PDB ID or protein name

Alpha-helical polytopic superfamilies

1.1.01. Rhodopsin-like receptors and pumps (4 families) 3.E.1 (TCDB) CL0192 (Pfam)
1.1.02. Photosynthetic reaction centers and photosystems (3 families) 3.E.2 (TCDB)
1.1.03. Light-harvesting complexes (2 families) 5.B.4 (TCDB)
1.1.04. Electron transport chain complex I (NADH dehydrogenase) (1 family) 3.D.1 (TCDB) CL0425 (Pfam)
1.1.05. Electron transport chain complex II superfamily (6 families) 5.A.3 (TCDB) CL0328 (Pfam)
1.1.06. Electron transport chain complex III (bc1 and b6f complexes) (1 family) 3.D.3 (TCDB) PF00033 (Pfam)
1.1.07. Electron transport chain complex IV (cytochrome c oxidase) (1 family) 3.D.4 (TCDB) PF00115 (Pfam)
1.1.08. Proton or Sodium translocating F-type, V-type and A-type ATPases (1 family) 3.A.2 (TCDB) PF00137 (Pfam)
1.1.09. P-type ATPase (P-ATPase) (1 family) 3.A.3 (TCDB) PF00122 (Pfam)
1.1.10. ABC transporters (5 families) 3.A.1 (TCDB)
1.1.11. General secretory pathway (Sec) (1 family) 3.A.5 (TCDB) PF00344 (Pfam)
1.1.12. Voltage-gated channel like (3 families) 1.A.1 (TCDB) CL0030 (Pfam)
1.1.13. ENaC/P2X (2 families) 1.A.6 (TCDB)
1.1.14. Major Intrinsic Protein (MIP)/FNT superfamily (2 families) 1.A.8 (TCDB)
1.1.15. Pentameric ligand-gated ion channels (2 families) 1.A.9 (TCDB) PF02932 (Pfam)
1.1.16. Glutamate-gated Ion Channel (GIC) superfamily (1 family) 1.A.10 (TCDB) PF00060 (Pfam)
1.1.17. Ammonia and urea transporters (2 families) 1.A.11 (TCDB)
1.1.18. Large conductance mechanosensitive ion channel (MscL) (1 family) 1.A.22 (TCDB) PF01741 (Pfam)
1.1.19. Small conductance mechanosensitive ion channel (MscS) (1 family) 1.A.23 (TCDB) PF00924 (Pfam)
1.1.20. Gap junction-forming connexin (1 family) 1.A.24 (TCDB) PF00029 (Pfam)
1.1.21. CorA metal ion transporters (MIT) (1 family) 1.A.35 (TCDB) PF01544 (Pfam)
1.1.22. Pore-forming haemolysin E (1 family) 1.C.10 (TCDB) PF06109 (Pfam)
1.1.25. Major Facilitator Superfamily (MFS) (7 families) 2.A.1 (TCDB) CL0015 (Pfam)
1.1.26. APC (Amino acid-Polyamine-organoCation) superfamily (6 families) 2.A.3 (TCDB) CL0062 (Pfam)
1.1.27. Cation diffusion facilitator (1 family) 2.A.4 (TCDB) CL0184 (Pfam)
1.1.28. Resistance-nodulation-cell division (3 families) 2.A.6 (TCDB) CL0322 (Pfam)
1.1.29. Drug/Metabolite Transporter (DMT) (1 family) 2.A.7 (TCDB) CL0184 (Pfam)
1.1.30. Cytochrome oxidase biogenesis family (1 family) 2.A.9 (TCDB)
1.1.31. Tellurite-resistance/Dicarboxylate transporter (1 family) 2.A.16 (TCDB) PF03595 (Pfam)
1.1.32. Dicarboxylate/amino acid:Cation Symporter (DAACS) (1 family) 2.A.23 (TCDB) PF00375 (Pfam)
1.1.33. Bile acid:Na+ symporter (BASS) family (1 family) 2.A.28 (TCDB) PF01758 (Pfam)
1.1.34. Mitochondrial Carrier (MC) (1 family) 2.A.29 (TCDB) PF00153 (Pfam)
1.1.35. Sodium/Proton antiporter (1 family) 2.A.33 (TCDB) PF06965 (Pfam)
1.1.36. Chloride transporter (ClC) (1 family) 2.A.49 (TCDB) PF00654 (Pfam)
1.1.38. Multidrug/Oligosaccharidyl-lipid superfamily (1 family) 2.A.66 (TCDB) PF01554 (Pfam)
1.1.39. Bile/arsenite/riboflavin transporter (BART) (3 families)
1.1.43. Phosphotransferase system, EIIC superfamily (1 family) 4.A.1 (TCDB) CL0493 (Pfam)
1.1.44. Disulfide bond oxidoreductase-B (DsbB) (1 family) 5.A.2 (TCDB) PF02600 (Pfam)
1.1.45. Magnesium ion transporter-E (MgtE) (1 family) 9.A.19 (TCDB) PF03448 (Pfam)
