysanthemi Bact. Gram-neg inner 20 5 33.8 ± 1.1 0 ± 0 -108.7
1.1.55.01. Bacterial polysaccharide co-polymerase FepE 3b8n Escherichia coli Bact. Gram-neg inner 9 0 1.6 ± 0.1 1 ± 0 -20.3
1.1.62.01. Diguanylate cyclase/phosphodiesterase 3pjv Pseudomonas fluorescens Bact. Gram-neg inner 5 0 4.6 ± 1.5 79 ± 4 -6.6
1.1.24.01. Bestrophin ion channel 4wd8 Klebsiella pneumoniae Bact. Gram-neg inner 5 20 27.4 ± 0.6 0 ± 0 -119.7
2.2.07.01. Acidic stress response factor 3hpe Helicobacter pylori Bact. Gram-neg inner 1 0 3.0 ± 0.7 34 ± 8 -6.1
2.2.07.01. Protein yceI 1y0g Escherichia coli Bact. Gram-neg inner 1 0 4.2 ± 1.5 24 ± 16 -2.1
2.2.07.01. YceI-like protein 3q34 Pseudomonas syringae Bact. Gram-neg inner 2 0 1.0 ± 1.1 89 ± 2 -3.9
1.1.65.01. Concentrative nucleoside transporter 3tij Vibrio cholerae Bact. Gram-neg inner 3 27 27.0 ± 0.5 0 ± 0 -155.2
1.1.26.05. Glutamate/gamma-aminobutyrate antiporter 4dji Escherichia coli Bact. Gram-neg inner 1 12 30.0 ± 1.1 10 ± 1 -98.9
1.1.10.03. ABC transporter, inward-facing conformation 3qf4 Thermotoga maritima Bact. Gram-neg inner 2 12 32.0 ± 0.8 2 ± 0 -104.9
1.1.15.02. Proton-gated ion channel, inactive conformation 2 3uq7 Erwinia chrysanthemi Bact. Gram-neg inner 5 20 32.0 ± 1.6 0 ± 1 -92.6
1.1.12.01. NaK-NavSulP chimera channel 3vou Sulfitobacter sp. Bact. Gram-neg inner 4 8 30.4 ± 0.8 0 ± 0 -100.1
1.1.07.01. Bacterial cytochrome c oxidase, caa3-type 2yev Thermus thermophilus Bact. Gram-neg inner 3 21 31.2 ± 0.8 6 ± 0 -146.1
1.1.28.02. Efflux transporter CusA, complex with CusB, pre-extrusion state 3t56 Escherichia coli Bact. Gram-neg inner 3 36 30.4 ± 0.6 0 ± 0 -153.7
1.1.07.01. Bacterial cytochrome c oxidase 3s8g Thermus thermophilus Bact. Gram-neg inner 3 15 31.2 ± 1.1 7 ± 0 -112.3
1.1.26.01. Leucine transporter LeuT, outward-facing conformation, from bicelles 4fxz Aquifex aeolicus Bact. Gram-neg inner 2 24 28.0 ± 0.6 0 ± 0 -144.3
1.1.66.01. K(+)-pumping pyrophosphatase, structure 1 4av3 Thermotoga maritima Bact. Gram-neg inner 2 32 29.8 ± 0.7 0 ± 0 -182.5
2.3.16.10. Tetraacyldisaccharide 4-kinase 4ehx Aquifex aeolicus Bact. Gram-neg inner 1 0 8.0 ± 1.1 69 ± 3 -13.9
2.3.16.10. Tetraacyldisaccharide 4-kinase, complex with ADP/ATP 4ehy Aquifex aeolicus Bact. Gram-neg inner 1 0 7.9 ± 0.9 71 ± 4 -12.1
1.1.10.01. ABC transporter BtuCD, nucleotide-bound state 4fi3 Escherichia coli Bact. Gram-neg inner 2 20 29.0 ± 1.0 0 ± 0 -118.3
2.3.10.01. Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase 3s2u Pseudomonas aeruginosa Bact. Gram-neg inner 1 0 6.8 ± 0.9 60 ± 2 -8.3
1.1.12.01. Sodium channel NavMs, open state 1 4f4l Magnetococcus marinus Bact. Gram-neg inner 4 8 28.2 ± 1.3 1 ± 0 -74.6
1.1.27.01. Zinc transporter YiiP, inward-facing conformation 3j1z Shewanella oneidensis Bact. Gram-neg inner 2 12 28.6 ± 1.2 8 ± 1 -54.4
1.1.25.06. D-xylose-proton symporter xylE, conformation 1 4gc0 Escherichia coli Bact. Gram-neg inner 1 12 30.2 ± 0.9 1 ± 0 -90.2
1.1.15.02. Proton-gated ion channel, inactive conformation 4 4a97 Erwinia chrysanthemi Bact. Gram-neg inner 5 40 31.8 ± 0.5 0 ± 0 -125.8
1.1.72.01. Dicarboxylate/sodium symporter NadC 4f35 Vibrio cholerae Bact. Gram-neg inner 2 28 27.8 ± 0.2 1 ± 0 -82.5
1.1.21.01. CorA magnesium transporter, structure 2 4eeb Thermotoga maritima Bact. Gram-neg inner 5 10 30.0 ± 1.0 1 ± 1 -81.6
1.1.14.02. Nitrite transporter NirC 4fc4 Salmonella typhimurium Bact. Gram-neg inner 5 35 33.8 ± 0.0 0 ± 0 -112.5
1.1.75.01. Sec-independent protein translocase TatC 4b4a Aquifex aeolicus Bact. Gram-neg inner 1 6 30.4 ± 1.2 17 ± 0 -51.7
1.1.10.01. Hemin transport system permease, HmuU 4g1u Yersinia pestis Bact. Gram-neg inner 2 20 29.8 ± 0.5 0 ± 0 -114.3
1.1.76.01. Acid-activated urea channel 3ux4 Helicobacter pylori Bact. Gram-neg inner 6 36 30.0 ± 0.5 0 ± 0 -190.2
1.1.77.01. Cellulose synthase, structure 1 4hg6 Rhodobacter sphaeroides Bact. Gram-neg inner 2 9 30.0 ± 1.3 17 ± 0 -85.0
1.1.12.03. Multi-ligand gated K(+) channel, TrkA, mutant 4gx0 Geobacter sulfurreducens Bact. Gram-neg inner 4 8 31.8 ± 1.3 0 ± 0 -109.5
1.1.12.03. Multi-ligand gated K(+) channel, TrkA 4gx5 Geobacter sulfurreducens Bact. Gram-neg inner 4 8 31.6 ± 0.7 0 ± 0 -94.6
1.1.05.06. Ni/Fe-hydrogenase complex 4gd3 Escherichia coli Bact. Gram-neg inner 3 6 27.2 ± 1.4 9 ± 1 -42.4
1.1.38.01. Na+/drug antiporter NorM, outward-open, structure 1 4hum Neisseria gonorrhoeae Bact. Gram-neg inner 1 12 28.6 ± 1.1 5 ± 1 -54.5
1.1.19.01. Mechanosensitive channel protein MscS, closed state 4hw9 Helicobacter pylori Bact. Gram-neg inner 7 14 31.6 ± 1.8 0 ± 0 -140.9
1.1.60.01. Protease GlpG, complex with inhibitor, conformation 2 3zeb Escherichia coli Bact. Gram-neg inner 1 6 28.4 ± 1.3 12 ± 0 -64.0
1.1.04.01. Respiratory complex I 4hea Thermus thermophilus Bact. Gram-neg inner 7 67 29.8 ± 0.5 10 ± 0 -299.7
1.1.44.01. Disulfide bond formation protein B, conformation 2 2ltq Escherichia coli Bact. Gram-neg inner 1 4 28.4 ± 1.5 26 ± 0 -36.5
1.1.21.01. CorA magnesium transporter, complete loops, structure 1 4i0u Thermotoga maritima Bact. Gram-neg inner 5 10 30.4 ± 1.1 0 ± 0 -83.4
1.1.05.01. Polysulfide reductase, substrate-bound state 2vpx Thermus thermophilus Bact. Gram-neg inner 2 16 27.1 ± 1.1 0 ± 1 -103.3
1.1.11.01. Protein translocase SecY, closed state 2zqp Thermus thermophilus Bact. Gram-neg inner 2 11 29.8 ± 0.4 9 ± 0 -99.4
1.1.10.01. ABC transporter BtuCD, complex with BtuF, structure 2 4dbl Escherichia coli Bact. Gram-neg inner 2 20 29.4 ± 1.0 4 ± 0 -123.4
1.1.10.02. Methionine importer MetNI, conformation 3 3dhw Escherichia coli Bact. Gram-neg inner 2 10 29.2 ± 1.0 1 ± 0 -82.5
1.1.28.01. Multidrug efflux transporter AcrB, symmetric 3d9b Escherichia coli Bact. Gram-neg inner 3 36 28.4 ± 0.6 0 ± 0 -189.9
1.1.28.01. Multidrug efflux transporter AcrB, asymmetric, complex with ankyrin repeat 2 3nog Escherichia coli Bact. Gram-neg inner 3 36 29.0 ± 0.5 3 ± 0 -202.9
1.1.25.02. Lactose permease LacY, structure 3 1pv6 Escherichia coli Bact. Gram-neg inner 1 12 31.8 ± 1.2 5 ± 0 -89.1
1.1.25.02. Lactose permease LacY, structure 4 2y5y Escherichia coli Bact. Gram-neg inner 1 12 31.8 ± 1.3 4 ± 1 -89.0
1.1.26.01. Leucine transporter LeuT, outward-facing substrate-free conformation 3tt1 Aquifex aeolicus Bact. Gram-neg inner 2 24 28.2 ± 1.2 0 ± 0 -160.8
1.1.12.01. Bacterial cyclic nucleotide regulated ion channel, different conformation 2zd9 Rhizobium loti Bact. Gram-neg inner 4 24 31.6 ± 1.2 0 ± 0 -192.8
1.1.12.01. Voltage-gated sodium channel NavAb, structure 2 4ekw Arcobacter butzleri Bact. Gram-neg inner 4 24 29.4 ± 0.5 0 ± 0 -201.0
1.1.15.02. Proton-gated ion channel, conformation 1 3tlw Gloeobacter violaceus Bact. Gram-neg inner 5 20 34.0 ± 1.6 0 ± 0 -190.3
1.1.21.01. CorA magnesium transporter, structure 3 2iub Thermotoga maritima Bact. Gram-neg inner 5 10 28.0 ± 1.2 0 ± 0 -65.7
