| 1.1.01. |
|
Rhodopsin-like receptors and pumps (4 families) 3.E.1 (TCDB) CL0192 (Pfam) |
| 1.1.02. |
|
Photosynthetic reaction centers and photosystems (3 families) 3.E.2 (TCDB) |
| 1.1.03. |
|
Light-harvesting complexes (2 families) 5.B.4 (TCDB) |
| 1.1.04. |
|
Electron transport chain complex I (NADH dehydrogenase) (1 family) 3.D.1 (TCDB) CL0425 (Pfam) |
| 1.1.05. |
|
Electron transport chain complex II superfamily (6 families) 5.A.3 (TCDB) CL0328 (Pfam) |
| 1.1.06. |
|
Electron transport chain complex III (bc1 and b6f complexes) (1 family) 3.D.3 (TCDB) PF00033 (Pfam) |
| 1.1.07. |
|
Electron transport chain complex IV (cytochrome c oxidase) (1 family) 3.D.4 (TCDB) PF00115 (Pfam) |
| 1.1.08. |
|
Proton or Sodium translocating F-type, V-type and A-type ATPases (1 family) 3.A.2 (TCDB) PF00137 (Pfam) |
| 1.1.09. |
|
P-type ATPase (P-ATPase) (1 family) 3.A.3 (TCDB) PF00122 (Pfam) |
| 1.1.10. |
|
ABC transporters (5 families) 3.A.1 (TCDB) |
| 1.1.11. |
|
General secretory pathway (Sec) (1 family) 3.A.5 (TCDB) PF00344 (Pfam) |
| 1.1.12. |
|
Voltage-gated channel like (3 families) 1.A.1 (TCDB) CL0030 (Pfam) |
| 1.1.13. |
|
ENaC/P2X (2 families) 1.A.6 (TCDB) |
| 1.1.14. |
|
Major Intrinsic Protein (MIP)/FNT superfamily (2 families) 1.A.8 (TCDB) |
| 1.1.15. |
|
Pentameric ligand-gated ion channels (2 families) 1.A.9 (TCDB) PF02932 (Pfam) |
| 1.1.16. |
|
Glutamate-gated Ion Channel (GIC) superfamily (1 family) 1.A.10 (TCDB) PF00060 (Pfam) |
| 1.1.17. |
|
Ammonia and urea transporters (2 families) 1.A.11 (TCDB) |
| 1.1.18. |
|
Large conductance mechanosensitive ion channel (MscL) (1 family) 1.A.22 (TCDB) PF01741 (Pfam) |
| 1.1.19. |
|
Small conductance mechanosensitive ion channel (MscS) (1 family) 1.A.23 (TCDB) PF00924 (Pfam) |
| 1.1.20. |
|
Gap junction-forming connexin (1 family) 1.A.24 (TCDB) PF00029 (Pfam) |
| 1.1.21. |
|
CorA metal ion transporters (MIT) (1 family) 1.A.35 (TCDB) PF01544 (Pfam) |
| 1.1.22. |
|
Pore-forming haemolysin E (1 family) 1.C.10 (TCDB) PF06109 (Pfam) |
| 1.1.25. |
|
Major Facilitator Superfamily (MFS) (7 families) 2.A.1 (TCDB) CL0015 (Pfam) |
| 1.1.26. |
|
APC (Amino acid-Polyamine-organoCation) superfamily (6 families) 2.A.3 (TCDB) CL0062 (Pfam) |
| 1.1.27. |
|
Cation diffusion facilitator (1 family) 2.A.4 (TCDB) CL0184 (Pfam) |
| 1.1.28. |
|
Resistance-nodulation-cell division (3 families) 2.A.6 (TCDB) CL0322 (Pfam) |
| 1.1.29. |
|
Drug/Metabolite Transporter (DMT) (1 family) 2.A.7 (TCDB) CL0184 (Pfam) |
| 1.1.30. |
|
Cytochrome oxidase biogenesis family (1 family) 2.A.9 (TCDB) |
| 1.1.31. |
|
Tellurite-resistance/Dicarboxylate transporter (1 family) 2.A.16 (TCDB) PF03595 (Pfam) |
| 1.1.32. |
|
Dicarboxylate/amino acid:Cation Symporter (DAACS) (1 family) 2.A.23 (TCDB) PF00375 (Pfam) |
| 1.1.33. |
|
Bile acid:Na+ symporter (BASS) family (1 family) 2.A.28 (TCDB) PF01758 (Pfam) |
| 1.1.34. |
|
Mitochondrial Carrier (MC) (1 family) 2.A.29 (TCDB) PF00153 (Pfam) |
| 1.1.35. |
|
Sodium/Proton antiporter (1 family) 2.A.33 (TCDB) PF06965 (Pfam) |
| 1.1.36. |
|
Chloride transporter (ClC) (1 family) 2.A.49 (TCDB) PF00654 (Pfam) |
| 1.1.38. |
|
Multidrug/Oligosaccharidyl-lipid superfamily (1 family) 2.A.66 (TCDB) PF01554 (Pfam) |
| 1.1.39. |
|
Bile/arsenite/riboflavin transporter (BART) (3 families) |
| 1.1.43. |
|
Phosphotransferase system, EIIC superfamily (1 family) 4.A.1 (TCDB) CL0493 (Pfam) |
| 1.1.44. |
|
Disulfide bond oxidoreductase-B (DsbB) (1 family) 5.A.2 (TCDB) PF02600 (Pfam) |