1.1.46. Mercuric ion uptake (Mer) superfamily (1 family) 1.A.72 (TCDB) PF13493 (Pfam)
1.1.47. Signal transduction histidine kinase (1 family) 9.B.33 (TCDB) PF13493 (Pfam)
1.1.48. Putative sulfate transporter (CysZ) (1 family) 9.B.7 (TCDB)
1.1.49. P-loop containing nucleoside triphosphate hydrolase, transmembrane (1 family) CL0023 (Pfam)
1.1.50. Methane monooxygenase (1 family) PF02461 (Pfam)
1.1.51. Vitamin K epoxide reductase (1 family) PF07884 (Pfam)
1.1.52. Glycosyl transferase GT-C superfamily (1 family) CL0111 (Pfam)
1.1.53. Steroid oxidoreductase (1 family) CL0115 (Pfam)
1.1.54. Prokaryotic diacylglycerol kinase (1 family) PF01219 (Pfam)
1.1.55. LPS O-antigen chain length determinant protein (1 family) PF02706 (Pfam)
1.1.56. Sulfatase (1 family) PF00884 (Pfam)
1.1.57. Peptidase AD (2 families) 1.A.54 (TCDB) CL0130 (Pfam)
1.1.58. Peptidase family M50 (1 family) PF02163 (Pfam)
1.1.59. ClpP/Crotonase, transmembrane (1 family) CL0127 (Pfam)
1.1.60. Rhomboid protease (1 family) 9.B.104 (TCDB) CL0207 (Pfam)
1.1.61. MAPEG (Eicosanoid and Glutathione metabolism proteins) (1 family) PF01124 (Pfam)
1.1.62. Transmembrane protein containing HAMP domain (1 family) PF00672 (Pfam)
1.1.63. Peptidase SF (1 family) CL0299 (Pfam)
1.1.64. Sodium/calcium exchanger (1 family) 2.A.19 (TCDB) PF01699 (Pfam)
1.1.65. Concentrative nucleoside transporter (1 family) 2.A.41 (TCDB) PF07662 (Pfam)
1.1.66. Proton-translocating pyrophosphatase (1 family) 3.A.10 (TCDB) PF03030 (Pfam)
1.1.67. Transmembrane proteins 14 (1 family) PF03647 (Pfam)
1.1.68. Transmembrane protein 141 (1 family)
1.1.69. Hypoxia induced protein (1 family) PF04588 (Pfam)
1.1.70. Peptidase family M48 (1 family) PF01435 (Pfam)
1.1.71. Bacterial phosphoinositide phosphatase (1 family)
1.1.72. Ion transporter superfamily (1 family) CL0182 (Pfam)
1.1.73. Type IV (VirB) secretory system (1 family) 3.A.7 (TCDB) PF03743 (Pfam)
1.1.74. Calcium release-activated calcium (CRAC) channel (1 family) 1.A.52 (TCDB) PF07856 (Pfam)
1.1.75. Twin arginine targeting (Tat) family (2 families) 2.A.64 (TCDB)
1.1.76. Urea/amide channel (1 family) 1.A.29 (TCDB) PF02293 (Pfam)
1.1.77. Cellulose-conducting channel (1 family)
1.1.78. Nogo receptors (1 family) PF02453 (Pfam)
See list of these PDB codes

Alpha-helical polytopic (477 proteins)

Family Protein Name PDB ID Species Localization Num. Subunits Num. TM Sec. Structs. Hydrophobic Thickness or Depth (Å) Tilt Angle (°) ΔGtransfer (kcal/mol)
1.1.01.01. Bacteriorhodopsin, trimer, complex with annular lipids 2zzl Halobacterium salinarum Archaebac. 3 21 29.8 ± 0.6 0 ± 0 -119.0
1.1.01.01. Sensory Rhodopsin 1xio Anabaena sp. Bact. Gram-neg inner 1 7 31.9 ± 1.5 13 ± 4 -63.1
1.1.01.01. Sensory rhodopsin II, monomer 1h68 Natronomonas pharaonis Archaebac. 1 7 30.3 ± 1.5 15 ± 2 -60.0
1.1.01.01. Bacteriorhodopsin, from cubic phase 1ap9 Halobacterium salinarum Archaebac. 3 21 30.6 ± 1.2 0 ± 0 -97.8
1.1.01.01. Bacteriorhodopsin, monomer 1py6 Halobacterium salinarum Archaebac. 1 7 29.6 ± 2.2 24 ± 8 -59.7
1.1.01.01. Archaerhodopsin-2, trimeric 2ei4 Halobacterium sp. Archaebac. 3 21 30.5 ± 1.2 0 ± 1 -143.9
1.1.01.01. Bacteriorhodopsin, different loop conformaton 1fbk Halobacterium salinarum Archaebac. 3 21 30.0 ± 1.2 0 ± 0 -127.8