1.1.35.01. Sodium/proton antiporter 1 (NhaA), dimer 3fi1 Escherichia coli Bact. Gram-neg inner 2 24 28.4 ± 1.6 2 ± 1 -126.7
1.1.44.01. DsbB - DsbA complex, conformation 4 3e9j Escherichia coli Bact. Gram-neg inner 1 4 26.8 ± 1.5 31 ± 1 -27.1
1.1.50.01. Particulate methane monooxygenase, different structure 3rgb Methylococcus capsulatus Bact. Gram-neg inner 9 39 28.2 ± 0.6 0 ± 0 -204.9
1.1.60.01. Protease GlpG, complex with inhibitor, conformation 3 3ubb Escherichia coli Bact. Gram-neg inner 1 6 29.8 ± 1.3 21 ± 1 -65.3
1.1.60.01. Protease GlpG, conformation 2 2nrf Escherichia coli Bact. Gram-neg inner 1 6 27.6 ± 1.5 13 ± 2 -45.9
1.1.60.01. Protease GlpG, conformation 3 2irv Escherichia coli Bact. Gram-neg inner 1 6 28.2 ± 1.3 23 ± 5 -48.1
1.1.66.01. K(+)-pumping pyrophosphatase, structure 2 4av6 Thermotoga maritima Bact. Gram-neg inner 2 32 29.8 ± 0.8 0 ± 0 -173.1
1.1.75.02. Sec-independent protein translocase TatA 2lzr Escherichia coli Bact. Gram-neg inner 1 1 29.2 ± 1.8 26 ± 2 -29.1
1.1.75.02. Sec-independent protein translocase TatA, nonamer model 2lzs Escherichia coli Bact. Gram-neg inner 9 9 29.2 ± 1.8 26 ± 2 -29.1
1.1.10.03. Lipid flippase MsbA, closed state 3b5x Vibrio cholerae Bact. Gram-neg inner 2 12 30.2 ± 1.0 0 ± 0 -58.7
1.2.33.02. Protoporphyrinogen oxidase 2ivd Myxococcus xanthus Bact. Gram-neg inner 1 0 3.7 ± 0.2 29 ± 2 -8.0
1.1.25.07. Nitrite exporter NarU 4iu9 Escherichia coli Bact. Gram-neg inner 1 12 31.0 ± 1.2 4 ± 0 -88.1
1.1.25.06. D-xylose-proton symporter xylE, conformation 2 4ja3 Escherichia coli Bact. Gram-neg inner 1 12 29.8 ± 1.0 4 ± 1 -87.6
1.1.25.06. D-xylose-proton symporter xylE, conformation 3 4ja4 Escherichia coli Bact. Gram-neg inner 1 12 28.2 ± 1.3 0 ± 0 -82.8
1.1.60.01. Protease GlpG, crystallographic trimer 4h1d Escherichia coli Bact. Gram-neg inner 3 18 27.0 ± 0.1 2 ± 0 -108.7
1.1.01.01. Blue-light absorbing proteorhodopsin 4knf Gamma-proteobacterium Bact. Gram-neg inner 5 35 28.4 ± 1.5 1 ± 1 -159.6
1.1.01.01. Proteorhodopsin 4jq6 Gamma-proteobacterium Bact. Gram-neg inner 6 42 28.4 ± 1.3 0 ± 0 -188.5
1.1.25.07. Nitrate/nitrite exchanger NarK, partially occluded state 4jr9 Escherichia coli Bact. Gram-neg inner 1 12 29.6 ± 1.0 8 ± 0 -86.2
1.1.08.01. F1F0 ATP synthase, F0 complex 3zk1 Fusobacterium nucleatum Bact. Gram-neg inner 11 22 36.6 ± 2.3 0 ± 0 -84.3
1.1.54.01. Diacylglycerol kinase (DAGK), conformation 1 3ze5 Escherichia coli Bact. Gram-neg inner 3 9 29.8 ± 0.9 2 ± 1 -72.5
1.1.10.02. Maltose transporter MalFGK, complex with protein EIIAglc 4jbw Escherichia coli Bact. Gram-neg inner 2 14 29.8 ± 0.8 4 ± 1 -107.8
1.1.46.01. MerF bacterial mercury uptake transporter, structure 2 2m67 Morganella morganii Bact. Gram-neg inner 1 2 24.2 ± 4.7 30 ± 1 -29.7
1.1.25.05. Bacterial proton:oligopeptide symporter, structure 1 4lep Shewanella oneidensis Bact. Gram-neg inner 1 14 29.4 ± 0.6 7 ± 0 -89.1
1.1.35.01. Sodium/proton antiporter 1 (NhaA), dimer, different conformation 4atv Escherichia coli Bact. Gram-neg inner 2 24 28.6 ± 1.3 1 ± 0 -154.7
1.1.01.01. Sensory rhodopsin, trimer 2m3g Nostoc sp. Bact. Gram-neg inner 3 21 31.8 ± 0.8 2 ± 0 -132.8
1.1.25.03. Transporter YajR 3wdo Escherichia coli Bact. Gram-neg inner 1 12 31.0 ± 1.4 2 ± 0 -81.8
1.1.80.01. Phospho-N-acetylmuramoyl-pentapeptide-transferase, structure 1 4j72 Aquifex aeolicus Bact. Gram-neg inner 2 20 31.4 ± 1.2 0 ± 0 -141.4
1.1.35.02. Na+/H+ antiporter 4bwz Thermus thermophilus Bact. Gram-neg inner 2 26 29.6 ± 0.6 0 ± 0 -120.8
1.2.12.01. Geopilin domain 1 protein 2m7g Geobacter sulfurreducens Bact. Gram-neg inner 1 1 29.8 ± 4.2 39 ± 8 -26.8
1.1.12.01. Sodium channel NavMs, open state 2 3zjz Magnetococcus marinus Bact. Gram-neg inner 4 8 29.8 ± 1.8 0 ± 1 -61.1
1.1.26.04. L-carnitine/gamma-butyrobetaine antiporter 4m8j Proteus mirabilis Bact. Gram-neg inner 3 36 29.8 ± 0.8 0 ± 0 -220.2
1.1.28.01. Heavy metal cation tricomponent efflux pump, ZneA 4k0e Ralstonia metallidurans Bact. Gram-neg inner 3 36 28.0 ± 0.7 0 ± 0 -161.5
1.1.12.01. Sodium channel BacNaV 4lto Alkalilimnicola ehrlichei Bact. Gram-neg inner 4 8 30.6 ± 1.1 2 ± 1 -97.3
1.1.11.01. Ribosome-SecYE complex, structure 2 3j45 Escherichia coli Bact. Gram-neg inner 3 13 26.8 ± 0.2 10 ± 0 -65.3
1.1.11.01. Ribosome-SecYE complex, structure 3 3j46 Escherichia coli Bact. Gram-neg inner 4 14 27.2 ± 1.0 14 ± 0 -56.8
1.2.28.01. Transmembrane regulatory peptide MgtR 2mc7 Salmonella enterica Bact. Gram-neg inner 1 1 31.8 ± 2.2 13 ± 4 -26.8
1.1.15.02. Proton-gated ion channel, conformation 2 4lmj Gloeobacter violaceus Bact. Gram-neg inner 5 20 32.4 ± 0.7 0 ± 0 -177.4
1.1.15.02. Proton-gated ion channel, conformation 3 4lml Gloeobacter violaceus Bact. Gram-neg inner 5 20 31.8 ± 0.7 0 ± 0 -178.8
1.1.02.04. Reaction center-LH1-PufX dimer complex, unit 1 4jcb Rhodobacter sphaeroides Bact. Gram-neg inner 32 40 28.0 ± 0.5 1 ± 0 -127.0
1.1.02.04. Reaction center-LH1-PufX dimer complex, unit 2 4jc9 Rhodobacter sphaeroides Bact. Gram-neg inner 32 40 28.4 ± 0.7 1 ± 0 -126.6
1.1.12.02. Potassium channel Kirbac3.1, open conformation 2 4lp8 Magnetospirillum magnetotacticum Bact. Gram-neg inner 4 8 29.2 ± 0.8 0 ± 0 -89.2
1.1.33.01. Sodium bile acid symporter, outward-open conformation 1 4n7x Yersinia frederiksenii Bact. Gram-neg inner 1 10 28.6 ± 1.0 12 ± 0 -79.7
1.1.33.01. Sodium bile acid symporter, inward-open conformation 2 4n7w Yersinia frederiksenii Bact. Gram-neg inner 10 10 28.8 ± 1.4 12 ± 3 -68.9
1.1.09.01. Copper efflux ATPase, E2P state 4bbj Legionella pneumophila Bact. Gram-neg inner 1 8 30.2 ± 0.9 16 ± 1 -69.4
1.1.15.02. Proton-gated ion channel, resting state 4npq Gloeobacter violaceus Bact. Gram-neg inner 5 20 33.8 ± 2.1 1 ± 0 -185.4
1.1.12.01. Bacterial cyclic nucleotide regulated ion channel, full structure 4chw Rhizobium loti Bact. Gram-neg inner 4 24 29.8 ± 0.6 0 ± 0 -187.8
1.1.12.01. Bacterial cyclic nucleotide regulated ion channel, full structure, with cAMP 4chv Rhizobium loti Bact. Gram-neg inner 4 24 28.4 ± 0.5 0 ± 0 -138.2
1.1.25.08. Na+/melibiose symporter 4m64 Salmonella typhimurium Bact. Gram-neg inner 1 12 30.4 ± 1.3 11 ± 0 -64.9
1.1.51.01. Vitamin K epoxide reductase, conformation 2 4nv2 Synechococcus sp. Bact. Gram-neg inner 1 5 29.6 ± 2.0 6 ± 0 -50.3
2.1.02.01. Linoleate 9/13-lipoxygenase 4g32 Pseudomonas aeruginosa Bact. Gram-neg inner 1 0 5.8 ± 0.9 33 ± 2 -10.7
2.1.02.01. Linoleate 9/13-lipoxygenase, with N-terminal helix 4g33 Pseudomonas aeruginosa Bact. Gram-neg inner 1 0 4.3 ± 0.0 16 ± 0 -9.1
1.1.10.03. ABC transporter related protein 4mrs Novosphingobium aromaticivorans Bact. Gram-neg inner 2 12 32.0 ± 1.0 0 ± 0 -92.5
1.1.02.04. LH1-RC complex, C2 form 3wmm Thermochromatium tepidum Bact. Gram-neg inner 35 43 35.8 ± 0.0 1 ± 0 -254.6
1.1.02.04. LH1-RC complex, P21 form 3wmo Thermochromatium tepidum Bact. Gram-neg inner 35 43 31.8 ± 0.1 0 ± 0 -234.8