| 1.1.45. |
|
Magnesium ion transporter-E (MgtE) (1 family) 9.A.19 (TCDB) PF03448 (Pfam) |
| 1.1.46. |
|
Mercuric ion uptake (Mer) superfamily (1 family) 1.A.72 (TCDB) PF13493 (Pfam) |
| 1.1.47. |
|
Signal transduction histidine kinase (1 family) 9.B.33 (TCDB) PF13493 (Pfam) |
| 1.1.48. |
|
Putative sulfate transporter (CysZ) (1 family) 9.B.7 (TCDB) |
| 1.1.49. |
|
P-loop containing nucleoside triphosphate hydrolase, transmembrane (1 family) CL0023 (Pfam) |
| 1.1.50. |
|
Methane monooxygenase (1 family) PF02461 (Pfam) |
| 1.1.51. |
|
Vitamin K epoxide reductase (1 family) PF07884 (Pfam) |
| 1.1.52. |
|
Glycosyl transferase GT-C superfamily (1 family) CL0111 (Pfam) |
| 1.1.53. |
|
Steroid oxidoreductase (1 family) CL0115 (Pfam) |
| 1.1.54. |
|
Prokaryotic diacylglycerol kinase (1 family) PF01219 (Pfam) |
| 1.1.55. |
|
LPS O-antigen chain length determinant protein (1 family) PF02706 (Pfam) |
| 1.1.56. |
|
Sulfatase (1 family) PF00884 (Pfam) |
| 1.1.57. |
|
Peptidase AD (2 families) 1.A.54 (TCDB) CL0130 (Pfam) |
| 1.1.58. |
|
Peptidase family M50 (1 family) PF02163 (Pfam) |
| 1.1.59. |
|
ClpP/Crotonase, transmembrane (1 family) CL0127 (Pfam) |
| 1.1.60. |
|
Rhomboid protease (1 family) 9.B.104 (TCDB) CL0207 (Pfam) |
| 1.1.61. |
|
MAPEG (Eicosanoid and Glutathione metabolism proteins) (1 family) PF01124 (Pfam) |
| 1.1.62. |
|
Transmembrane protein containing HAMP domain (1 family) PF00672 (Pfam) |
| 1.1.63. |
|
Peptidase SF (1 family) CL0299 (Pfam) |
| 1.1.64. |
|
Sodium/calcium exchanger (1 family) 2.A.19 (TCDB) PF01699 (Pfam) |
| 1.1.65. |
|
Concentrative nucleoside transporter (1 family) 2.A.41 (TCDB) PF07662 (Pfam) |
| 1.1.66. |
|
Proton-translocating pyrophosphatase (1 family) 3.A.10 (TCDB) PF03030 (Pfam) |
| 1.1.67. |
|
Transmembrane proteins 14 (1 family) PF03647 (Pfam) |
| 1.1.68. |
|
Transmembrane protein 141 (1 family) |
| 1.1.69. |
|
Hypoxia induced protein (1 family) PF04588 (Pfam) |
| 1.1.70. |
|
Peptidase family M48 (1 family) PF01435 (Pfam) |
| 1.1.71. |
|
Bacterial phosphoinositide phosphatase (1 family) |
| 1.1.72. |
|
Ion transporter superfamily (1 family) CL0182 (Pfam) |
| 1.1.73. |
|
Type IV (VirB) secretory system (1 family) 3.A.7 (TCDB) PF03743 (Pfam) |
| 1.1.74. |
|
Calcium release-activated calcium (CRAC) channel (1 family) 1.A.52 (TCDB) PF07856 (Pfam) |
| 1.1.75. |
|
Twin arginine targeting (Tat) family (2 families) 2.A.64 (TCDB) |
| 1.1.76. |
|
Urea/amide channel (1 family) 1.A.29 (TCDB) PF02293 (Pfam) |
| 1.1.77. |
|
Cellulose-conducting channel (1 family) |
| 1.1.78. |
|
Nogo receptors (1 family) PF02453 (Pfam) |
| 1.2.01. |
|
Receptor-type kinases (1 family) PF07714 (Pfam) |
| 1.2.02. |
|
T-cell surface glycoprotein CD3 zeta chain (1 family) PF11628 (Pfam) |
| 1.2.03. |
|
Immunoglobulin superfamily (8 families) CL0011 (Pfam) |
| 1.2.04. |
|
Integrin (1 family) |
| 1.2.05. |
|
Leucine rich repeat-containing transmembrane proteins (1 family) CL0022 (Pfam) |
| 1.2.06. |
|
C1q and TNF superfamily (1 family) CL0100 (Pfam) |
| 1.2.07. |
|
Protein jagged (1 family) CL0001 (Pfam) |
| 1.2.08. |
|
TYROBP (1 family) |
| 1.2.09. |
|
Stannin (1 family) PF09049 (Pfam) |
| 1.2.10. |
|
Glycophorin (1 family) PF01102 (Pfam) |
| 1.2.11. |
|
Inovirus (filamentous phage) major coat protein (2 families) CL0371 (Pfam) |
| 1.2.12. |
|
Pilin (1 family) PF00114 (Pfam) |
| 1.2.13. |
|
PufX (1 family) PF11511 (Pfam) |
| 1.2.14. |
|