1.1.01.01. Bacteriorhodopsin 1m0l Halobacterium salinarum Archaebac. 3 21 31.8 ± 1.1 0 ± 1 -121.1
1.1.01.01. Archaerhodopsin-2 1vgo Halobacterium sp. Archaebac. 1 7 30.7 ± 1.3 18 ± 2 -73.1
1.1.01.01. Sensory rhodopsin II, tetramer 1h2s Natronomonas pharaonis Archaebac. 4 18 30.5 ± 1.1 0 ± 0 -123.4
1.1.01.01. Archaeal-type opsin 2 3ug9 Chlamydomonas reinhardtii Eukaryo. plasma 2 14 31.0 ± 1.2 0 ± 0 -100.3
1.1.01.01. Halorhodopsin 1e12 Halobacterium salinarum Archaebac. 3 21 31.8 ± 1.4 0 ± 1 -126.7
1.1.01.01. Halorhodopsin 3a7k Natronomonas pharaonis Archaebac. 3 21 33.8 ± 1.4 1 ± 0 -141.3
1.1.01.01. Proton-pumping rhodopsin-2 from algae 3am6 Acetabularia acetabulum Eukaryo. plasma 1 7 31.2 ± 1.6 10 ± 1 -65.4
1.1.01.01. Green-light absorbing proteorhodopsin 2l6x Gamma-proteobacterium Bact. Gram-neg inner 1 7 27.8 ± 1.3 18 ± 1 -55.2
1.1.01.01. Archaerhodopsin-1 1uaz Halobacterium sp. Archaebac. 1 7 31.8 ± 1.3 9 ± 2 -65.3
1.1.01.01. Xanthorhodopsin 3ddl Salinibacter ruber Bact. Gram-neg inner 1 7 28.2 ± 1.8 11 ± 0 -60.7
1.1.01.02. Opsin, active, retinal-free state, dimer 3cap Bos taurus Eukaryo. plasma 2 14 30.8 ± 1.1 0 ± 0 -130.1
1.1.01.02. Beta-2 adrenergic receptor, active state, complex with G-protein 3sn6 Homo sapiens Eukaryo. plasma 1 7 31.0 ± 1.6 8 ± 1 -68.2
1.1.01.02. Adenosine receptor A2a, inactive state, complex with antagonist 3eml Homo sapiens Eukaryo. plasma 1 7 31.8 ± 1.2 8 ± 12 -66.1
1.1.01.02. Rhodopsin, inactive, conformation 2 3oax Bos taurus Eukaryo. plasma 1 7 30.9 ± 1.4 11 ± 0 -73.6
1.1.01.02. Adenosine receptor A2a, partially active state, engineered, complex with agonist 2ydv Homo sapiens Eukaryo. plasma 1 7 31.0 ± 1.3 10 ± 0 -61.4
1.1.01.02. Beta-1 adrenergic receptor, inactive, multiple mutations 2vt4 Meleagris gallopavo Eukaryo. plasma 1 7 32.8 ± 1.6 3 ± 1 -74.6
1.1.01.02. Adenosine receptor A2a, complex with antagonist 3uza Homo sapiens Eukaryo. plasma 1 7 31.6 ± 0.6 8 ± 1 -72.5
1.1.01.02. Adenosine receptor A2a, inactive state, with annular lipids 4eiy Homo sapiens Eukaryo. plasma 1 7 32.2 ± 1.2 18 ± 0 -70.4
1.1.01.02. Opioid mu receptor 4dkl Mus musculus Eukaryo. plasma 2 14 32.0 ± 1.0 5 ± 0 -134.7
1.1.01.02. Squid rhodopsin, inactive, complex with inverse agonist 11-cis retinal 2ziy Todarodes pacificus Eukaryo. plasma 1 7 32.9 ± 1.7 11 ± 2 -75.1
1.1.01.02. Beta-2 adrenergic receptor, active state, complex with antibody 3p0g Homo sapiens Eukaryo. plasma 1 7 30.1 ± 1.4 9 ± 1 -62.9
1.1.01.02. Muscarinic acetylcholine receptor M2 3uon Homo sapiens Eukaryo. plasma 1 7 31.8 ± 2.1 4 ± 2 -68.5
1.1.01.02. Squid rhodopsin, inactive, complex with inverse agonist 11-cis retinal, dimer 2z73 Todarodes pacificus Eukaryo. plasma 2 14 32.9 ± 1.0 0 ± 1 -143.3
1.1.01.02. Adenosine receptor A2a, inactive state, engineered, complex with inverse agonist 3pwh Homo sapiens Eukaryo. plasma 1 7 31.0 ± 1.3 9 ± 0 -67.3
1.1.01.02. Rhodopsin, active (metarhodopsin II), complex with peptide of transducin 3pqr Bos taurus Eukaryo. plasma 1 7 31.8 ± 1.1 9 ± 1 -78.3
1.1.01.02. Beta-1 adrenergic receptor, inactive, complex with antagonist 2ycw Meleagris gallopavo Eukaryo. plasma 1 7 32.2 ± 1.3 2 ± 0 -77.8
1.1.01.02. Adenosine receptor A2a, complex with antibody 3vga Homo sapiens Eukaryo. plasma 1 7 30.4 ± 1.4 7 ± 2 -62.8
