PDB ID or protein name

Danio rerio (15 proteins)

Family Protein Name PDB ID Localization Num. Subunits Num. TM Sec. Structs. Hydrophobic Thickness or Depth (Å) Tilt Angle (°) ΔGtransfer (kcal/mol)
1.1.01.02. Lysophosphatidic acid receptor 6a 5xsz Eukaryo. plasma 1 7 35.0 ± 0.6 11 ± 1 -83.2
1.1.10.08. Cystic fibrosis transmembrane conductance regulator, phosphorylated 5w81 Eukaryo. plasma 1 12 31.0 ± 1.0 6 ± 2 -82.2
1.1.10.08. Cystic fibrosis transmembrane conductance regulator, dephosphorylated 5uar Endosome 1 12 30.6 ± 0.8 0 ± 0 -81.7
1.1.102.01. STRA6 receptor, with calmodulin 5sy1 Eukaryo. plasma 2 18 30.8 ± 0.0 0 ± 0 -141.2
1.1.13.02. ATP-gated P2X4 ion channel, closed state 3h9v Eukaryo. plasma 3 6 27.6 ± 1.3 0 ± 1 -61.3
1.1.13.02. ATP-gated P2X4 ion channel, open state 4dw1 Eukaryo. plasma 3 6 26.8 ± 0.6 0 ± 0 -56.0
1.1.15.01. Glycine receptor, alpha-1, glycine/ivermectin-bound state 3jaf Eukaryo. plasma 5 20 33.4 ± 1.4 0 ± 0 -180.2
1.1.15.01. Glycine receptor, alpha-1, glycine-bound state 3jae Eukaryo. plasma 5 20 31.8 ± 0.4 0 ± 0 -191.1
1.1.15.01. Glycine receptor, alpha-1, strychnine-bound state 3jad Eukaryo. plasma 5 20 30.8 ± 1.0 0 ± 0 -92.4
1.2.32.01. Prostaglandin I2 synthase 3b98 Endoplasm. reticulum 1 0 4.4 ± 1.3 65 ± 6 -4.7
1.2.32.01. Cytochrome P450 17A2 4r21 Endoplasm. reticulum 1 0 1.0 ± 10.0 70 ± 10 -2.4
1.2.32.01. Cytochrome P450 17A1 4r1z Endoplasm. reticulum 1 0 5.0 ± 1.2 83 ± 2 -6.5
1.3.22.01. VDAC-2 channel 4bum Mitochon. outer 1 19 23.4 ± 0.9 4 ± 0 -47.7
2.2.06.02. Cellular retinol-binding protein II 1kqw Eukaryo. plasma 1 0 3.1 ± 1.3 45 ± 13 -4.9
2.2.06.02. Fatty acid binding protein 6, ileal (Gastrotropin) 3elz Eukaryo. plasma 1 0 1.1 ± 0.9 85 ± 6 -2.4