1.1.77.01. Cellulose synthase, structure 2 4p00 Rhodobacter sphaeroides Bact. Gram-neg inner 2 9 27.6 ± 1.2 19 ± 0 -82.0
1.1.77.01. Cellulose synthase, structure 3 4p02 Rhodobacter sphaeroides Bact. Gram-neg inner 2 9 29.8 ± 1.2 18 ± 1 -82.5
1.1.28.01. Multidrug efflux transporter AcrB-AcrZ complex, structure 1 4c48 Escherichia coli Bact. Gram-neg inner 6 39 29.2 ± 0.8 0 ± 0 -217.3
1.1.54.01. Diacylglycerol kinase (DAGK), conformation 2 4bpd Escherichia coli Bact. Gram-neg inner 3 9 29.4 ± 1.3 3 ± 2 -71.0
1.1.75.03. Sec-independent protein translocase protein TatB 2mi2 Escherichia coli Bact. Gram-neg inner 1 1 27.6 ± 2.5 22 ± 0 -18.5
1.1.87.01. Phosphatidylglycerophosphatase 5jwy Escherichia coli Bact. Gram-neg inner 1 6 30.8 ± 0.0 16 ± 2 -38.8
1.1.88.01. NAD(P) transhydrogenase, structure 1 4o9p Thermus thermophilus Bact. Gram-neg inner 4 24 29.8 ± 0.9 0 ± 0 -162.0
1.1.10.03. Microcin-J25 export ATP-binding/permease protein McjD 4pl0 Escherichia coli Bact. Gram-neg inner 2 12 32.4 ± 0.8 0 ± 0 -107.2
1.1.89.01. Inner membrane protein YgaP 2mpn Escherichia coli Bact. Gram-neg inner 2 4 30.0 ± 1.5 0 ± 1 -29.6
1.1.50.01. Particulate methane monooxygenase 4phz Methylocystis sp. Bact. Gram-neg inner 12 42 30.0 ± 0.9 0 ± 0 -200.6
1.1.90.01. Phosphatidate cytidylyltransferase, conformation 2 4q2g Thermotoga maritima Bact. Gram-neg inner 2 18 26.8 ± 0.4 0 ± 2 -55.6
1.1.25.05. Bacterial proton:oligopeptide symporter, structure 2 4tpg Shewanella oneidensis Bact. Gram-neg inner 14 14 30.8 ± 1.0 9 ± 0 -100.8
1.1.25.05. Bacterial proton:oligopeptide symporter, structure 3 4tpj Shewanella oneidensis Bact. Gram-neg inner 1 14 30.6 ± 0.9 9 ± 0 -90.0
1.1.01.01. Sensory rhodopsin, dimer 4tl3 Nostoc sp. Bact. Gram-neg inner 2 17 30.6 ± 1.1 0 ± 0 -116.0
1.1.54.01. Diacylglycerol kinase (DAGK), conformation 3 4d2e Escherichia coli Bact. Gram-neg inner 3 9 29.8 ± 0.7 2 ± 0 -65.6
1.1.46.01. MerF bacterial mercury uptake transporter, structure 3 2moz Morganella morganii Bact. Gram-neg inner 1 2 27.8 ± 1.9 16 ± 2 -33.5
1.1.28.01. Drug efflux protein MtrD 4mt1 Neisseria gonorrhoeae Bact. Gram-neg inner 3 36 29.0 ± 0.3 0 ± 0 -214.1
1.1.25.06. D-xylose-proton symporter xylE, conformation 4 4qiq Escherichia coli Bact. Gram-neg inner 1 12 29.8 ± 1.8 1 ± 1 -72.6
1.1.25.05. Dipeptide permease D 4q65 Escherichia coli Bact. Gram-neg inner 1 14 30.2 ± 0.8 7 ± 1 -101.4
1.1.09.01. Zinc-transporting ATPase, ZntA, E2P state 4umv Shigella sonnei Bact. Gram-neg inner 1 8 30.6 ± 1.5 11 ± 2 -56.7
1.1.09.01. Zinc-transporting ATPase, ZntA, E2.PI state 4umw Shigella sonnei Bact. Gram-neg inner 1 8 31.0 ± 1.2 19 ± 2 -65.9
2.3.10.07. Lipopolysaccharide biosynthesis protein RfaG 2iw1 Escherichia coli Bact. Gram-neg inner 1 0 3.7 ± 3.1 85 ± 8 -6.0
1.1.41.01. Bacterial semiSWEET transporter 4qnc Leptospira biflexa Bact. Gram-neg inner 2 6 31.8 ± 1.6 4 ± 2 -66.5
1.1.41.01. Bacterial semiSWEET transporter 4qnd Vibrio sp. Bact. Gram-neg inner 2 6 33.0 ± 1.7 0 ± 0 -61.5
1.1.60.01. Protease GlpG, complex with peptide-based inhibitor 4qo2 Escherichia coli Bact. Gram-neg inner 1 6 28.6 ± 1.2 18 ± 0 -58.3
1.1.15.02. Proton-gated ion channel, pore blocker-bound conformation 4twd Erwinia chrysanthemi Bact. Gram-neg inner 5 20 32.0 ± 0.6 0 ± 0 -127.8
1.2.47.01. Nickel-cobalt-cadmium resistance protein NccX 4clv Alcaligenes xylosoxidans Bact. Gram-neg inner 1 0 3.1 ± 0.9 83 ± 0 -6.7
1.1.42.01. Nicotinamide riboside transporter PnuC 4qtn Neisseria mucosa Bact. Gram-neg inner 3 24 26.8 ± 0.7 0 ± 0 -112.0
1.1.91.01. Delta(14)-sterol reductase 4quv Methylomicrobium alcaliphilum Bact. Gram-neg inner 1 10 28.2 ± 1.4 11 ± 3 -81.4
1.1.11.01. Ribosome-SecYE complex, structure 4 3kcr Escherichia coli Bact. Gram-neg inner 3 12 29.2 ± 0.6 13 ± 0 -81.6
1.1.10.01. ABC transporter BtuCD, a nucleotide-bound outward facing state 4r9u Escherichia coli Bact. Gram-neg inner 2 20 28.6 ± 1.3 1 ± 1 -119.8
1.1.41.01. Bacterial semiSWEET transporter 4rng Thermodesulfovibrio yellowstonii Bact. Gram-neg inner 2 6 35.4 ± 2.5 5 ± 3 -72.8
3.1.02.16. Peptide 211-263 of YscU protein 2ml9 Yersinia pseudotuberculosis Bact. Gram-neg inner 1 0 2.9 ± 1.8 82 ± 5 -6.6
1.1.41.01. Magnesium ion transporter-E (MgtE), structure 2 4u9n Thermus thermophilus Bact. Gram-neg inner 2 10 31.8 ± 0.8 0 ± 0 -85.3
1.1.92.01. Na(+)-translocating NADH-quinone reductase 4p6v Vibrio cholerae Bact. Gram-neg inner 5 24 28.8 ± 0.3 5 ± 0 -111.8
1.1.30.01. Membrane protein insertase YidC, structure 1 3wvf Escherichia coli Bact. Gram-neg inner 1 5 26.8 ± 1.3 10 ± 2 -46.7
1.1.41.01. Bacterial semiSWEET transporter, inward-open conformation 4x5m Escherichia coli Bact. Gram-neg inner 2 6 31.6 ± 1.9 0 ± 3 -66.6
1.1.41.01. Bacterial semiSWEET transporter, outward-open conformation 4x5n Escherichia coli Bact. Gram-neg inner 2 6 36.8 ± 1.1 1 ± 3 -70.5
1.1.88.01. NAD(P) transhydrogenase, structure 2 4o9u Thermus thermophilus Bact. Gram-neg inner 4 24 30.6 ± 1.1 1 ± 0 -150.7
1.1.25.05. Glutathione uptake transporter, structure 2 4uvm Shewanella oneidensis Bact. Gram-neg inner 1 14 29.8 ± 0.7 10 ± 0 -105.3
1.1.15.02. Proton-gated ion channel - human GLRA1 channel chimera 4x5t Gloeobacter violaceus Bact. Gram-neg inner 5 20 35.8 ± 0.1 0 ± 0 -107.4
1.1.94.01. Ascorbate-specific permease IIC component UlaA, structure 1 4rp8 Escherichia coli Bact. Gram-neg inner 2 22 29.6 ± 0.4 3 ± 0 -129.1
1.1.94.01. Ascorbate-specific permease IIC component UlaA, structure 2 4rp9 Escherichia coli Bact. Gram-neg inner 2 22 29.8 ± 0.6 2 ± 0 -141.1
1.1.01.01. Sodium pumping rhodopsin, NaR, monomer 4xtl Dokdonia eikasta Bact. Gram-neg inner 1 7 29.8 ± 1.9 20 ± 2 -57.4
1.1.01.01. Sodium pumping rhodopsin, NaR, pentamer 4xto Dokdonia eikasta Bact. Gram-neg inner 5 35 29.8 ± 0.5 0 ± 0 -170.3
1.1.72.02. Antibiotic resistance efflux pump MtrF 4r1i Neisseria gonorrhoeae Bact. Gram-neg inner 2 22 28.9 ± 1.4 0 ± 0 -118.2
1.1.01.01. Sodium pumping rhodopsin, NaR, dimer 3x3b Dokdonia eikasta Bact. Gram-neg inner 2 14 29.8 ± 0.9 0 ± 0 -87.5
1.1.75.02. Sec-independent protein translocase TatA, dimer 2mn6 Escherichia coli Bact. Gram-neg inner 2 2 23.0 ± 1.2 47 ± 0 -26.5
1.1.72.02. YdaH transporter 4r0c Alcanivorax borkumensis Bact. Gram-neg inner 2 22 29.8 ± 0.5 0 ± 0 -155.5
1.1.08.01. F1F0 ATP synthase subunit c, deprotonated form 1c99 Escherichia coli Bact. Gram-neg inner 1 2 30.2 ± 3.0 36 ± 3 -30.7
1.1.08.01. F1F0 ATP synthase subunit c, double mutant 1l6t Escherichia coli Bact. Gram-neg inner 1 2 30.0 ± 4.4 36 ± 3 -28.2
1.2.52.01. Cytochrome c-type biogenesis protein CcmE 1sr3 Escherichia coli Bact. Gram-neg inner 1 0 2.8 ± 2.7 59 ± 6 -2.2
1.1.25.07. Nitrate/nitrite exchanger NarK, occluded state 4u4w Escherichia coli Bact. Gram-neg inner 1 12 30.0 ± 1.4 10 ± 1 -91.0