Zona pellucida-like domain containing proteins (1 family) PF00100 (Pfam) |
| 1.2.15. |
|
SNARE-like superfamily (1 family) CL0212 (Pfam) |
| 1.2.16. |
|
Pulmonary surfactant-associated protein (1 family) PF08999 (Pfam) |
| 1.2.17. |
|
SNARE complex (3 families) 1.F.1 (TCDB) CL0455 (Pfam) |
| 1.2.18. |
|
Sortase (1 family) PF04203 (Pfam) |
| 1.2.19. |
|
Mitochondrial protein translocase (1 family) 3.A.8 (TCDB) PF02064 (Pfam) |
| 1.2.20. |
|
Mycobacterial protein Rv1761c (1 family) |
| 1.2.21. |
|
BNip3 protein family (1 family) 1.A.20 (TCDB) PF06553 (Pfam) |
| 1.2.22. |
|
Bcl-2 inhibitors of programmed cell death (1 family) 1.A.21 (TCDB) PF00452 (Pfam) |
| 1.2.23. |
|
Viral channel proteins (1 family) 1.A.19 (TCDB) PF00599 (Pfam) |
| 1.2.24. |
|
Vpu protein (1 family) 1.A.40 (TCDB) PF00558 (Pfam) |
| 1.2.25. |
|
Single-helix ATPase regulators (2 families) |
| 1.2.26. |
|
Outer membrane auxiliary proteins (1 family) 1.B.18 (TCDB) PF02563 (Pfam) |
| 1.2.27. |
|
Fst toxin (1 family) 1.C.64 (TCDB) PF13955 (Pfam) |
| 1.2.30. |
|
Voltage-gated K+ channel accessory protein (MinK) (1 family) 8.A.10 (TCDB) PF02060 (Pfam) |
| 1.2.31. |
|
Multi-heme cytochromes (1 family) CL0317 (Pfam) |
| 1.2.32. |
|
Cytochrome P450 (1 family) PF00067 (Pfam) |
| 1.2.33. |
|
Transmembrane proteins with NAD(P)-binding Rossmann-fold domains (2 families) CL0063 (Pfam) |
| 1.2.34. |
|
Oligosaccaryltransferase (1 family) PF10215 (Pfam) |
| 1.2.35. |
|
Amidase signature (AS) enzymes (1 family) PF01425 (Pfam) |
| 1.2.36. |
|
Sialidase superfamily (1 family) CL0434 (Pfam) |
| 1.2.37. |
|
N-(deoxy)ribosyltransferase-like superfamily (1 family) CL0498 (Pfam) |
| 1.2.38. |
|
Lysozyme-like (3 families) CL0037 (Pfam) |
| 1.2.39. |
|
Peptidase MA (3 families) CL0126 (Pfam) |
| 1.2.40. |
|
Mitochondrial fission 1 protein family (1 family) |
| 1.2.41. |
|
Acyl CoA binding protein (1 family) PF00887 (Pfam) |
| 1.2.42. |
|
Calcineurin-like phosphoesterase (1 family) CL0163 (Pfam) |
| 1.2.43. |
|
Viral glycoprotein (6 families) 1.G (TCDB) |
| 1.2.44. |
|
Amyloid beta A4 protein (1 family) 1.C.50 (TCDB) PF03494 (Pfam) |
| 1.3.01. |
|
OmpA-OmpF porin family (n=8,S=10) (2 families) 1.B.6 (TCDB) |
| 1.3.02. |
|
Opacity porins (n=8,S=10) (1 family) PF02462 (Pfam) |
| 1.3.03. |
|
Outer membrane protein W (OmpW) family (n=8,S=10) (1 family) 1.B.39 (TCDB) PF03922 (Pfam) |
| 1.3.04. |
|
Lipid A acylation (n=8,S=10) (1 family) PF07017 (Pfam) |
| 1.3.05. |
|
Lipid A 3-O-deacylase (PagL) (n=8,S=10) (1 family) PF09411 (Pfam) |
| 1.3.06. |
|
Major OMP (n=8,S=10) (1 family) |
| 1.3.07. |
|
Omptin (n=10,S=12) (1 family) 1.B.1 (TCDB) PF01278 (Pfam) |
| 1.3.08. |
|
OM adhesion protein (n=10,S=12) (1 family) PF07239 (Pfam) |
| 1.3.09. |
|
Lipid A deacylase (n=12, S=14) (1 family) PF09982 (Pfam) |
| 1.3.10. |
|
Oligogalactoronate-specific porin (KdgM) (n=12,S=14) (1 family) 1.B.35 (TCDB) PF06178 (Pfam) |
| 1.3.11. |
|
Autotransporter (AT) (n=12,S=14) (2 families) |
| 1.3.12. |
|
OM phospholipase (n=12,S=16) (1 family) PF02253 (Pfam) |
| 1.3.13. |
|
Nucleoside-specific channel-forming membrane porin (Tsx) (n=12,S=16) (1 family) 1.B.10 (TCDB) PF03502 (Pfam) |
| 1.3.14. |
|
FadL outer membrane protein (FadL) (n=14,S=14) (1 family) 1.B.9 (TCDB) PF03349 (Pfam) |
| 1.3.15. |
|
OmpG porin (n=14,S=16) (1 family) 1.B.21 (TCDB) PF09381 (Pfam) |
| 1.3.16. |
|
Trimeric porins (n=16,S=20) (4 families) |
| 1.3.17. |
|