1.1.01.02. Nociceptin receptor 4ea3 Homo sapiens Eukaryo. plasma 1 7 32.0 ± 1.2 7 ± 1 -65.6
1.1.01.02. Beta-1 adrenergic receptor, inactive, dimer 4gpo Meleagris gallopavo Eukaryo. plasma 2 14 30.8 ± 1.2 0 ± 0 -144.8
1.1.01.02. Rhodopsin, partially active, photobleached 2i37 Bos taurus Eukaryo. plasma 1 7 31.9 ± 1.5 5 ± 1 -79.1
1.1.01.02. Beta-2 adrenergic receptor, inactive state, dimer 2rh1 Homo sapiens Eukaryo. plasma 2 14 31.8 ± 0.9 0 ± 1 -143.2
1.1.01.02. C-X-C chemokine receptor type 4, inactive, complex with antagonist 3oe6 Homo sapiens Eukaryo. plasma 1 7 35.3 ± 2.5 8 ± 7 -79.7
1.1.01.02. Rhodopsin, active (metarhodopsin II), without transducin peptide, dimer 3pxo Bos taurus Eukaryo. plasma 2 14 31.8 ± 1.2 0 ± 0 -125.4
1.1.01.02. Histamine H1 receptor 3rze Homo sapiens Eukaryo. plasma 1 7 32.0 ± 1.4 1 ± 1 -72.4
1.1.01.02. Neurotensin receptor type 1 4grv Rattus norvegicus Eukaryo. plasma 1 7 31.6 ± 1.1 4 ± 1 -75.1
1.1.01.02. 5-hydroxytryptamine receptor 2B 4ib4 Homo sapiens Eukaryo. plasma 1 7 34.0 ± 2.3 16 ± 2 -69.2
1.1.01.02. Rhodopsin, inactive state, a dimer 2i36 Bos taurus Eukaryo. plasma 2 14 30.0 ± 1.4 4 ± 4 -125.6
1.1.01.02. C-X-C chemokine receptor type 4, inactive, with cyclic peptide antagonist 3oe0 Homo sapiens Eukaryo. plasma 2 14 32.2 ± 2.0 5 ± 6 -133.2
1.1.01.02. Adenosine receptor A2a, partially active state, complex with agonist 3qak Homo sapiens Eukaryo. plasma 1 7 29.8 ± 1.2 9 ± 0 -70.0
1.1.01.02. Opioid delta receptor 4ej4 Mus musculus Eukaryo. plasma 1 7 34.4 ± 0.8 11 ± 6 -73.2
1.1.01.02. C-X-C chemokine receptor type 1 2lnl Homo sapiens Eukaryo. plasma 1 7 30.2 ± 0.9 19 ± 6 -54.4
1.1.01.02. 5-hydroxytryptamine receptor 1B, conformation 1 4iar Homo sapiens Eukaryo. plasma 1 7 33.6 ± 1.8 7 ± 1 -76.4
1.1.01.02. Rhodopsin, inactive, complex with inverse agonist, 11-cis retinal 1gzm Bos taurus Eukaryo. plasma 1 7 32.2 ± 1.5 11 ± 1 -75.6
1.1.01.02. Rhodopsin, constitutively active mutant (metarhodopsin II), dimer 2x72 Bos taurus Eukaryo. plasma 2 14 30.0 ± 0.6 0 ± 0 -132.0
1.1.01.02. TM1-TM2 fragment of fungal STE2 receptor 2k9p Saccharomyces cerevisiae Eukaryo. plasma 1 2 29.8 ± 3.1 21 ± 4 -10.5
1.1.01.02. C-X-C chemokine receptor type 4, inactive, dimer, complex with antagonist 3odu Homo sapiens Eukaryo. plasma 2 17 31.2 ± 1.1 0 ± 0 -129.5
1.1.01.02. Sphingosine 1-phosphate receptor 1 3v2y Homo sapiens Eukaryo. plasma 1 7 32.2 ± 1.4 10 ± 0 -65.9
1.1.01.02. 5-hydroxytryptamine receptor 1B, conformation 2 4iaq Homo sapiens Eukaryo. plasma 1 7 34.4 ± 1.7 6 ± 1 -77.4
1.1.01.02. Melanocortin-4 receptor model (active state) with agonist NDP-MSH 2iqr Homo sapiens Eukaryo. plasma 1 7 33.5 ± 2.0 24 ± 0 -60.6
1.1.01.02. Dopamine D3 receptor 3pbl Homo sapiens Eukaryo. plasma 1 7 33.0 ± 1.8 8 ± 1 -56.6
1.1.01.02. Muscarinic acetylcholine receptor M3 4daj Rattus norvegicus Eukaryo. plasma 1 7 32.2 ± 1.2 5 ± 0 -75.8
1.1.01.02. Rhodopsin, inactive, conformation 3 1u19 Bos taurus Eukaryo. plasma 1 7 31.2 ± 1.5 12 ± 1 -71.9
1.1.01.02. Melanocortin-4 receptor model (inactive state) with antagonist AGRP 2iqv Homo sapiens Eukaryo. plasma 1 7 31.9 ± 1.1 19 ± 0 -49.1
1.1.01.02. Beta-1 adrenergic receptor, inactive, complex with agonist 2y02 Meleagris gallopavo Eukaryo. plasma 1 7 31.4 ± 1.3 2 ± 0 -76.9