1.1.25.07. Nitrate/nitrite exchanger NarK, inward-open state 4u4t Escherichia coli Bact. Gram-neg inner 1 12 31.2 ± 1.1 5 ± 1 -94.2
1.1.10.02. Alg transporter 4tqu Sphingomonas sp. Bact. Gram-neg inner 2 12 30.6 ± 0.8 3 ± 0 -100.1
1.1.12.01. Na(v)Rh voltage-gated sodium channel 4dxw Alpha proteobacterium Bact. Gram-neg inner 4 24 29.2 ± 0.7 4 ± 0 -149.7
2.3.10.07. Lipopolysaccharide biosynthesis protein RfaG, 103-131 2n58 Escherichia coli Bact. Gram-neg inner 1 0 4.5 ± 1.1 64 ± 7 -6.3
1.1.10.03. Oligosaccharide flippase PglK, apo-inward state 1 5c78 Campylobacter jejuni Bact. Gram-neg inner 12 2 31.0 ± 1.1 2 ± 1 -120.6
1.1.10.03. Oligosaccharide flippase PglK, apo-inward state 2 5c76 Campylobacter jejuni Bact. Gram-neg inner 2 12 32.0 ± 0.8 1 ± 0 -120.5
1.1.25.03. Multidrug transporter MdfA 4zp0 Escherichia coli Bact. Gram-neg inner 1 12 29.8 ± 1.3 10 ± 0 -77.2
1.1.96.01. Fluoride ion transporter CrcB 5a43 Escherichia coli Bact. Gram-neg inner 2 8 31.8 ± 0.9 11 ± 0 -89.3
1.1.96.01. Fluoride ion transporter CrcB 5a40 Bordetella pertussis Bact. Gram-neg inner 2 8 30.8 ± 1.7 20 ± 1 -71.9
1.1.26.07. Fumarate transporter 5da0 Deinococcus radiodurans Bact. Gram-neg inner 1 14 26.8 ± 0.7 13 ± 1 -78.2
1.1.26.07. STAS domain of anion permease 3oiz Rhodobacter sphaeroides Bact. Gram-neg inner 1 0 3.9 ± 0.4 18 ± 5 -5.4
1.1.26.07. STAS domain of sulfate permease 4dgh Vibrio cholerae Bact. Gram-neg inner 1 0 4.6 ± 0.6 33 ± 2 -6.2
1.1.26.07. STAS domain of sulfate permease 4dgf Wolinella succinogenes Bact. Gram-neg inner 1 0 2.6 ± 0.5 51 ± 2 -7.0
1.1.15.02. Proton-gated ion channel, Glic/Elic chimera 4yeu Gloeobacter violaceus Bact. Gram-neg inner 5 20 32.6 ± 1.1 0 ± 0 -162.5
1.1.38.01. Na+/drug antiporter NorM, outward-open, structure 2 5c6p Neisseria gonorrhoeae Bact. Gram-neg inner 1 12 28.6 ± 1.1 13 ± 0 -45.3
2.1.59.01. AcrH-AopB chaperone-translocator complex 3wxx Aeromonas hydrophila Bact. Gram-neg inner 2 0 3.6 ± 2.2 51 ± 3 -7.4
1.1.08.01. F1F0 ATP synthase 5dn6 Paracoccus denitrificans Bact. Gram-neg inner 13 25 36.8 ± 0.3 3 ± 1 -57.9
1.1.25.09. Iron-regulated transporter, outward-facing state 5ayn Bdellovibrio bacteriovorus Bact. Gram-neg inner 1 12 29.8 ± 1.8 8 ± 4 -82.9
1.1.25.09. Iron-regulated transporter, inward-facing state 5ayo Bdellovibrio bacteriovorus Bact. Gram-neg inner 1 12 31.6 ± 0.7 7 ± 1 -89.2
1.1.11.01. Protein translocase SecY, resting state 5aww Thermus thermophilus Bact. Gram-neg inner 3 13 29.8 ± 1.2 5 ± 0 -111.5
1.1.11.01. Protein translocase SecY, peptide-bound 5ch4 Thermus thermophilus Bact. Gram-neg inner 3 13 29.8 ± 1.5 5 ± 1 -103.5
2.1.02.01. 9R-lipoxygenase 5ek8 Synechococcus sp. Bact. Gram-neg inner 1 0 4.0 ± 0.7 78 ± 6 -12.2
1.1.12.01. Voltage-gated sodium channel Nav1.7- NavAb, with antagonist 5ek0 Arcobacter butzleri Bact. Gram-neg inner 4 24 30.2 ± 0.6 0 ± 0 -236.2
1.1.98.01. Polyisoprenyl-phosphate glycosyltransferase GtrB 5eke Synechocystis sp. Bact. Gram-neg inner 4 8 31.4 ± 1.2 0 ± 0 -82.3
1.1.38.01. Multidrug transporter MatE 4z3n Escherichia coli Bact. Gram-neg inner 1 12 29.6 ± 1.1 7 ± 1 -93.1
1.1.35.02. Na+/H+ antiporter, inward-open conformation 5bz2 Thermus thermophilus Bact. Gram-neg inner 2 26 29.8 ± 0.5 3 ± 0 -132.9
1.1.35.02. Na+/H+ antiporter, outward-open conformation 5bz3 Thermus thermophilus Bact. Gram-neg inner 2 26 29.2 ± 0.8 0 ± 0 -108.2
1.1.99.01. Prolipoprotein diacylglyceryl transferase 5azb Escherichia coli Bact. Gram-neg inner 1 7 30.2 ± 1.5 8 ± 1 -68.8
1.1.35.03. Citrate-sodium symporter 5a1s Salmonella enterica Bact. Gram-neg inner 2 22 28.6 ± 0.9 5 ± 0 -133.4
1.1.52.02. 4-amino-4-deoxy-L-arabinose transferase 5f15 Cupriavidus metallidurans Bact. Gram-neg inner 1 13 29.2 ± 0.7 3 ± 0 -93.8
1.1.21.01. CorA magnesium transporter, complete loops, structure 2 3jcf Thermotoga maritima Bact. Gram-neg inner 5 10 31.6 ± 0.7 0 ± 0 -78.0
1.1.12.01. Sodium channel NavMs, full-length 5hvx Magnetococcus marinus Bact. Gram-neg inner 4 24 29.0 ± 0.6 0 ± 0 -159.6
1.1.77.01. Cellulose synthase, structure 4 5ejz Rhodobacter sphaeroides Bact. Gram-neg inner 1 8 29.6 ± 1.1 18 ± 0 -86.9
1.1.12.01. Sodium channel BacNaV, channel neck mutants 5hj8 Alkalilimnicola ehrlichei Bact. Gram-neg inner 4 8 30.6 ± 1.1 0 ± 0 -96.1
1.1.15.02. Proton-gated ion channel, conformation 4 5heo Gloeobacter violaceus Bact. Gram-neg inner 5 20 32.0 ± 0.8 0 ± 0 -121.8
1.1.15.02. Proton-gated ion channel, conformation 5 5heh Gloeobacter violaceus Bact. Gram-neg inner 5 20 33.4 ± 1.0 0 ± 0 -183.3
1.1.15.02. Proton-gated ion channel, conformation 6 5heg Gloeobacter violaceus Bact. Gram-neg inner 5 20 32.0 ± 0.8 0 ± 0 -186.8
1.1.80.01. Phospho-N-acetylmuramoyl-pentapeptide-transferase, structure 2 5ckr Aquifex aeolicus Bact. Gram-neg inner 2 20 30.4 ± 1.1 0 ± 0 -149.3
1.1.78.01. Lipoprotein signal peptidase 5dir Pseudomonas aeruginosa Bact. Gram-neg inner 1 4 29.8 ± 1.9 13 ± 0 -42.7
1.1.15.02. Proton-gated ion channel, conformation 7 5hcm Gloeobacter violaceus Bact. Gram-neg inner 5 20 32.0 ± 1.4 0 ± 0 -184.3
1.1.01.01. Bacteriorhodopsin 5azd Thermus thermophilus Bact. Gram-neg inner 4 28 30.0 ± 0.5 3 ± 1 -121.3
1.1.07.01. Nitric oxide reductase 4xyd Roseobacter denitrificans Bact. Gram-neg inner 2 13 31.4 ± 1.1 7 ± 1 -101.6
1.1.26.01. Leucine transporter LeuT, outward-facing, return state 5jae Aquifex aeolicus Bact. Gram-neg inner 2 24 29.0 ± 0.8 0 ± 0 -143.0
1.1.26.01. Leucine transporter LeuT, outward-facing, return state, mutant 5jag Aquifex aeolicus Bact. Gram-neg inner 1 12 26.8 ± 1.1 11 ± 0 -80.7
1.1.29.01. YddG transporter 5i20 Starkeya novella Bact. Gram-neg inner 1 10 30.2 ± 1.3 0 ± 0 -78.1
1.1.39.01. Riboflavin transporter RibU 5kbw Thermotoga maritima Bact. Gram-neg inner 6 1 32.4 ± 1.6 8 ± 1 -52.7
1.1.01.01. Chloride pumping rhodopsin 5b2n Nonlabens marinus Bact. Gram-neg inner 1 7 32.0 ± 1.0 12 ± 0 -63.1
1.1.02.07. Bacteriochlorophyll c-binding protein, complex with chlorophyll 5lcb Chlorobium tepidum Bact. Gram-neg inner 6 0 13.0 ± 0.0 89 ± 0 -54.3
1.1.02.07. Bacteriochlorophyll c-binding protein 2k37 Chlorobium tepidum Bact. Gram-neg inner 1 0 5.8 ± 0.2 87 ± 2 -17.8
2.3.05.03. L-amino acid deaminase 5hxw Proteus vulgaris Bact. Gram-neg inner 1 0 6.4 ± 2.1 86 ± 6 -9.0
1.1.12.01. Voltage-gated sodium channel NavAb, structure 3 5klb Arcobacter butzleri Bact. Gram-neg inner 4 24 30.8 ± 0.3 1 ± 0 -218.3
1.1.26.05. Arginine/agmatine antiporter (AdiC), outward-facing structure 2 5j4i Escherichia coli Bact. Gram-neg inner 2 24 32.8 ± 0.9 0 ± 0 -155.1
1.2.42.01. UDP-2,3-diacylglucosamine hydrolase, lpxH 5k8k Haemophilus influenzae Bact. Gram-neg inner 1 0 9.3 ± 1.8 13 ± 7 -8.7
1.1.56.01. Inner membrane protein YejM, strain LT2 5i5f Salmonella typhimurium Bact. Gram-neg inner 1 0 3.7 ± 2.4 62 ± 11 -4.9