Omp85-TpsB transporters (n=16,S=20) (1 family) 1.B.20 (TCDB) PF03865 (Pfam) |
| 1.3.18. |
|
Sugar porins (n=18,S=22) (1 family) 1.B.3 (TCDB) PF02264 (Pfam) |
| 1.3.19. |
|
OprD/AlgE superfamily (n=18,S=22) (2 families) |
| 1.3.20. |
|
Ligand-gated protein channels (n=22,S=24) (1 family) 1.B.14 (TCDB) PF00593 (Pfam) |
| 1.3.21. |
|
Fimbrial usher porin (n=24,S=26) (1 family) 1.B.11 (TCDB) PF00577 (Pfam) |
| 1.3.22. |
|
Mitochondrial and plastid porins (n=19,S=20) (1 family) 1.B.8 (TCDB) PF01459 (Pfam) |
| 1.3.23. |
|
Trimeric autotransporter (n=12,S=12) (1 family) 1.B.40 (TCDB) CL0327 (Pfam) |
| 1.3.24. |
|
Outer Membrane Factor (OMF) (n=12,S=18) trimeric (1 family) 1.B.17 (TCDB) PF02321 (Pfam) |
| 1.3.25. |
|
Aerolysin (2 families) |
| 1.3.26. |
|
Mycobacterial Porin (MBP) (n=16,S=16) (1 family) 1.B.24 (TCDB) PF09203 (Pfam) |
| 2.1.01. |
|
Secretory phospholipase A2 (4 families) |
| 2.1.02. |
|
Lipoxygenase (1 family) PF00305 (Pfam) |
| 2.1.03. |
|
Phospholipase C/P1 nuclease (1 family) CL0368 (Pfam) |
| 2.1.04. |
|
Heme-dependent peroxidases (1 family) PF03098 (Pfam) |
| 2.1.05. |
|
Six-hairpin glycosidase superfamily (2 families) CL0059 (Pfam) |
| 2.1.06. |
|
Signal peptide binding domain (1 family) PF02978 (Pfam) |
| 2.1.07. |
|
Multiheme cytochrome (1 family) CL0317 (Pfam) |
| 2.1.08. |
|
Cytochrome c (2 families) CL0318 (Pfam) |
| 2.1.09. |
|
Uteroglobin-like (1 family) CL0370 (Pfam) |
| 2.1.10. |
|
Glycolipid transfer protein (1 family) PF08718 (Pfam) |
| 2.1.11. |
|
Spectrin repeat (1 family) PF00435 (Pfam) |
| 2.1.12. |
|
Outer surface protein C (1 family) PF01441 (Pfam) |
| 2.1.13. |
|
Crustacean CHH/MIH/GIH neurohormone (1 family) PF01147 (Pfam) |
| 2.1.14. |
|
Tetratrico peptide repeat superfamily (3 families) CL0020 (Pfam) |
| 2.1.15. |
|
ENTH/VHS domain (3 families) CL0009 (Pfam) |
| 2.1.16. |
|
Myelin basic protein (1 family) PF01669 (Pfam) |
| 2.1.17. |
|
SHERP (1 family) |
| 2.1.18. |
|
Annexins (1 family) 1.A.31 (TCDB) PF00191 (Pfam) |
| 2.1.19. |
|
BamCD complex (1 family) PF06804 (Pfam) |
| 2.1.20. |
|
GLA-domain (1 family) PF00594 (Pfam) |
| 2.1.21. |
|
Retroviral matrix protein (5 families) PF00598 (Pfam) |
| 2.1.22. |
|
Alternative oxidase (1 family) PF01786 (Pfam) |
| 2.1.23. |
|
Ectatomin (1 family) PF06457 (Pfam) |
| 2.1.24. |
|
Saposin (1 family) 1.C.35 (TCDB) PF03489 (Pfam) |
| 2.1.25. |
|
Cyclic bacteriocin (class IIc) (2 families) |
| 2.1.26. |
|
Colicin pore forming domain (1 family) 1.C.1 (TCDB) PF01024 (Pfam) |
| 2.1.27. |
|
delta-Endotoxin (1 family) 1.C.2 (TCDB) PF03945 (Pfam) |
| 2.1.28. |
|
Heat-stable enterotoxin B (1 family) PF09075 (Pfam) |
| 2.1.29. |
|
Alpha-helical (HDL) apolipoproteins (6 families) |
| 2.1.30. |
|
Mistic (1 family) 9.B.23 (TCDB) PF11458 (Pfam) |
| 2.1.31. |
|
Colicin M (1 family) |
| 2.1.32. |
|
Synuclein (1 family) 1.C.77 (TCDB) PF01387 (Pfam) |
| 2.1.33. |
|
DrrA protein (1 family) |
| 2.1.34. |
|
DivIVA protein (1 family) PF05103 (Pfam) |
| 2.1.35. |
|
PASCIN (protein kinase C and casein kinase substrate) (1 family) PF00611 (Pfam) |
| 2.1.36. |
|
Endoplasmic reticulum oxidoreductin (1 family) PF04137 (Pfam) |
| 2.1.37. |
|
DBL (Duffy-binding like) (1 family) CL0195 (Pfam) |
| 2.1.38. |
|
Corynebacterial porin B (1 family) 1.B.41 (TCDB) PF11565 (Pfam) |
| 2.1.39. |
|
Viral protein R (VPR) family (1 family) 1.A.42 (TCDB) PF00522 (Pfam) |
| 2.1.40. |
|
Munc13 (mammalian) homology domain (MHD) (1 family) PF10540 (Pfam) |
| 2.1.41. |
|