1.1.01.02. Beta-2 adrenergic receptor, inactive state 4gbr Homo sapiens Eukaryo. plasma 1 7 31.6 ± 1.3 7 ± 1 -71.7
1.1.01.02. Opioid kappa receptor 4djh Homo sapiens Eukaryo. plasma 2 14 32.0 ± 0.8 1 ± 0 -146.6
1.1.01.02. Thrombin (proteinase-activated) receptor 1, PAR1 3vw7 Homo sapiens Eukaryo. plasma 1 7 33.4 ± 1.9 1 ± 0 -72.2
1.1.01.03. Ectodomain of G-protein coupled receptor Mth 1fjr Drosophila melanogaster Eukaryo. plasma 1 0 1.8 ± 1.5 56 ± 13 -4.3
1.1.01.04. Smoothened homolog 4jkv Homo sapiens Eukaryo. plasma 2 14 31.9 ± 1.2 0 ± 0 -98.5
1.1.02.01. Photosynthetic reaction center 2j8c Rhodobacter sphaeroides Bact. Gram-neg inner 3 11 31.8 ± 0.8 2 ± 0 -129.6
1.1.02.01. Photosynthetic reaction center, more complete structure 2j8d Rhodobacter sphaeroides Bact. Gram-neg inner 3 11 31.6 ± 1.0 5 ± 0 -135.5
1.1.02.01. Photosynthetic reaction center, complex with cytochrome c 1eys Thermochromatium tepidum Bact. Gram-neg inner 3 11 31.6 ± 1.0 2 ± 0 -116.0
1.1.02.01. Photosynthetic reaction center, complex with cytochrome c 1l9b Rhodobacter sphaeroides Bact. Gram-neg inner 3 11 31.6 ± 0.8 3 ± 0 -127.3
1.1.02.01. Photosynthetic reaction center, complex with cytochrome c 1dxr Rhodopseudomonas viridis Bact. Gram-neg inner 3 11 31.8 ± 0.7 5 ± 0 -121.8
1.1.02.02. Photosystem I 3lw5 Pisum sativum Thylakoid 11 46 29.8 ± 0.1 2 ± 0 -311.1
1.1.02.02. Photosystem I 1jb0 Thermosynechococcus elongatus Thylakoid 9 32 31.4 ± 0.4 1 ± 0 -285.7
1.1.02.02. Photosystem I, trimeric complex 3pcq Thermosynechococcus elongatus Thylakoid 27 96 29.8 ± 0.8 0 ± 0 -429.6
1.1.02.03. Photosystem II 3arc Thermosynechococcus vulcanus Thylakoid 32 70 31.8 ± 0.0 0 ± 0 -406.5
1.1.02.03. Photosystem II 3bz1 Thermosynechococcus elongatus Thylakoid 34 72 31.6 ± 0.4 0 ± 0 -409.7
1.1.02.03. Photosystem II 3a0b Thermosynechococcus vulcanus Thylakoid 34 72 31.8 ± 0.4 0 ± 0 -397.1
1.1.02.03. Photosystem II, monomeric form 3kzi Thermosynechococcus elongatus Thylakoid 16 36 31.8 ± 0.5 0 ± 0 -310.1
1.1.03.01. Light-harvesting complex LH2 1nkz Rhodopseudomonas acidophila Bact. Gram-neg inner 18 18 31.8 ± 0.6 0 ± 0 -193.5
1.1.03.01. Light-harvesting protein B-870, beta chain 1wrg Rhodospirillum rubrum Bact. Gram-neg inner 1 1 27.0 ± 4.7 44 ± 1 -23.9
1.1.03.01. Light-harvesting complex LH3 1ijd Rhodopseudomonas acidophila Bact. Gram-neg inner 18 18 29.8 ± 0.7 0 ± 0 -174.6
1.1.03.01. Light-harvesting protein B-875, beta chain 1jo5 Rhodobacter sphaeroides Bact. Gram-neg inner 1 1 29.6 ± 1.5 20 ± 2 -24.7
1.1.03.01. Light-harvesting complex 1lgh Rhodospirillum molischianum Bact. Gram-neg inner 16 16 29.7 ± 0.5 0 ± 0 -163.4
1.1.03.01. Light-harvesting complex LH1, alpha chain 1xrd Rhodospirillum rubrum Bact. Gram-neg inner 1 1 30.3 ± 3.1 30 ± 4 -30.5
1.1.03.02. Light-harvesting complex CP29 3pl9 Spinacia oleracea Thylakoid 1 3 29.8 ± 1.6 2 ± 2 -66.6
1.1.03.02. Light-Harvesting Complex II 1rwt Spinacia oleracea Thylakoid 3 9 30.0 ± 0.7 0 ± 0 -154.0
1.1.03.02. Light-Harvesting Complex II 2bhw Pisum sativum Thylakoid 3 9 29.4 ± 1.0 0 ± 0 -123.2
1.1.04.01. Respiratory complex I 3rko Escherichia coli Bact. Gram-neg inner 6 58 29.6 ± 0.0 9 ± 0 -236.7
1.1.04.01. Respiratory complex I 4hea Thermus thermophilus Bact. Gram-neg inner 7 67 29.8 ± 0.5 10 ± 0 -299.7