1.1.56.01. Inner membrane protein YejM, strain K12 5i5h Salmonella typhimurium Bact. Gram-neg inner 1 0 1.1 ± 1.6 65 ± 2 -3.6
1.1.103.01. ExbB/ExbD complex, structure 1 5sv0 Escherichia coli Bact. Gram-neg inner 5 15 31.8 ± 0.8 1 ± 1 -102.1
1.1.103.01. ExbB/ExbD complex, structure 2 5sv1 Escherichia coli Bact. Gram-neg inner 6 16 30.8 ± 0.5 2 ± 0 -109.5
1.2.42.01. UDP-2,3-diacylglucosamine hydrolase 5b49 Pseudomonas aeruginosa Bact. Gram-neg inner 1 0 9.9 ± 1.9 42 ± 16 -4.9
1.1.06.01. Cytochrome bc1, bacterial, structure 2 5kkz Rhodobacter sphaeroides Bact. Gram-neg inner 5 19 32.0 ± 1.0 2 ± 0 -195.4
1.1.06.01. Cytochrome bc1, bacterial, structure 3 5kli Rhodobacter sphaeroides Bact. Gram-neg inner 6 20 29.8 ± 1.6 0 ± 0 -180.0
1.2.12.01. Fimbrial protein, type IV pilin, assembly 5kua Neisseria meningitidis Bact. Gram-neg inner 3 3 36.4 ± 1.6 31 ± 1 -53.4
1.1.10.01. Heme importer BhuUV 5b57 Burkholderia cepacia Bact. Gram-neg inner 2 20 28.6 ± 0.8 1 ± 1 -85.4
1.1.10.01. Heme importer BhuUV, with BhuT protein 5b58 Burkholderia cepacia Bact. Gram-neg inner 2 20 29.0 ± 1.0 0 ± 0 -81.6
1.1.37.01. Divalent metal cation transporter MntH 5kte Deinococcus radiodurans Bact. Gram-neg inner 1 11 29.8 ± 0.8 7 ± 1 -63.3
1.1.66.01. K(+)-pumping pyrophosphatase, structure 3 5lzq Thermotoga maritima Bact. Gram-neg inner 2 32 31.0 ± 0.6 0 ± 0 -185.6
1.1.30.01. Membrane protein insertase YidC, structure 2 5m5h Escherichia coli Bact. Gram-neg inner 1 5 30.2 ± 2.2 18 ± 1 -41.3
1.3.20.01. SusD-SusC complex, BT_2263, a dimer 5fq6 Bacteroides thetaiotaomicron Bact. Gram-neg inner 2 44 26.6 ± 2.2 0 ± 0 -142.4
1.1.15.02. Proton-gated ion channel, conformation 8 5l4h Gloeobacter violaceus Bact. Gram-neg inner 5 20 31.8 ± 1.4 0 ± 1 -175.1
1.1.11.01. Holo-translocon 5mg3 Escherichia coli Bact. Gram-neg inner 6 29 30.6 ± 0.8 5 ± 0 -123.2
1.1.38.02. Lipid II flippase MurJ, inward-facing conformation 5t77 Thermosipho africanus Bact. Gram-neg inner 1 14 30.6 ± 1.4 3 ± 0 -124.8
1.1.104.01. Trimeric intracellular cation channel 5h36 Rhodobacter sphaeroides Bact. Gram-neg inner 3 21 31.0 ± 1.0 0 ± 0 -124.3
1.1.56.01. Lipooligosaccharide phosphoethanolamine transferase A (EptA) 5fgn Neisseria meningitidis Bact. Gram-neg inner 1 5 27.8 ± 1.4 35 ± 0 -53.8
1.1.21.01. CorA magnesium transporter, complete loops, structure 3 5jrw Thermotoga maritima Bact. Gram-neg inner 5 10 31.0 ± 0.6 0 ± 0 -80.2
1.1.10.07. Heterodimeric ABC transporter TmrAB 5mkk Thermus thermophilus Bact. Gram-neg inner 2 12 31.0 ± 0.6 5 ± 0 -78.8
1.1.10.03. Type-1 secretion system ABC transporter (HlyB-like) 5l22 Aquifex aeolicus Bact. Gram-neg inner 2 12 33.0 ± 1.4 1 ± 0 -111.8
1.1.15.02. Proton-gated ion channel, conformation 9 5j0z Gloeobacter violaceus Bact. Gram-neg inner 5 20 32.2 ± 1.4 0 ± 0 -171.9
2.2.07.01. Lipocalin BcnB 5ixg Burkholderia cepacia Bact. Gram-neg inner 1 0 2.0 ± 1.0 36 ± 5 -3.9
2.2.07.01. Lipocalin BcnA 5ixh Burkholderia cepacia Bact. Gram-neg inner 1 0 1.4 ± 2.6 28 ± 29 -1.7
1.1.108.01. ABC transporter LptB2FG 5x5y Pseudomonas aeruginosa Bact. Gram-neg inner 2 12 31.0 ± 0.6 5 ± 1 -104.8
1.1.12.01. Voltage-gated sodium channel NavAb, structure 4 (closed) 5vb2 Arcobacter butzleri Bact. Gram-neg inner 4 24 31.0 ± 0.8 0 ± 0 -228.1
1.1.12.01. Voltage-gated sodium channel NavAb, structure 5 (open) 5vb8 Arcobacter butzleri Bact. Gram-neg inner 4 24 31.4 ± 0.8 0 ± 0 -229.5
1.1.39.04. CbiMQO-complex 5x3x Rhodobacter capsulatus Bact. Gram-neg inner 2 8 30.2 ± 1.0 9 ± 0 -52.8
1.1.28.01. Multidrug efflux transporter AcrB-AcrZ complex, structure 2 5nc5 Escherichia coli Bact. Gram-neg inner 6 39 29.8 ± 0.6 1 ± 0 -215.8
1.1.12.01. Cyclic nucleotide-gated ion Channel 5v4s Leptospira licerasiae Bact. Gram-neg inner 4 24 31.0 ± 0.2 0 ± 0 -223.4
1.1.65.01. Concentrative nucleoside transporter, intermediate 2 state 5l24 Neisseria wadsworthii Bact. Gram-neg inner 3 24 26.6 ± 1.2 5 ± 0 -163.9
1.1.65.01. Concentrative nucleoside transporter, intermediate 1 state 5l27 Neisseria wadsworthii Bact. Gram-neg inner 3 24 27.8 ± 1.2 2 ± 0 -166.9
1.1.65.01. Concentrative nucleoside transporter, inward-facing state 5l26 Neisseria wadsworthii Bact. Gram-neg inner 3 24 29.0 ± 0.4 0 ± 0 -168.2
1.1.65.01. Concentrative nucleoside transporter, intermediate 3 state 5u9w Neisseria wadsworthii Bact. Gram-neg inner 3 24 29.0 ± 0.2 2 ± 0 -155.3
1.1.65.01. Concentrative nucleoside transporter, outward-facing state 5l2a Neisseria wadsworthii Bact. Gram-neg inner 3 24 27.8 ± 0.6 0 ± 0 -164.7
1.3.01.01. Outer membrane protein A (OMPA), disordered loops 1qjp Escherichia coli Bact. Gram-neg outer 1 8 25.4 ± 1.5 11 ± 1 -29.5
1.3.01.02. Outer membrane protein X (OMPX) 1qj8 Escherichia coli Bact. Gram-neg outer 1 8 23.6 ± 2.8 12 ± 5 -30.7
1.3.02.01. Outer membrane protein NspA 1p4t Neisseria meningitidis Bact. Gram-neg outer 1 8 24.9 ± 2.4 22 ± 3 -42.9
1.3.07.01. Plasminogen activator PLA (coagulase/fibrinolysin) 2x55 Yersinia pestis Bact. Gram-neg outer 1 10 25.6 ± 1.9 4 ± 5 -43.9
1.3.08.01. Outer membrane adhesin/invasin OpcA 1k24 Neisseria meningitidis Bact. Gram-neg outer 1 10 25.4 ± 1.3 10 ± 11 -41.7
1.3.11.01. Autotransporter NalP 1uyn Neisseria meningitidis Bact. Gram-neg outer 1 12 25.3 ± 1.3 8 ± 8 -47.6
1.3.12.01. Outer membrane phospholipase A, dimer 1qd6 Escherichia coli Bact. Gram-neg outer 2 24 23.9 ± 1.0 0 ± 0 -77.2
1.3.13.01. Bacterial Nucleoside Transporter Ts 1tly Escherichia coli Bact. Gram-neg outer 1 12 23.4 ± 1.5 8 ± 0 -48.1
1.3.14.01. Fatty Acid Transporter FadL 1t16 Escherichia coli Bact. Gram-neg outer 1 14 25.4 ± 1.3 6 ± 7 -58.0
1.3.16.01. Porin OmpF 3pox Escherichia coli Bact. Gram-neg outer 3 48 24.0 ± 0.8 0 ± 0 -136.2
1.3.16.01. Outer membrane protein C 1osm Klebsiella pneumoniae Bact. Gram-neg outer 3 48 24.0 ± 1.1 0 ± 0 -136.6
1.3.16.01. Anion-selective porin 2fgq Comamonas acidovorans Bact. Gram-neg outer 3 48 25.0 ± 0.9 0 ± 0 -130.8
1.3.16.02. Porin 2por Rhodobacter capsulatus Bact. Gram-neg outer 3 48 23.4 ± 0.6 0 ± 0 -114.8
1.3.16.02. Porin 3prn Rhodopseudomonas blastica Bact. Gram-neg outer 3 48 23.2 ± 0.5 0 ± 0 -127.6
1.3.18.01. Maltoporin 1af6 Escherichia coli Bact. Gram-neg outer 3 54 25.1 ± 0.7 0 ± 0 -117.9
1.3.18.01. Maltoporin 2mpr Salmonella enterica Bact. Gram-neg outer 3 54 24.5 ± 1.0 0 ± 0 -109.7
1.3.18.01. Sucrose-specific porin 1a0s Salmonella enterica Bact. Gram-neg outer 3 54 23.8 ± 1.1 0 ± 0 -103.5
1.3.20.01. Ferric hydroxamate uptake receptor FhuA 1qfg Escherichia coli Bact. Gram-neg outer 1 22 24.7 ± 1.0 5 ± 1 -81.3
1.3.20.01. Ferric enterobactin receptor FepA 1fep Escherichia coli Bact. Gram-neg outer 1 22 24.3 ± 1.1 1 ± 0 -77.2
1.3.20.01. Outer membrane transporter FecA 1kmo Escherichia coli Bact. Gram-neg outer 1 22 24.5 ± 1.2 3 ± 0 -69.6
1.3.20.01. Outer membrane cobalamin transporter BtuB 1nqe Escherichia coli Bact. Gram-neg outer 1 22 23.4 ± 1.0 5 ± 0 -68.8