Phosphatidylinositol 3- and 4-kinase (1 family) PF00454 (Pfam) |
| 2.1.42. |
|
Enterocin A immunity protein (1 family) PF08951 (Pfam) |
| 2.1.43. |
|
Acanthaporin (1 family) |
| 2.1.44. |
|
Bacteriocin, class IV (1 family) |
| 2.1.45. |
|
Plant antimicrobial alpha-hairpin (1 family) |
| 2.1.46. |
|
Ferritin-like superfamily (1 family) CL0044 (Pfam) |
| 2.1.47. |
|
Globin-like (1 family) CL0090 (Pfam) |
| 2.1.48. |
|
Dehydroquinate synthase-like superfamily (1 family) CL0224 (Pfam) |
| 2.1.49. |
|
HD/PDEase superfamily (1 family) CL0237 (Pfam) |
| 2.1.50. |
|
PhoU-like superfamily (1 family) CL0297 (Pfam) |
| 2.1.51. |
|
Protein prenyltransferase (1 family) PF01239 (Pfam) |
| 2.1.52. |
|
Insect pheromone/odorant binding proteins (1 family) PF03392 (Pfam) |
| 2.1.53. |
|
Pex19 protein family (1 family) PF04614 (Pfam) |
| 2.1.54. |
|
Programmed cell death protein 10 family (1 family) PF06840 (Pfam) |
| 2.1.55. |
|
Pas factor (1 family) PF09016 (Pfam) |
| 2.1.56. |
|
L27 domain (1 family) PF09045 (Pfam) |
| 2.1.57. |
|
Adhesion protein FadA (1 family) PF09403 (Pfam) |
| 2.1.58. |
|
Death Domain superfamily (1 family) CL0041 (Pfam) |
| 2.1.59. |
|
Squalene/phytoene synthase (1 family) PF00494 (Pfam) |
| 2.1.60. |
|
Sea anemone peptide toxin, class 1 (1 family) 8.B.14 (TCDB) PF01549 (Pfam) |
| 2.2.01. |
|
Bacterial adhesins (1 family) |
| 2.2.02. |
|
Peptidase clan PA (3 families) CL0124 (Pfam) |
| 2.2.03. |
|
Peptidase clan AA (2 families) CL0129 (Pfam) |
| 2.2.04. |
|
Retinal pigment epithelial membrane protein (1 family) PF03055 (Pfam) |
| 2.2.05. |
|
Multicopper oxidase (2 families) CL0026 (Pfam) |
| 2.2.06. |
|
Lipocalins (2 families) 8.A.33 (TCDB) CL0116 (Pfam) |
| 2.2.07. |
|
Streptavidin-like (3 families) |
| 2.2.08. |
|
Thaumatin (1 family) PF00314 (Pfam) |
| 2.2.09. |
|
Beta propellers (4 families) CL0186 (Pfam) |
| 2.2.10. |
|
High potential iron protein (1 family) PF01355 (Pfam) |
| 2.2.11. |
|
C2 domain (1 family) CL0154 (Pfam) |
| 2.2.12. |
|
Immunoglobulin-like superfamily (E set) (6 families) CL0159 (Pfam) |
| 2.2.13. |
|
Carbohydrate binding domain superfamily (1 family) CL0203 (Pfam) |
| 2.2.14. |
|
Galactose-binding domain-like (2 families) CL0202 (Pfam) |
| 2.2.15. |
|
Gamma-Crystallin-like superfamily (1 family) CL0333 (Pfam) |
| 2.2.16. |
|
Lipoprotein localization factors (1 family) PF07161 (Pfam) |
| 2.2.17. |
|
Cystine-knot cytokines (1 family) CL0079 (Pfam) |
| 2.2.18. |
|
Adaptin (1 family) CL0448 (Pfam) |
| 2.2.19. |
|
Adsorption protein p2 (1 family) PF09214 (Pfam) |
| 2.2.20. |
|
PH domain-like (3 families) CL0266 (Pfam) |
| 2.2.21. |
|
Beta-trefoil superfamily (5 families) CL0066 (Pfam) |
| 2.2.22. |
|
Hydrophobin (1 family) PF06766 (Pfam) |
| 2.2.23. |
|
BamB lipoprotein (1 family) PF01011 (Pfam) |
| 2.2.24. |
|
Vitelline membrane outer protein-I (1 family) PF03762 (Pfam) |
| 2.2.25. |
|
Superoxide dismutase (1 family) PF00080 (Pfam) |
| 2.2.26. |
|
FYVE/PHD zinc finger (1 family) CL0390 (Pfam) |
| 2.2.27. |
|
C1 domain (1 family) CL0006 (Pfam) |
| 2.2.28. |
|
Invertebrate chitin-binding proteins (2 families) CL0155 (Pfam) |
| 2.2.29. |
|
MAC/Perforin (MABP) domain (1 family) 1.C.39 (TCDB) PF10240 (Pfam) |
| 2.2.30. |
|
Elafin-like (1 family) PF10511 (Pfam) |
| 2.2.31. |
|
Kringle-like (1 family) |
| 2.2.32. |
|
Anemone pore-forming cytolysin (1 family) 1.C.38 (TCDB) PF06369 (Pfam) |
| 2.2.33. |
|
Plant lectins/antimicrobial peptides (1 family) PF00187 (Pfam) |