1.1.05.01. Polysulfide reductase, substrate-bound state 2vpx Thermus thermophilus Bact. Gram-neg inner 2 16 27.1 ± 1.1 0 ± 1 -103.3
1.1.05.01. Polysulfide reductase, inactive state 2vpz Thermus thermophilus Bact. Gram-neg inner 2 16 29.8 ± 1.5 1 ± 0 -105.2
1.1.05.02. Formate dehydrogenase 1kqf Escherichia coli Bact. Gram-neg inner 6 15 33.7 ± 1.1 0 ± 0 -141.9
1.1.05.03. Respiratory Nitrate Reductase 1q16 Escherichia coli Bact. Gram-neg inner 2 10 30.1 ± 0.9 0 ± 0 -126.9
1.1.05.04. Succinate dehydrogenase (mitochondrial respiratory complex II) 1yq3 Gallus gallus Mitochon. inner 2 6 29.6 ± 1.8 4 ± 6 -56.7
1.1.05.04. Succinate dehydrogenase (mitochondrial respiratory complex II) 3vr8 Ascaris suum Mitochon. inner 2 6 30.4 ± 1.2 10 ± 1 -57.1
1.1.05.04. Fumarate reductase 2bs2 Wolinella succinogenes Bact. Gram-neg inner 2 10 31.4 ± 1.3 2 ± 0 -118.8
1.1.05.04. Succinate dehydrogenase (mitochondrial respiratory complex II) 1zoy Sus scrofa Mitochon. inner 2 6 29.8 ± 1.1 3 ± 6 -52.6
1.1.05.05. Fumarate reductase 1kf6 Escherichia coli Bact. Gram-neg inner 2 6 30.2 ± 1.2 14 ± 2 -65.6
1.1.05.05. Succinate dehydrogenase 1nek Escherichia coli Bact. Gram-neg inner 6 18 32.0 ± 0.6 0 ± 0 -183.5
1.1.05.06. Ni/Fe-hydrogenase complex 4gd3 Escherichia coli Bact. Gram-neg inner 3 6 27.2 ± 1.4 9 ± 1 -42.4
1.1.06.01. Cytochrome b6f 2e74 Mastigocladus laminosus Thylakoid 16 26 31.2 ± 0.8 0 ± 0 -222.1
1.1.06.01. Cytochrome b6f 2zt9 Nostoc sp. Thylakoid 16 26 31.2 ± 1.0 0 ± 1 -214.2
1.1.06.01. Cytochrome b6f, slightly different structure 1 2d2c Mastigocladus laminosus Thylakoid 16 26 28.6 ± 0.6 0 ± 0 -156.9
1.1.06.01. Cytochrome bc1, mitochondrial 1l0l Bos taurus Mitochon. inner 12 26 30.0 ± 0.6 0 ± 0 -186.6
1.1.06.01. Cytochrome bc1, mitochondrial 3h1j Gallus gallus Mitochon. inner 10 24 28.2 ± 0.6 0 ± 0 -184.8
1.1.06.01. Cytochrome b6f, slightly different structure 2 4h13 Mastigocladus laminosus Thylakoid 16 26 31.6 ± 0.6 0 ± 0 219.6
1.1.06.01. Cytochrome bc1, mitochondrial 3cx5 Saccharomyces cerevisiae Mitochon. inner 10 24 27.2 ± 0.6 0 ± 0 -173.9
1.1.06.01. Cytochrome bc1, mitochondrial, different structure of complex 1 2fyu Bos taurus Mitochon. inner 12 26 29.8 ± 0.5 0 ± 0 -182.9
1.1.06.01. Cytochrome bc1, bacterial 2yiu Paracoccus denitrificans Bact. Gram-neg inner 6 20 29.8 ± 0.5 0 ± 0 -188.8
1.1.06.01. Cytochrome b6f 1q90 Chlamydomonas reinhardtii Thylakoid 16 26 31.8 ± 1.0 0 ± 1 -226.4
1.1.06.01. Cytochrome bc1, mitochondrial, different structure of complex 3 2a06 Bos taurus Mitochon. inner 9 23 29.8 ± 0.3 2 ± 0 -166.2
1.1.06.01. Cytochrome bc1, bacterial 2qjy Rhodobacter sphaeroides Bact. Gram-neg inner 6 20 30.2 ± 0.6 0 ± 0 -188.6
1.1.06.01. Cytochrome bc1, mitochondrial, different structure of complex 2 1pp9 Bos taurus Mitochon. inner 10 26 29.8 ± 0.3 6 ± 0 -179.3
1.1.06.01. Cytochrome bc1, bacterial 1zrt Rhodobacter capsulatus Bact. Gram-neg inner 6 20 29.9 ± 0.9 0 ± 0 -178.6
1.1.07.01. Bacterial cytochrome c oxidase 3s8g Thermus thermophilus Bact. Gram-neg inner 3 15 31.2 ± 1.1 7 ± 0 -112.3
1.1.07.01. Bacterial cytochrome c oxidase 1m56 Rhodobacter sphaeroides Bact. Gram-neg inner 4 22 29.6 ± 1.8 3 ± 0 -173.7
1.1.07.01. Bacterial cytochrome c oxidase 1qle Paracoccus denitrificans Bact. Gram-neg inner 4 22 31.7 ± 1.3 4 ± 0 -167.4
1.1.07.01. Ubiquinol Oxidase 1fft Escherichia coli Bact. Gram-neg inner 3 19 29.5 ± 0.6 12 ± 0 -82.3