1.3.20.01. Pyoverdine Outer Membrane Receptor FpvA 2iah Pseudomonas aeruginosa Bact. Gram-neg outer 1 22 24.0 ± 0.5 8 ± 0 -79.7
1.3.24.01. Outer membrane protein TolC 1ek9 Escherichia coli Bact. Gram-neg outer 3 12 24.6 ± 1.4 0 ± 2 -56.1
1.3.24.01. Multidrug Resistance (VceC) protein 1yc9 Vibrio cholerae Bact. Gram-neg outer 3 12 24.6 ± 1.0 0 ± 0 -62.2
1.3.24.01. Drug-Discharge Outer Membrane Protein, OprM 1wp1 Pseudomonas aeruginosa Bact. Gram-neg outer 3 12 24.7 ± 1.2 0 ± 0 -64.0
1.3.21.01. P pilus usher PapC translocation domain 2vqi Escherichia coli Bact. Gram-neg outer 1 24 23.1 ± 1.0 3 ± 0 -61.0
2.2.06.01. Outer membrane lipoprotein Blc 1qwd Escherichia coli Bact. Gram-neg outer 1 0 3.2 ± 2.0 80 ± 15 -4.6
1.3.07.01. Outer membrane protease OmpT 1i78 Escherichia coli Bact. Gram-neg outer 1 10 26.5 ± 1.6 5 ± 6 -46.9
1.3.20.01. Fe(III)-pyochelin receptor FptA 1xkw Pseudomonas aeruginosa Bact. Gram-neg outer 1 22 24.8 ± 1.0 5 ± 4 -84.3
1.3.16.01. Phosphoporin (PhoE) 1pho Escherichia coli Bact. Gram-neg outer 3 48 24.1 ± 1.2 0 ± 0 -134.1
1.3.03.01. Outer membrane protein W 2f1v Escherichia coli Bact. Gram-neg outer 1 8 25.4 ± 1.4 10 ± 3 -38.3
2.1.12.01. Outer surface protein C 1g5z Borrelia burgdorferi Bact. Gram-neg outer 2 0 3.6 ± 0.6 2 ± 8 -7.0
1.2.26.01. Outer membrane lipoprotein Wza, water-soluble part 2w8h Escherichia coli Bact. Gram-neg outer 8 0 1.6 ± 0.2 1 ± 0 -22.1
1.3.04.03. Lipid A acylase PagP 3gp6 Escherichia coli Bact. Gram-neg outer 1 8 24.7 ± 1.5 40 ± 1 -32.5
1.3.19.02. Alginate export protein, AlgE, conformation 1 3rbh Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 23.4 ± 1.2 4 ± 0 -72.0
1.2.54.01. Dihydroorotate dehydrogenase 1f76 Escherichia coli Bact. Gram-neg outer 1 0 3.7 ± 0.8 24 ± 8 -8.7
1.3.21.01. Outer membrane usher protein FimD, complex with FimC-FimF-FimG-FimH 4j3o Escherichia coli Bact. Gram-neg outer 1 24 23.8 ± 1.4 1 ± 1 -52.9
1.3.20.01. Outer membrane transporter FecA, different conformation 1kmp Escherichia coli Bact. Gram-neg outer 1 22 24.9 ± 0.9 4 ± 0 -74.0
1.3.11.01. Autotransporter NalP, different conformation 1uyo Neisseria meningitidis Bact. Gram-neg outer 1 12 23.6 ± 1.4 8 ± 0 -42.7
1.3.05.01. Lipid A deacylase PagL 2erv Pseudomonas aeruginosa Bact. Gram-neg outer 1 8 24.7 ± 1.8 20 ± 2 -41.1
1.3.02.01. Outer membrane protein H (OprH) 2lhf Pseudomonas aeruginosa Bact. Gram-neg outer 1 8 20.6 ± 0.6 15 ± 3 -16.4
1.3.23.01. Autotransporter Hia, 992-1098 2gr7 Haemophilus influenzae Bact. Gram-neg outer 3 12 22.7 ± 2.0 0 ± 1 -43.5
1.3.20.01. Ferric hydroxamate uptake receptor FhuA, complex with TonB 2grx Escherichia coli Bact. Gram-neg outer 1 22 24.6 ± 1.1 3 ± 0 -77.2
1.3.20.01. Outer membrane cobalamin transporter BtuB, complex with TonB 2gsk Escherichia coli Bact. Gram-neg outer 1 22 23.4 ± 0.7 5 ± 0 -77.5
1.3.15.01. Outer membrane protein G (OMPG), open state 1 2iwv Escherichia coli Bact. Gram-neg outer 1 14 25.3 ± 1.4 3 ± 5 -61.3
1.3.15.01. Outer membrane protein G (OMPG), closed state 2iww Escherichia coli Bact. Gram-neg outer 1 14 24.7 ± 1.4 6 ± 4 -63.3
1.3.16.01. Osmoporin OMPC 2j1n Escherichia coli Bact. Gram-neg outer 3 48 25.1 ± 1.2 0 ± 2 -126.2
1.2.26.01. Outer membrane lipoprotein Wza 2j58 Escherichia coli Bact. Gram-neg outer 8 8 31.1 ± 0.8 0 ± 0 -123.8
1.3.16.03. Porin OprP 2o4v Pseudomonas aeruginosa Bact. Gram-neg outer 3 48 23.9 ± 1.1 0 ± 0 -129.6
1.3.20.01. Colicin I receptor complex with binding domain of Colicin Ia 2hdi Escherichia coli Bact. Gram-neg outer 1 22 23.4 ± 0.9 3 ± 3 -72.7
1.3.20.01. Colicin I receptor 2hdf Escherichia coli Bact. Gram-neg outer 1 22 23.4 ± 0.9 4 ± 0 -70.9
1.3.16.01. Osmoporin OMPC, isoform 1 2ixx Escherichia coli Bact. Gram-neg outer 3 48 26.2 ± 1.3 0 ± 1 -142.5
1.3.16.01. Osmoporin OMPC, isoform 2 2ixw Escherichia coli Bact. Gram-neg outer 3 48 24.5 ± 1.0 0 ± 0 -121.0
1.3.19.01. Outer membrane porin OprD 2odj Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 23.0 ± 0.8 8 ± 0 -63.1
1.3.11.01. Serine protease EspP, post-cleavage structure 2qom Escherichia coli Bact. Gram-neg outer 1 12 25.1 ± 1.6 6 ± 7 -55.9
1.3.20.01. Outer membrane cobalamin transporter BtuB, meso form 2guf Escherichia coli Bact. Gram-neg outer 1 22 23.4 ± 0.9 6 ± 7 -69.3
1.3.14.01. Toluene transporter TbuX 3bry Ralstonia pickettii Bact. Gram-neg outer 1 14 25.4 ± 1.5 1 ± 2 -57.7
1.3.14.01. Toluene transporter TodX 3bs0 Pseudomonas putida Bact. Gram-neg outer 1 14 23.4 ± 1.4 7 ± 7 -61.3
1.3.19.01. Protein OpdK 2qtk Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 23.3 ± 1.0 3 ± 0 -62.4
1.2.38.03. Endo-type membrane-bound lytic murein transglycosylase A 2y8p Escherichia coli Bact. Gram-neg outer 1 0 0.0 ± 3.6 86 ± 15 -2.2
1.3.23.01. Autotransporter Hia, 937-1098, a different conformation 3emo Haemophilus influenzae Bact. Gram-neg outer 3 12 22.8 ± 1.9 4 ± 0 -40.1
1.3.14.01. FadL homologue 3dwo Pseudomonas aeruginosa Bact. Gram-neg outer 1 14 24.8 ± 1.6 6 ± 3 -54.7
1.3.06.01. Major outer membrane protein TtoA 3dzm Thermus thermophilus Bact. Gram-neg outer 1 8 28.5 ± 2.6 6 ± 10 -50.3
1.3.01.01. Outer membrane protein A from Klebsiella 2k0l Klebsiella pneumoniae Bact. Gram-neg outer 1 8 24.3 ± 2.3 18 ± 6 -26.8
1.3.20.01. Hemophore receptor HasR, structure 1 3csl Serratia marcescens Bact. Gram-neg outer 1 22 25.4 ± 1.3 4 ± 5 -72.2
1.3.09.01. Lipid A deacylase LpxR 3fid Salmonella enterica Bact. Gram-neg outer 1 12 25.6 ± 2.0 24 ± 0 -58.6
1.3.20.01. Outer membrane receptor FauA 3efm Bordetella pertussis Bact. Gram-neg outer 1 22 24.7 ± 0.6 11 ± 0 -77.5
1.3.20.01. Outer membrane heme transporter ShuA 3fhh Shigella dysenteriae Bact. Gram-neg outer 1 22 24.6 ± 0.9 5 ± 0 -70.7
1.3.10.01. Acidic sugar-specific porin NanC 2wjr Escherichia coli Bact. Gram-neg outer 1 12 23.3 ± 1.5 4 ± 4 -47.5
1.3.19.01. BenF-like porin 3jty Pseudomonas fluorescens Bact. Gram-neg outer 1 18 24.2 ± 1.2 1 ± 0 -59.8
1.3.20.01. Outer membrane cobalamin transporter BtuB, complex with colicin E2 R-domain 2ysu Escherichia coli Bact. Gram-neg outer 1 22 24.2 ± 1.0 5 ± 0 -75.2
1.3.20.01. Outer membrane cobalamin transporter BtuB, complex with colicin E3 R-domain 1ujw Escherichia coli Bact. Gram-neg outer 1 22 23.6 ± 1.1 5 ± 0 -71.5
1.3.11.01. Esterase EstA 3kvn Pseudomonas aeruginosa Bact. Gram-neg outer 1 12 24.4 ± 1.5 4 ± 2 -48.7
1.3.16.01. Porin B (PorB) 3a2s Neisseria meningitidis Bact. Gram-neg outer 3 48 24.4 ± 1.0 0 ± 0 -102.1
1.3.11.01. Hemoglobin-binding protease Hbp autotransporter 3aeh Escherichia coli Bact. Gram-neg outer 1 12 25.2 ± 1.1 4 ± 0 -41.9
1.1.73.01. Outer membrane complex of type IV secretion system (VirB7/VirB9/VirB10 complex) 3jqo Escherichia coli Bact. Gram-neg outer 14 14 22.6 ± 0.6 0 ± 0 -67.4
1.1.73.01. TrbI protein 2bhv Helicobacter pylori Bact. Gram-neg outer 1 0 3.1 ± 1.3 42 ± 11 -6.4