| 2.2.34. |
|
Omega conotoxin-like knottin (10 families) CL0083 (Pfam) |
| 2.2.35. |
|
Cholesterol-dependent cytolysin (1 family) CL0293 (Pfam) |
| 2.2.36. |
|
Cyclotides (1 family) PF03784 (Pfam) |
| 2.2.37. |
|
Copper amine oxidase (1 family) PF01179 (Pfam) |
| 2.2.38. |
|
Cloacin translocation domain (1 family) PF03515 (Pfam) |
| 2.2.39. |
|
Snake toxin-like (2 families) 1.C.74 (TCDB) CL0117 (Pfam) |
| 2.2.40. |
|
Neurotoxin III (1 family) PF08098 (Pfam) |
| 2.2.41. |
|
Defensin-like (5 families) CL0075 (Pfam) |
| 2.2.42. |
|
Pneumovirus matrix protein (1 family) PF03393 (Pfam) |
| 2.2.43. |
|
TRAP-like (1 family) PF01987 (Pfam) |
| 2.2.44. |
|
PLAT domain (1 family) CL0321 (Pfam) |
| 2.2.45. |
|
Pectate lyase-like (2 families) CL0268 (Pfam) |
| 2.2.47. |
|
Galactose-binding domain (1 family) PF02927 (Pfam) |
| 2.2.48. |
|
Molybdenum cofactor biosynthesis protein MoeA (1 family) PF03453 (Pfam) |
| 2.2.49. |
|
Insect antifreeze protein (1 family) PF05264 (Pfam) |
| 2.2.50. |
|
Treponema lipoprotein (1 family) 1.B.45 (TCDB) |
| 2.2.51. |
|
Necrosis inducing protein (1 family) PF05630 (Pfam) |
| 2.2.52. |
|
Allene oxide cyclase (1 family) PF06351 (Pfam) |
| 2.2.53. |
|
Fas apoptotic inhibitory molecule (1 family) PF06905 (Pfam) |
| 2.2.54. |
|
Hepatitis C virus non-structural 5a domain (1 family) PF08300 (Pfam) |
| 2.2.55. |
|
Aspartic peptidase of Shewanella (1 family) PF08985 (Pfam) |
| 2.2.56. |
|
Beta-2-glycoprotein-1 fifth domain (1 family) PF09014 (Pfam) |
| 2.2.57. |
|
Beta fructosidase superfamily (1 family) CL0143 (Pfam) |
| 2.2.58. |
|
Arrestin-like (1 family) CL0135 (Pfam) |
| 2.3.01. |
|
Transglycosidases (10 families) CL0058 (Pfam) |
| 2.3.02. |
|
PLC-like phosphodiesterases (2 families) CL0384 (Pfam) |
| 2.3.03. |
|
FMN-linked oxidoreductases (1 family) PF01180 (Pfam) |
| 2.3.04. |
|
Amidohydrolase superfamily (1 family) CL0034 (Pfam) |
| 2.3.05. |
|
FAD/NAD(P)-binding domain (6 families) CL0063 (Pfam) |
| 2.3.06. |
|
Alpha/beta-hydrolases (15 families) CL0028 (Pfam) |
| 2.3.07. |
|
Peptidase clan MH/MC/MF (1 family) CL0035 (Pfam) |
| 2.3.08. |
|
FabD/lysophospholipase-like (1 family) CL0323 (Pfam) |
| 2.3.09. |
|
Flavokinase-like nucleotidyl transferase (1 family) CL0119 (Pfam) |
| 2.3.10. |
|
UDP-Glycosyltransferase/glycogen phosphorylase (5 families) CL0113 (Pfam) |
| 2.3.11. |
|
Chelatase (1 family) CL0043 (Pfam) |
| 2.3.12. |
|
Phosphotyrosine protein phosphatases II (1 family) |
| 2.3.13. |
|
Thioredoxin-like (7 families) CL0172 (Pfam) |
| 2.3.14. |
|
CRAL/TRIO domain (2 families) PF00650 (Pfam) |
| 2.3.15. |
|
HIGH-signature proteins, UspA, and PP-ATPase (2 families) CL0039 (Pfam) |
| 2.3.16. |
|
P-loop containing nucleoside triphosphate hydrolases (10 families) CL0023 (Pfam) |
| 2.3.17. |
|
Common phosphate binding-site TIM barrel superfamily (2 families) CL0036 (Pfam) |
| 2.3.18. |
|
CoA-dependent acyltransferases (2 families) CL0149 (Pfam) |
| 2.3.19. |
|
Nucleotide-diphospho-sugar transferases (3 families) CL0110 (Pfam) |
| 2.3.20. |
|
CheY-like (1 family) PF01058 (Pfam) |
| 2.3.21. |
|
Phosphatase (1 family) CL0031 (Pfam) |
| 2.3.22. |
|
Flavoprotein (2 families) CL0042 (Pfam) |
| 2.3.23. |
|
Thiolase-like superfamily (1 family) CL0046 (Pfam) |
| 2.3.24. |
|
Haloacid dehalogenase-like hydrolase superfamily (2 families) CL0137 (Pfam) |
| 2.3.25. |
|
SGNH hydrolase superfamily (1 family) CL0264 (Pfam) |
| 2.3.26. |
|