1.1.07.01. Mitochondrial cytochrome c oxidase 1v55 Bos taurus Mitochon. inner 20 56 27.8 ± 0.9 0 ± 0 -209.1
1.1.07.01. Bacterial cytochrome c oxidase, cbb3 type 3mk7 Pseudomonas stutzeri Bact. Gram-neg inner 4 17 32.8 ± 1.2 4 ± 4 -119.2
1.1.07.01. Nitric oxide reductase 3o0r Pseudomonas aeruginosa Bact. Gram-neg inner 2 13 31.7 ± 1.6 5 ± 0 -107.7
1.1.07.01. Nitric oxide reductase 3ayf Bacillus stearothermophilus Bact. Gram-pos plas. 1 14 31.6 ± 0.8 8 ± 0 -109.3
1.1.07.01. EM model of mitochondrial supercomplex 2ybb Bos taurus Mitochon. inner 26 115 30.0 ± 0.3 9 ± 0 -310.3
1.1.07.01. Bacterial cytochrome c oxidase, caa3-type 2yev Thermus thermophilus Bact. Gram-neg inner 3 21 31.2 ± 0.8 6 ± 0 -146.1
1.1.08.01. F1F0 ATP synthase, F0 complex, conformation 1 2x2v Bacillus pseudofirmus Bact. Gram-pos plas. 13 26 35.3 ± 1.2 0 ± 0 -137.7
1.1.08.01. F1F0 ATP synthase, F0 complex, conformation 2 3zo6 Bacillus pseudofirmus Bact. Gram-pos plas. 12 24 39.6 ± 1.1 1 ± 0 -130.6
1.1.08.01. F1F0 ATP synthase subunit c 1wu0 Bacillus ps3 Bact. Gram-pos plas. 1 2 31.9 ± 2.7 44 ± 1 -23.2
1.1.08.01. F1F0 ATP synthase, F0F1 complex 2xok Saccharomyces cerevisiae Mitochon. inner 10 20 35.3 ± 1.3 0 ± 0 -58.9
1.1.08.01. ATP synthase of chloroplast 3v3c Pisum sativum Thylakoid 14 28 32.0 ± 1.0 0 ± 0 -111.5
1.1.08.01. F1F0 ATP synthase subunit c 1a91 Escherichia coli Bact. Gram-neg inner 1 2 36.1 ± 6.7 21 ± 3 -21.4
1.1.08.01. F1F0 ATP synthase, F0 complex 4f4s Saccharomyces cerevisiae Mitochon. inner 10 20 38.4 ± 1.3 0 ± 0 -89.9
1.1.08.01. ATP synthase of chloroplast 2w5j Spinacia oleracea Thylakoid 14 28 32.8 ± 0.7 0 ± 0 -116.3
1.1.08.01. F1F0 ATP synthase, F0 complex 1c17 Escherichia coli Bact. Gram-neg inner 13 28 34.6 ± 1.2 4 ± 0 -149.9
1.1.08.01. F1F0 ATP synthase, F0F1 complex, more complete model 4b2q Saccharomyces cerevisiae Mitochon. inner 10 20 38.4 ± 0.9 0 ± 0 -115.7
1.1.08.01. F-type Sodium ATPase 1yce Ilyobacter tartaricus Bact. Gram-neg inner 11 22 37.0 ± 0.5 0 ± 0 -104.0
1.1.08.01. V-type Sodium ATPase 2bl2 Enterococcus hirae Bact. Gram-neg inner 10 40 35.6 ± 0.7 0 ± 0 -189.6
1.1.08.01. F1F0 ATP synthase, F0 complex 2xqu Arthrospira platensis Thylakoid 15 30 31.8 ± 0.8 0 ± 0 -129.7
1.1.08.01. F1F0 ATP synthase, F0F1 complex, different conformation 3zry Saccharomyces cerevisiae Mitochon. inner 10 20 33.6 ± 1.9 4 ± 0 -56.0
1.1.08.01. ATP synthase subunit b 1b9u Escherichia coli Bact. Gram-neg inner 1 1 29.8 ± 4.0 41 ± 2 -23.1
1.1.09.01. Calcium ATPase, E2-Pi state, conformation 2 3ar8 Oryctolagus cuniculus Endoplasm. reticulum 1 10 28.6 ± 1.8 19 ± 0 -60.6
1.1.09.01. Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 3tlm Bos taurus Endoplasm. reticulum 1 10 26.8 ± 0.0 22 ± 0 -57.4
1.1.09.01. Calcium ATPase, E2 state (Ca-free), conformation 5 1kju Oryctolagus cuniculus Endoplasm. reticulum 1 10 33.8 ± 0.2 26 ± 1 -68.6
1.1.09.01. Calcium ATPase, E1-2Ca state, conformation 3 1su4 Oryctolagus cuniculus Endoplasm. reticulum 1 10 30.0 ± 2.7 26 ± 1 -68.6
1.1.09.01. Calcium ATPase, E2 state (Ca-free), conformation 6 2zbe Oryctolagus cuniculus Endoplasm. reticulum 1 10 28.0 ± 0.7 16 ± 0 -55.4
1.1.09.01. Calcium ATPase, E1-2Ca state, conformation 4 2c9m Oryctolagus cuniculus Endoplasm. reticulum 1 10 29.8 ± 1.2 27 ± 1 -54.3
