PDB ID or protein name

Bos taurus (64 proteins)

Family Protein Name PDB ID Localization Num. Subunits Num. TM Sec. Structs. Hydrophobic Thickness or Depth (Å) Tilt Angle (°) ΔGtransfer (kcal/mol)
1.1.01.02. Rhodopsin, inactive, complex with inverse agonist, 11-cis retinal 1gzm Eukaryo. plasma 1 7 32.2 ± 1.5 11 ± 1 -75.6
1.1.01.02. Rhodopsin, partially active, photobleached 2i37 Eukaryo. plasma 1 7 31.9 ± 1.5 5 ± 1 -79.1
1.1.01.02. Rhodopsin, active (metarhodopsin II), without transducin peptide, dimer 3pxo Eukaryo. plasma 2 14 31.8 ± 1.2 0 ± 0 -125.4
1.1.01.02. Rhodopsin, active (metarhodopsin II), complex with peptide of transducin 3pqr Eukaryo. plasma 1 7 31.8 ± 1.1 9 ± 1 -78.3
1.1.14.01. Aquaporin-1 1j4n Eukaryo. plasma 4 32 31.8 ± 1.0 0 ± 0 -129.2
1.1.14.01. Aquaporin-0 1ymg Eukaryo. plasma 4 32 31.3 ± 1.2 0 ± 0 -138.4
1.1.17.02. Urea transporter 1 4ezc Eukaryo. plasma 3 30 31.2 ± 0.6 0 ± 0 -138.8
1.1.01.02. Rhodopsin, inactive, conformation 3 1u19 Eukaryo. plasma 1 7 31.2 ± 1.5 12 ± 1 -71.9
1.1.14.01. Aquaporin-0, open state 2b6p Eukaryo. plasma 4 32 31.1 ± 1.5 0 ± 1 -130.0
1.1.01.02. Rhodopsin, inactive, conformation 2 3oax Eukaryo. plasma 1 7 30.9 ± 1.4 11 ± 0 -73.6
1.1.01.02. Opsin, active, retinal-free state, dimer 3cap Eukaryo. plasma 2 14 30.8 ± 1.1 0 ± 0 -130.1
1.1.07.01. EM model of mitochondrial supercomplex 2ybb Mitochon. inner 26 115 30.0 ± 0.3 9 ± 0 -310.3
1.1.01.02. Rhodopsin, inactive state, a dimer 2i36 Eukaryo. plasma 2 14 30.0 ± 1.4 4 ± 4 -125.6
1.1.34.01. Mitochondrial ADP-ATP carrier, with carboxyatractyloside 2c3e Mitochon. inner 1 6 30.0 ± 1.0 4 ± 2 -44.0
1.1.01.02. Rhodopsin, constitutively active mutant (metarhodopsin II), dimer 2x72 Eukaryo. plasma 2 14 30.0 ± 0.6 0 ± 0 -132.0
1.1.06.01. Cytochrome bc1, mitochondrial 1l0l Mitochon. inner 12 26 30.0 ± 0.6 0 ± 0 -186.6
1.1.06.01. Cytochrome bc1, mitochondrial, different structure of complex 2 1pp9 Mitochon. inner 10 26 29.8 ± 0.3 6 ± 0 -179.3
1.1.06.01. Cytochrome bc1, mitochondrial, different structure of complex 1 2fyu Mitochon. inner 12 26 29.8 ± 0.5 0 ± 0 -182.9
1.1.06.01. Cytochrome bc1, mitochondrial, different structure of complex 3 2a06 Mitochon. inner 9 23 29.8 ± 0.3 2 ± 0 -166.2
1.1.34.01. Mitochondrial ADP-ATP carrier 1okc Mitochon. inner 1 6 29.5 ± 1.7 14 ± 1 -44.6
1.1.07.01. Mitochondrial cytochrome c oxidase 1v55 Mitochon. inner 20 56 27.8 ± 0.9 0 ± 0 -209.1
1.1.09.01. Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 3tlm Endoplasm. reticulum 1 10 26.8 ± 0.0 22 ± 0 -57.4
3.1.01.03. Major prion protein, segment 1-30 1skh Eukaryo. plasma 1 1 20.8 ± 6.3 9 ± 5 -10.7
2.2.31.01. Collagen-binding type II domain of seminal plasma protein PDC-109 1h8p Secreted 2 0 10.5 ± 0.9 87 ± 7 -16.6
2.2.12.01. Epididymal secretory protein E1 1nep Secreted 1 0 8.0 ± 1.4 73 ± 14 -4.6
2.2.04.01. Retinoid isomerohydrolase, conformation 1 3fsn Eukaryo. plasma 1 0 7.8 ± 1.0 73 ± 10 -10.3
3.1.29.01. Cathelicidin-6 2ket Secreted 1 0 7.1 ± 0.7 82 ± 3 -13.6
3.1.29.02. Indolicidin (cathelicidin-4), a cyclic analog 1qx9 Secreted 1 0 6.6 ± 1.9 46 ± 15 -7.7