Isocitrate/Isopropylmalate dehydrogenase-like superfamily (1 family) CL0270 (Pfam) |
| 2.3.27. |
|
Dihydrofolate reductase-like (1 family) CL0387 (Pfam) |
| 2.3.28. |
|
NAD(P)-linked oxidoreductase (1 family) |
| 2.3.29. |
|
Putative undecaprenyl diphosphate synthase (1 family) PF01255 (Pfam) |
| 2.3.30. |
|
Low molecular weight phosphotyrosine protein phosphatase (1 family) PF01451 (Pfam) |
| 2.3.31. |
|
PTS system sorbose subfamily IIB component (1 family) PF03830 (Pfam) |
| 2.3.32. |
|
MurD-like peptide ligases (1 family) PF08245 (Pfam) |
| 2.3.33. |
|
Glycosyl hydrolase family 85 (1 family) PF03644 (Pfam) |
| 2.4.01. |
|
FAD-linked reductases (1 family) |
| 2.4.02. |
|
NTF2-like (2 families) CL0051 (Pfam) |
| 2.4.03. |
|
Transcriptional factor tubby (1 family) PF01167 (Pfam) |
| 2.4.04. |
|
DNase I-like (2 families) |
| 2.4.05. |
|
Sterol carrier protein (2 families) CL0311 (Pfam) |
| 2.4.06. |
|
Bet v1-like (4 families) CL0209 (Pfam) |
| 2.4.07. |
|
PX domain (1 family) PF00787 (Pfam) |
| 2.4.08. |
|
Ribonuclease-like (1 family) |
| 2.4.09. |
|
Protein kinase superfamily (1 family) CL0016 (Pfam) |
| 2.4.10. |
|
PreATP-grasp domain (1 family) |
| 2.4.11. |
|
Plant thionin (1 family) 1.C.44 (TCDB) PF00321 (Pfam) |
| 2.4.12. |
|
Liver-expressed antimicrobial peptide (1 family) PF07359 (Pfam) |
| 2.4.13. |
|
OSBP-related proteins (1 family) PF01237 (Pfam) |
| 2.4.15. |
|
Negative factor (Nef) protein (1 family) PF00469 (Pfam) |
| 2.4.16. |
|
Scorpion toxin-like knottin (11 families) CL0054 (Pfam) |
| 2.4.17. |
|
Apolipoprotein of LDL particles (1 family) PF01347 (Pfam) |
| 2.4.18. |
|
NTN hydrolase superfamily (1 family) CL0052 (Pfam) |
| 2.4.19. |
|
GlnB-like superfamily (1 family) CL0089 (Pfam) |
| 2.4.20. |
|
Peptidase clan CA (4 families) CL0125 (Pfam) |
| 2.4.21. |
|
Peptidase MD (2 families) CL0170 (Pfam) |
| 2.4.23. |
|
Heme NO and oxygen binding like (1 family) CL0210 (Pfam) |
| 2.4.24. |
|
Enolase like TIM barrel (1 family) CL0256 (Pfam) |
| 2.4.25. |
|
N-acetyltransferase like (1 family) CL0257 (Pfam) |
| 2.4.26. |
|
HIT superfamily (1 family) CL0265 (Pfam) |
| 2.4.27. |
|
AIG2/ChaC-like superfamily (1 family) CL0278 (Pfam) |
| 2.4.28. |
|
DAP epimerase superfamily (1 family) CL0288 (Pfam) |
| 2.4.29. |
|
Superantigen toxins (1 family) CL0386 (Pfam) |
| 2.4.30. |
|
TRAF domain-like superfamily (1 family) CL0389 (Pfam) |
| 2.4.31. |
|
Fibrinogen (1 family) CL0422 (Pfam) |
| 2.4.32. |
|
Acid phosphatase/Vanadium-dependent haloperoxidase (1 family) CL0525 (Pfam) |
| 2.4.33. |
|
PGBD superfamily (2 families) CL0244 (Pfam) |
| 2.4.34. |
|
Cysteine-rich secretory protein (CRISP) family (1 family) PF00188 (Pfam) |
| 2.4.35. |
|
Catalase (1 family) PF00199 (Pfam) |
| 2.4.36. |
|
Transforming growth factor (TGF)-beta (1 family) PF00688 (Pfam) |
| 2.4.37. |
|
Acylphosphatase (1 family) PF00708 (Pfam) |
| 2.4.38. |
|
N-acetylmuramoyl-L-alanine amidase (1 family) PF01510 (Pfam) |
| 2.4.39. |
|
Antirestriction protein (1 family) PF03230 (Pfam) |
| 2.4.40. |
|
IpaB/EvcA family (1 family) PF03278 (Pfam) |
| 2.4.41. |
|
Hepatitis C virus non-structural protein NS2 (1 family) PF01538 (Pfam) |
| 2.4.42. |
|
Bactericidal permeability increasing protein family (1 family) 1.C.40 (TCDB) PF01273 (Pfam) |
| 2.4.45. |
|
Formylglycine-generating sulfatase enzyme (1 family) PF03781 (Pfam) |
| 2.4.46. |
|
Cell envelope-related transcriptional attenuator domain (1 family) PF03816 (Pfam) |
| 2.4.47. |
|