1.3.12.01. Outer membrane phospholipase A, monomer 1qd5 Escherichia coli Bact. Gram-neg outer 1 12 24.6 ± 1.2 6 ± 0 -52.6
1.3.20.01. Outer membrane cobalamin transporter BtuB, with cyanocobalamin 3m8d Escherichia coli Bact. Gram-neg outer 1 22 23.3 ± 0.8 6 ± 1 -70.5
1.3.15.01. Outer membrane protein G (OMPG), open state 2 2x9k Escherichia coli Bact. Gram-neg outer 1 14 24.7 ± 1.2 5 ± 2 -62.7
1.3.03.01. Outer membrane protein OprG 2x27 Pseudomonas aeruginosa Bact. Gram-neg outer 1 8 23.9 ± 1.7 7 ± 3 -39.6
1.3.24.01. Cation efflux system protein CusC 3pik Escherichia coli Bact. Gram-neg outer 3 12 24.3 ± 1.2 1 ± 0 -33.8
1.3.11.01. Autotransporter BrkA 3qq2 Bordetella pertussis Bact. Gram-neg outer 1 12 24.6 ± 1.5 4 ± 1 -44.1
2.3.10.05. 3-Deoxy-D-manno-octulosonic-acid transferase, WaaA 2xci Aquifex aeolicus Bact. Gram-neg outer 1 0 8.3 ± 1.5 72 ± 1 -20.3
2.1.07.01. Decaheme cytochrome c MtrF 3pmq Shewanella oneidensis Bact. Gram-neg outer 1 0 3.9 ± 0.9 86 ± 2 -6.2
1.3.21.01. Outer membrane usher protein FimD 3ohn Escherichia coli Bact. Gram-neg outer 1 24 21.2 ± 1.1 5 ± 0 -45.4
1.3.21.01. Outer membrane usher protein FimD, complex with FimC-FimH 3rfz Escherichia coli Bact. Gram-neg outer 1 24 23.8 ± 0.8 5 ± 0 -65.1
1.3.16.01. Porin OmpF 3nsg Salmonella enterica Bact. Gram-neg outer 3 48 23.6 ± 0.8 0 ± 0 -123.4
2.2.23.01. Lipoprotein BamB, conformation 1 3prw Escherichia coli Bact. Gram-neg outer 1 0 5.1 ± 1.2 81 ± 7 -8.5
1.3.17.02. BamCD lipoprotein complex 3tgo Escherichia coli Bact. Gram-neg outer 2 0 3.7 ± 2.1 81 ± 20 -3.3
1.3.11.01. Serine protease EspP, pre-cleavage structure 3slj Escherichia coli Bact. Gram-neg outer 1 12 25.4 ± 1.2 6 ± 1 -53.1
2.2.45.01. Outer membrane protein IcsA autotransporter 3ml3 Shigella flexneri Bact. Gram-neg outer 1 0 3.4 ± 0.5 65 ± 2 -6.2
2.2.45.01. Pertactin, complex with phage tail protein 2iou Bordetella bronchiseptica Bact. Gram-neg outer 4 0 3.9 ± 1.2 82 ± 2 -8.2
2.2.45.01. Pertactin autotransporter 1dab Bordetella pertussis Bact. Gram-neg outer 1 0 2.6 ± 1.1 73 ± 6 -5.9
1.3.01.02. Attachment invasion locus protein 3qra Yersinia pestis Bact. Gram-neg outer 1 8 25.2 ± 1.4 14 ± 7 -32.2
1.3.01.02. Attachment invasion locus protein, complex with the heparin analogue 3qrc Yersinia pestis Bact. Gram-neg outer 1 8 24.6 ± 1.2 7 ± 5 -31.6
2.2.07.02. Factor H binding protein 1ys5 Neisseria meningitidis Bact. Gram-neg outer 1 0 3.5 ± 2.6 84 ± 5 -5.6
1.3.20.01. Enantio-pyochelin receptor FetA 3qlb Pseudomonas fluorescens Bact. Gram-neg outer 1 22 23.4 ± 0.8 7 ± 0 -75.3
1.3.19.01. Outer membrane porin OpdL 2y0h Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 23.0 ± 1.0 3 ± 0 -55.7
1.3.19.01. Pyroglutamate porin OpdO 2y0k Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 23.8 ± 1.2 1 ± 0 -55.8
1.3.19.01. Cis-aconitate porin OpdH 2y0l Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 21.4 ± 1.5 6 ± 1 -57.2
2.2.23.01. Lipoprotein BamB, conformation 2 3p1l Escherichia coli Bact. Gram-neg outer 1 0 3.6 ± 2.8 89 ± 10 -6.4
2.1.08.01. Quinohemoprotein alcohol dehydrogenase ADH IIB 1kv9 Pseudomonas putida Bact. Gram-neg outer 1 0 1.7 ± 1.1 77 ± 22 -5.9
2.2.21.04. Cytolethal distending toxin complex 1sr4 Haemophilus ducreyi Bact. Gram-neg outer 3 0 1.8 ± 1.5 34 ± 7 -5.0
1.3.19.03. MOMP porin 5ldv Campylobacter jejuni Bact. Gram-neg outer 3 54 25.4 ± 0.6 0 ± 0 -125.2
1.3.19.01. Histidine porin OpdC 3sy9 Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 23.4 ± 0.8 5 ± 0 -63.2
1.3.19.01. Glycine-glutamate dipeptide porin OpdP 3syb Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 23.6 ± 0.9 8 ± 0 -62.0
1.3.19.01. Porin OpdF 3szd Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 22.0 ± 1.6 3 ± 0 -60.3
1.3.19.01. Porin OpdQ 3t24 Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 23.0 ± 1.3 2 ± 0 -56.5
1.3.20.01. Transferrin-binding protein A, complex with human serotransferrin 3v89 Neisseria meningitidis Bact. Gram-neg outer 1 22 22.8 ± 0.8 3 ± 1 -68.9
1.3.20.01. Transferrin-binding protein A, complex with full-length transferrin 3v8x Neisseria meningitidis Bact. Gram-neg outer 1 22 23.2 ± 0.6 3 ± 0 -66.6
1.3.11.02. Intimin 4e1s Escherichia coli Bact. Gram-neg outer 1 12 24.4 ± 1.6 9 ± 2 -45.2
1.3.11.02. Invasin 4e1t Yersinia pseudotuberculosis Bact. Gram-neg outer 1 12 25.6 ± 1.4 9 ± 1 -51.0
1.3.20.01. Pesticin receptor FyuA 4epa Yersinia pestis Bact. Gram-neg outer 1 22 23.6 ± 0.8 3 ± 0 -73.5
1.3.16.01. Porin B (PorB) 4aui Neisseria gonorrhoeae Bact. Gram-neg outer 3 48 24.2 ± 0.8 0 ± 0 -89.7
1.3.16.04. Porin B 4gey Pseudomonas putida Bact. Gram-neg outer 1 16 24.2 ± 1.6 6 ± 2 -61.3
1.3.16.04. Porin B, low pH structure 4gf4 Pseudomonas putida Bact. Gram-neg outer 1 16 22.4 ± 1.1 5 ± 2 -54.3
1.3.23.01. Adhesin yadA 2lme Yersinia enterocolitica Bact. Gram-neg outer 3 15 23.4 ± 2.2 0 ± 1 -37.7
1.3.16.01. Osmoporin OMPC 3upg Salmonella typhimurium Bact. Gram-neg outer 3 48 23.4 ± 0.7 0 ± 0 -118.0
1.3.20.01. Fe-regulated protein B 4aip Neisseria meningitidis Bact. Gram-neg outer 3 66 23.4 ± 0.3 0 ± 0 -144.6
1.3.20.01. Fe-regulated protein B, different variant 4aiq Neisseria meningitidis Bact. Gram-neg outer 1 22 23.6 ± 0.9 6 ± 0 -69.7
1.3.19.02. Alginate export protein, AlgE, conformation 2 4afk Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 24.8 ± 0.9 3 ± 0 -73.0
2.2.50.01. Lipoprotein TP0453, open conformation 3k8i Treponema pallidum Bact. Gram-neg outer 1 0 8.9 ± 2.4 38 ± 2 -12.0
1.3.01.01. Outer membrane protein A (OMPA) 1bxw Escherichia coli Bact. Gram-neg outer 1 8 25.4 ± 1.9 5 ± 1 -35.6
1.3.04.03. Lipid A acylase PagP, different conformation of loops 1thq Escherichia coli Bact. Gram-neg outer 1 8 23.4 ± 2.5 27 ± 3 -31.3
1.3.08.01. Outer membrane adhesin/invasin OpcA, disordered loops 2vdf Neisseria meningitidis Bact. Gram-neg outer 1 10 24.8 ± 1.2 8 ± 0 -47.0
1.3.07.01. Plasminogen activator PLA (coagulase/fibrinolysin), disordered loop 2x4m Yersinia pestis Bact. Gram-neg outer 10 10 24.2 ± 1.6 2 ± 2 -46.1
1.3.14.01. Fatty Acid Transporter FadL, D348R, open channel 3pgr Escherichia coli Bact. Gram-neg outer 1 14 25.4 ± 1.4 3 ± 1 -50.8
1.3.14.01. Fatty Acid Transporter FadL, F3E, open channel 3pgu Escherichia coli Bact. Gram-neg outer 1 14 25.2 ± 1.5 1 ± 1 -51.5
1.3.14.01. Fatty Acid Transporter FadL, delS3, open channel 2r88 Escherichia coli Bact. Gram-neg outer 1 14 24.0 ± 1.4 6 ± 2 -53.8
1.3.24.01. Outer membrane protein TolC, mutant, open conformation 1 2wmz Escherichia coli Bact. Gram-neg outer 3 12 24.4 ± 0.8 0 ± 0 -52.8
1.3.24.01. Outer membrane protein TolC, mutant, open conformation 2 2vde Escherichia coli Bact. Gram-neg outer 3 12 24.4 ± 1.2 0 ± 0 -57.4
1.3.24.01. Outer membrane protein TolC, mutant, open conformation 3 2vdd Escherichia coli Bact. Gram-neg outer 3 12 24.4 ± 1.2 0 ± 0 -57.7