2.2.06.02. Cellular retinoic acid-binding protein 1 1cbr Eukaryo. plasma 1 0 6.5 ± 1.1 45 ± 11 -5.4
2.2.41.01. Beta-defensin 12 1bnb Secreted 1 0 6.0 ± 1.6 88 ± 15 -10.8
1.2.32.01. Steroid 21-hydroxylase (P450 C21) 3qz1 Endoplasm. reticulum 1 0 5.9 ± 1.6 72 ± 3 -10.4
2.2.20.01. PH domain of GPCR kinase 2 2bcj Eukaryo. plasma 3 0 5.7 ± 1.5 85 ± 5 -10.4
2.3.06.01. Bile-salt activated lipase, conformation 1 1aql Secreted 1 0 5.7 ± 1.1 78 ± 7 -9.6
2.3.06.04. Palmitoyl protein thioesterase 1 1eh5 Lysosome 1 0 5.3 ± 0.9 59 ± 6 -8.1
2.3.06.01. Bile-salt activated lipase, conformation 3 2bce Secreted 1 0 5.3 ± 0.8 74 ± 6 -7.0
2.3.16.03. Transducin 1got Eukaryo. plasma 3 0 4.9 ± 1.2 61 ± 8 -7.0
2.2.06.02. Muscle fatty acid binding protein 1bwy Eukaryo. plasma 1 0 4.8 ± 1.3 71 ± 12 -6.6
3.2.01.08. Lactoferricin B, peptide 36-60 1lfc Secreted 1 0 4.6 ± 0.5 90 ± 6 -5.3
2.1.18.01. Annexin VI 1avc Eukaryo. plasma 1 0 4.4 ± 1.0 83 ± 1 -8.1
2.2.06.01. Retinol binding protein 1kt6 Secreted 1 0 4.3 ± 1.7 74 ± 12 -4.7
2.1.20.01. Prothrombin 1nl2 Eukaryo. plasma 1 0 3.9 ± 3.0 18 ± 24 -5.8
2.1.10.01. Glycolipid transfer protein, structure 1 1tfj Eukaryo. plasma 1 0 3.9 ± 1.0 90 ± 5 -8.3
2.3.06.01. Bile-salt activated lipase, conformation 2 1akn Secreted 1 0 3.8 ± 1.5 77 ± 15 -6.7
2.2.04.01. Retinoid isomerohydrolase, conformation 2 4f2z Eukaryo. plasma 1 0 3.7 ± 0.9 56 ± 2 -9.2
2.2.14.01. C2 domains of coagulation factor Va 1sdd Eukaryo. plasma 2 0 3.7 ± 2.0 35 ± 8 -8.7
2.2.04.01. Retinoid isomerohydrolase, conformation 3 4f30 Eukaryo. plasma 1 0 3.4 ± 1.4 61 ± 7 -10.9
1.2.32.01. Cholesterol side-chain cleavage enzyme (P450 11A1) 3mzs Mitochon. inner 1 0 3.2 ± 0.3 33 ± 1 -6.7
2.2.06.01. Allergen Bos d 2 1bj7 Secreted 1 0 3.1 ± 1.3 50 ± 6 -3.5
1.2.39.03. Disintegrin and metalloproteinase domain-containing protein 10 2ao7 Golgi 1 0 3.1 ± 1.4 81 ± 6 -5.7
3.2.01.08. Lactoferricin B, peptide 38-49 1y58 Secreted 1 0 2.9 ± 1.4 86 ± 18 -3.7
2.2.14.01. Lactadherin 3bn6 Secreted 1 0 2.8 ± 0.5 11 ± 4 -7.2
2.2.06.02. Myelin P2 protein 1pmp Eukaryo. plasma 1 0 2.7 ± 1.3 61 ± 13 -6.1
2.1.18.01. Annexin IV 1i4a Eukaryo. plasma 3 0 2.5 ± 1.1 89 ± 3 -7.7
2.2.37.01. Primary amine oxidase, liver isozyme 1tu5 Secreted 2 0 2.4 ± 1.2 89 ± 0 -6.1
2.3.05.02. Adrenodoxin reductase of mitochondrial p450 systems, complex with adrenodoxin 1e6e Mitochon. inner 2 0 2.3 ± 1.0 11 ± 2 -4.1
2.3.13.02. Phosducin/Transducin beta-gamma complex, conformation 1 1a0r Eukaryo. plasma 3 0 2.3 ± 1.0 50 ± 4 -7.4
2.1.18.01. Annexin IV, monomeric state 1ann Eukaryo. plasma 1 0 2.2 ± 1.0 77 ± 3 -6.0
2.4.10.01. Synapsin I 1auv Vesicle 1 0 1.9 ± 1.1 86 ± 11 -5.2
2.1.01.01. Phospholipase A2, group IB 1g4i Secreted 1 0 1.9 ± 0.5 87 ± 4 -7.4
3.4.09.01. Granin 1n2y Secreted 1 0 1.9 ± 2.1 71 ± 16 -3.4
3.1.11.01. Pancreatic hormone 1v1d Secreted 1 0 1.2 ± 3.0 79 ± 32 -1.9
2.1.10.01. Glycolipid transfer protein, structure 2 1wbe Eukaryo. plasma 1 0 1.1 ± 2.4 89 ± 8 -9.4
2.2.15.01. Gamma-crystallin F 1m8u Secreted 1 0 0.7 ± 1.2 85 ± 4 -4.9
2.2.06.01. Beta-lactoglobulin 3nq9 Secreted 1 0 0.5 ± 0.9 89 ± 4 -2.7