Neutral/alkaline non-lysosomal ceramidase (1 family) PF04734 (Pfam) |
| 2.4.48. |
|
PPPDE putative peptidase domain (1 family) PF05903 (Pfam) |
| 2.4.49. |
|
Inositol-pentakisphosphate 2-kinase (1 family) PF06090 (Pfam) |
| 2.4.50. |
|
Vesiculovirus matrix protein (1 family) PF06326 (Pfam) |
| 2.4.51. |
|
Heme-binding protein A (1 family) PF06438 (Pfam) |
| 2.4.52. |
|
Spondin (1 family) PF06468 (Pfam) |
| 2.4.53. |
|
Resistin (1 family) PF06954 (Pfam) |
| 2.4.54. |
|
PilZ domain (1 family) PF07238 (Pfam) |
| 3.1.01. |
|
Topogenic peptides (6 families) |
| 3.1.02. |
|
Peptide fragments of transmembrane proteins (12 families) |
| 3.1.03. |
|
Membrane anchor helices of peripheral proteins (5 families) |
| 3.1.04. |
|
Peptide fragments of water-soluble proteins (4 families) |
| 3.1.05. |
|
Designed alpha-helical peptides (10 families) |
| 3.1.06. |
|
Apolipoprotein peptides (2 families) |
| 3.1.07. |
|
Viral fusion and anchor peptides (8 families) |
| 3.1.08. |
|
Antifreeze protein, type I (1 family) |
| 3.1.09. |
|
Herpesvirus US12 family (1 family) PF05363 (Pfam) |
| 3.1.10. |
|
Alpha-helical bacterial pheromones (1 family) |
| 3.1.11. |
|
Peptide hormones (4 families) |
| 3.1.12. |
|
Endothelin-like peptides (1 family) PF00322 (Pfam) |
| 3.1.13. |
|
Calcitonin (1 family) 1.C.49 (TCDB) PF00214 (Pfam) |
| 3.1.14. |
|
Tachykinin family (1 family) PF02202 (Pfam) |
| 3.1.15. |
|
Bacteriocin, class IIa (4 families) PF01721 (Pfam) |
| 3.1.16. |
|
Bacteriocin, class IIb (1 family) |
| 3.1.17. |
|
Antimicrobial peptide HP (2-20) (1 family) |
| 3.1.18. |
|
Delta lysin (1 family) PF05372 (Pfam) |
| 3.1.19. |
|
Peptaibol (1 family) 1.D.5 (TCDB) |
| 3.1.20. |
|
Alpha-conotoxins (1 family) |
| 3.1.21. |
|
Insect antimicrobial peptides (7 families) |
| 3.1.22. |
|
Scorpion NDBP 5 family (1 family) |
| 3.1.23. |
|
Meucin (1 family) |
| 3.1.24. |
|
Penaeidin (1 family) PF05927 (Pfam) |
| 3.1.25. |
|
Latarcin (1 family) PF10279 (Pfam) |
| 3.1.26. |
|
Pleurocidin (1 family) 1.C.62 (TCDB) PF08107 (Pfam) |
| 3.1.27. |
|
Pardaxin (1 family) PF07425 (Pfam) |
| 3.1.28. |
|
Amphibian antimicrobial peptides (6 families) |
| 3.1.29. |
|
Cathelicidin (3 families) 1.C.33 (TCDB) PF00666 (Pfam) |
| 3.1.30. |
|
Lactotransferrin peptides (1 family) |
| 3.1.31. |
|
Dermcidin (1 family) |
| 3.1.32. |
|
Toxin-antitoxin module (1 family) 1.C.103 (TCDB) |
| 3.2.01. |
|
Antimicrobial beta-hairpin (8 families) |
| 3.2.02. |
|
Ksi and T conotoxins (2 families) 8.B.4 (TCDB) |
| 3.2.03. |
|
Hepcidin (1 family) PF06446 (Pfam) |
| 3.2.04. |
|
Cyclic trypsin inhibitor (1 family) |
| 3.2.05. |
|
Macrocyclic bacteriocins (2 families) |
| 3.2.06. |
|
Paralytic peptide (1 family) PF02425 (Pfam) |
| 3.2.07. |
|
Tricyclic peptide RP71935 (1 family) |
| 3.2.08. |
|
Amyloid beta-sheet peptides (2 families) |
| 3.2.09. |
|
Octreotide (1 family) |
| 3.3.01. |
|
Gramicidin A channel (1 family) 1.D.1 (TCDB) |
| 3.3.02. |
|
Poly-proline helix (1 family) |
| 3.4.01. |
|
Gramicidin S (1 family) |
| 3.4.02. |
|
Lantibiotic peptides (class I bacteriocins) (6 families) 1.C.20 (TCDB) |
| 3.4.03. |
|
Heat-stable enterotoxin (1 family) |
| 3.4.04. |
|
Cyclic lipopeptide antibiotics (2 families) |
| 3.4.05. |
|
Cyclosporin (1 family) |
| 3.4.06. |
|
Conomarphin (1 family) |
| 3.4.07. |
|
Designed nonregular peptides (2 families) |
| 3.4.08. |
|
Neurotensin/neuromedin N (1 family) PF07421 (Pfam) |
| 3.4.09. |
|
Catestatin (1 family) PF01271 (Pfam) |