1.3.24.01. Outer membrane protein TolC, mutant, open conformation 4 2xmn Escherichia coli Bact. Gram-neg outer 3 12 23.6 ± 1.4 0 ± 0 -50.5
1.3.17.01. Filamentous hemagglutinin transporter FhaC, structure 1 3njt Bordetella pertussis Bact. Gram-neg outer 1 16 23.6 ± 0.9 7 ± 0 -65.8
1.3.19.01. Outer membrane porin OprD, different conformation of loops 3sy7 Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 23.8 ± 1.1 4 ± 2 -63.5
2.2.50.01. Lipoprotein TP0453, closed conformation 3k8g Treponema pallidum Bact. Gram-neg outer 1 0 6.9 ± 2.8 46 ± 7 -8.5
2.2.50.01. Lipoprotein TP0453, intermediate conformation 3k8j Treponema pallidum Bact. Gram-neg outer 1 0 5.4 ± 1.4 33 ± 6 -9.9
1.3.27.01. Capsule assembly protein Wzi 2ynk Escherichia coli Bact. Gram-neg outer 1 18 23.8 ± 1.3 6 ± 1 -58.2
1.3.10.01. Oligogalacturonate-specific porin KdgM 4fqe Dickeya dadantii Bact. Gram-neg outer 1 12 22.2 ± 1.5 2 ± 1 -42.1
1.3.06.02. Carbapenem-associated resistance porin CarO3 4fuv Acinetobacter baumannii Bact. Gram-neg outer 1 8 25.0 ± 2.3 3 ± 1 -38.5
1.3.19.02. Alginate export protein, AlgE, conformation 3 4b61 Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 24.0 ± 1.1 5 ± 1 -73.2
1.3.19.01. Porin OprdG 4ft6 Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 23.4 ± 1.4 4 ± 0 -62.4
1.3.19.01. Porin OprdD 4frt Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 20.4 ± 1.4 5 ± 1 -48.5
1.3.19.01. Porin OprE 4frx Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 22.0 ± 1.5 6 ± 0 -55.3
1.3.19.01. Porin OpdN 4fso Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 21.8 ± 2.2 7 ± 1 -61.3
1.3.19.01. Porin OpdR 4fsp Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 22.6 ± 1.2 3 ± 0 -59.6
1.3.17.02. Outer membrane protein assembly factor BamA 4k3c Haemophilus ducreyi Bact. Gram-neg outer 1 16 23.4 ± 1.0 10 ± 0 -63.3
1.3.17.02. Outer membrane protein assembly factor BamA 4k3b Neisseria gonorrhoeae Bact. Gram-neg outer 1 16 23.0 ± 1.1 9 ± 0 -52.6
1.3.17.02. Translocation and assembly module TamA 4c00 Escherichia coli Bact. Gram-neg outer 1 16 23.4 ± 1.3 7 ± 1 -52.2
2.4.43.01. Cell wall anchor protein of the T6SS system 4b62 Pseudomonas aeruginosa Bact. Gram-neg outer 1 0 2.8 ± 2.5 46 ± 36 -4.6
1.3.16.01. Porin B (PorB), different strain 3wi4 Neisseria meningitidis Bact. Gram-neg outer 3 48 23.4 ± 0.6 0 ± 0 -112.6
1.3.16.01. Porin B (PorB), different strain, conformation 2 3wi5 Neisseria meningitidis Bact. Gram-neg outer 3 48 25.4 ± 0.9 0 ± 0 -117.2
1.3.24.01. Cation efflux system protein CusC, monomer 4k7k Escherichia coli Bact. Gram-neg outer 1 0 3.2 ± 0.9 85 ± 1 -7.2
2.2.23.01. Lipoprotein BamB, conformation 3 3q7o Escherichia coli Bact. Gram-neg outer 1 0 4.9 ± 1.5 69 ± 3 -6.9
1.3.17.02. Outer membrane protein assembly factor BamA 4n75 Escherichia coli Bact. Gram-neg outer 1 16 23.8 ± 0.8 11 ± 0 -61.1
1.3.20.01. Ferric hydroxamate uptake receptor FhuA, with microcin 4cu4 Escherichia coli Bact. Gram-neg outer 1 22 24.6 ± 1.1 5 ± 0 -77.7
1.3.17.02. Outer membrane protein assembly factor BamA 4c4v Escherichia coli Bact. Gram-neg outer 1 16 23.6 ± 1.0 10 ± 0 -65.1
2.1.61.01. Muramidase Tse3 4m5e Pseudomonas aeruginosa Bact. Gram-neg outer 1 0 5.2 ± 2.0 65 ± 10 -8.0
2.1.61.01. Muramidase Tse3-Tsi3 complex, conformation 1 4m5f Pseudomonas aeruginosa Bact. Gram-neg outer 2 0 3.4 ± 0.2 84 ± 3 -7.8
2.1.61.01. Muramidase Tse3-Tsi3 complex, conformation 2 4luq Pseudomonas aeruginosa Bact. Gram-neg outer 2 0 2.2 ± 1.4 69 ± 5 -8.2
2.1.61.01. Muramidase Tse3-Tsi3 complex, conformation 3 3wa5 Pseudomonas aeruginosa Bact. Gram-neg outer 2 0 4.5 ± 1.4 84 ± 7 -4.6
1.3.11.01. Diffuse adherence adhesin 4mee Escherichia coli Bact. Gram-neg outer 1 12 26.4 ± 2.4 5 ± 1 -46.6
1.3.02.01. Opacity protein opA60, structure 2 2mlh Neisseria gonorrhoeae Bact. Gram-neg outer 1 8 23.2 ± 2.7 13 ± 2 -30.2
1.3.28.01. LPS-assembly protein complex, LptE and LptD 4q35 Shigella flexneri Bact. Gram-neg outer 1 26 23.0 ± 0.7 6 ± 2 -70.5
1.3.28.01. LPS-assembly protein complex, LptE and LptD 4n4r Salmonella typhimurium Bact. Gram-neg outer 1 26 23.4 ± 1.5 4 ± 0 -80.4
1.3.03.01. Outer membrane protein W, NMR model 2mhl Escherichia coli Bact. Gram-neg outer 1 8 23.4 ± 1.8 17 ± 0 -25.7
1.3.24.01. MtrE protein 4mt0 Neisseria gonorrhoeae Bact. Gram-neg outer 3 12 25.0 ± 0.7 0 ± 0 -57.4
1.3.15.01. Outer membrane protein G (OMPG), with truncated extracellular loops 4ctd Escherichia coli Bact. Gram-neg outer 1 14 24.6 ± 1.3 3 ± 1 -55.6
1.3.24.01. Outer membrane channel CmeC 4mt4 Campylobacter jejuni Bact. Gram-neg outer 3 12 26.8 ± 0.4 0 ± 0 -67.1
1.3.29.01. Bacterial amyloid secretion channel CsgG, structure 2 4uv3 Escherichia coli Bact. Gram-neg outer 9 36 26.4 ± 0.9 0 ± 0 -84.6
1.3.17.01. Filamentous hemagglutinin transporter FhaC, structure 2 4ql0 Bordetella pertussis Bact. Gram-neg outer 1 16 23.2 ± 0.9 10 ± 0 -62.7
1.3.02.01. Opacity protein opA60, structure 1 2maf Neisseria gonorrhoeae Bact. Gram-neg outer 1 8 23.8 ± 1.0 20 ± 1 -34.2
1.3.29.01. Bacterial amyloid secretion channel CsgG, structure 1 4q79 Escherichia coli Bact. Gram-neg outer 9 36 25.6 ± 0.6 0 ± 0 -82.4
1.1.83.01. TspO protein, structure 1 4uc1 Rhodobacter sphaeroides Bact. Gram-neg outer 2 10 29.6 ± 1.3 1 ± 1 -70.6
1.1.83.01. TspO protein, structure 2 4uc2 Rhodobacter sphaeroides Bact. Gram-neg outer 2 10 30.4 ± 0.9 1 ± 0 -79.2
1.1.83.01. TspO protein, structure 3 4uc3 Rhodobacter sphaeroides Bact. Gram-neg outer 2 10 29.4 ± 1.5 2 ± 1 -67.1
1.3.01.03. Outer membrane porin F 4rlc Pseudomonas aeruginosa Bact. Gram-neg outer 1 8 24.2 ± 1.3 14 ± 2 -40.5
1.3.06.02. Carbapenem-associated resistance porin CarO1 4rl9 Acinetobacter baumannii Bact. Gram-neg outer 1 8 24.6 ± 1.5 3 ± 1 -38.3
1.3.06.02. Carbapenem-associated resistance porin CarO2 4rlb Acinetobacter baumannii Bact. Gram-neg outer 1 8 25.2 ± 1.6 4 ± 2 -33.7
1.3.19.02. Alginate export protein, AlgE, conformation 4 4xnk Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 24.4 ± 1.0 3 ± 0 -71.7
1.3.19.02. Alginate export protein, AlgE, conformation 5 4xnl Pseudomonas aeruginosa Bact. Gram-neg outer 1 18 25.2 ± 1.1 3 ± 0 -73.6
1.3.15.02. CymA protein, conformation 1 4d51 Klebsiella oxytoca Bact. Gram-neg outer 1 14 25.0 ± 1.7 2 ± 1 -44.8
1.3.15.02. CymA protein, conformation 2 4d5b Klebsiella oxytoca Bact. Gram-neg outer 1 14 23.4 ± 1.0 3 ± 1 -48.7
1.3.15.02. CymA protein, conformation 3 4v3g Klebsiella oxytoca Bact. Gram-neg outer 1 14 23.4 ± 1.5 3 ± 3 -45.0
1.3.30.01. Phenol degradation pathway involved protein 4rl8 Pseudomonas putida Bact. Gram-neg outer 1 12 23.4 ± 1.1 6 ± 1 -47.9
1.3.20.01. Bacterial Zn-transporter ZnuD, structure 1 4rdr Neisseria meningitidis Bact. Gram-neg outer 1 22 23.2 ± 0.9 2 ± 0 -70.1
1.3.20.01. Bacterial Zn-transporter ZnuD, structure 2 4rdt Neisseria meningitidis Bact. Gram-neg outer 1