1.1.09.01. Calcium ATPase, E1-2Ca state, conformation 1 3ar2 Oryctolagus cuniculus Endoplasm. reticulum 1 10 29.6 ± 0.9 25 ± 0 -70.9
1.1.09.01. Calcium ATPase, E2 state (Ca-free), conformation 8 2zbg Oryctolagus cuniculus Endoplasm. reticulum 1 10 30.0 ± 1.7 21 ± 0 -66.5
1.1.09.01. Calcium ATPase, E2-Pi state, conformation 1 1wpg Oryctolagus cuniculus Endoplasm. reticulum 1 10 30.6 ± 1.1 20 ± 0 -70.4
1.1.09.01. Calcium ATPase, E1 Mg2+ state, complex with sarcolipin 3w5a Oryctolagus cuniculus Endoplasm. reticulum 2 11 26.8 ± 0.7 30 ± 0 -67.4
1.1.09.01. Calcium ATPase, E2-Pi state, conformation 4 3b9r Oryctolagus cuniculus Endoplasm. reticulum 1 10 26.8 ± 0.0 25 ± 0 -44.1
1.1.09.01. Copper efflux ATPase 3rfu Legionella pneumophila Bact. Gram-neg inner 1 8 30.0 ± 0.4 16 ± 1 -72.1
1.1.09.01. Calcium ATPase, E1-ATP state 1t5s Oryctolagus cuniculus Endoplasm. reticulum 1 10 29.7 ± 1.6 22 ± 1 -58.6
1.1.09.01. Calcium ATPase, E2-Pi state, conformation 3 3b9b Oryctolagus cuniculus Endoplasm. reticulum 1 10 29.9 ± 1.6 16 ± 2 -58.1
1.1.09.01. Calcium ATPase, E1 Ca2+ state, complex with sarcolipin 4h1w Oryctolagus cuniculus Endoplasm. reticulum 2 11 27.6 ± 1.0 27 ± 1 -67.6
1.1.09.01. Calcium ATPase, E2-Pi state, conformation 5 3fpb Oryctolagus cuniculus Endoplasm. reticulum 1 10 27.0 ± 2.3 23 ± 0 -64.9
1.1.09.01. Copper efflux ATPase, CopA, alternative conformation 3j09 Archaeoglobus fulgidus Archaebac. 2 16 27.0 ± 0.1 1 ± 0 -23.5
1.1.09.01. Sodium-potassium pump, E2-Pi state 2zxe Squalus acanthias Eukaryo. plasma 3 12 31.9 ± 1.8 9 ± 0 -96.3
1.1.09.01. Sodium-potassium pump, E2-Pi state, slightly different conf. 3kdp Sus scrofa Eukaryo. plasma 3 12 31.4 ± 1.4 7 ± 0 -95.3
1.1.09.01. Calcium ATPase, E1P-ADP state 2zbd Oryctolagus cuniculus Endoplasm. reticulum 1 10 31.8 ± 1.4 22 ± 2 -70.6
1.1.09.01. Calcium ATPase, E2 state (Ca-free), conformation 2 2by4 Oryctolagus cuniculus Endoplasm. reticulum 1 10 29.8 ± 1.3 24 ± 1 -63.7
1.1.09.01. Calcium ATPase, E2-Pi state, conformation 6 1xp5 Oryctolagus cuniculus Endoplasm. reticulum 1 10 27.4 ± 1.1 25 ± 0 -58.5
1.1.09.01. Copper efflux ATPase, CopA 3j08 Archaeoglobus fulgidus Archaebac. 2 16 27.6 ± 0.8 0 ± 0 -72.3
1.1.09.01. Sodium-potassium pump, E2-Pi state 3b8e Sus scrofa Eukaryo. plasma 3 12 30.7 ± 0.9 12 ± 0 -93.6
1.1.09.01. Sodium-potassium pump, gastric 2xzb Sus scrofa Eukaryo. plasma 2 11 29.7 ± 1.2 9 ± 0 -91.4
1.1.09.01. Sodium-potassium pump, gastric, different conformation 2yn9 Sus scrofa Eukaryo. plasma 2 11 30.6 ± 0.8 10 ± 0 -85.9
1.1.09.01. Calcium ATPase, E2 state, Ca-free, conformation 3 2ear Oryctolagus cuniculus Endoplasm. reticulum 1 10 30.0 ± 1.2 19 ± 1 -58.4
1.1.09.01. Calcium ATPase, E2-Pi state, conformation 7 3n5k Oryctolagus cuniculus Endoplasm. reticulum 1 10 28.4 ± 1.3 22 ± 2 -64.8
1.1.09.01. Plasma membrane ATPase 2, E1-ATP state 3b8c Arabidopsis thaliana Eukaryo. plasma 1 10 29.5 ± 1.5 9 ± 0 -56.8
1.1.09.01. Sodium-potassium pump, different conformation 3n23 Sus scrofa Eukaryo. plasma 3 12 29.9 ± 0.9 6 ± 0 -96.0
1.1.09.01. Calcium ATPase, E2 state (Ca-free), conformation 1 2agv Oryctolagus cuniculus Endoplasm. reticulum 1 10 29.7 ± 2.2 20 ± 2 -61.5
1.1.09.01. Calcium ATPase, E2 state, Ca-free, conformation 7 3ar9 Oryctolagus cuniculus Endoplasm. reticulum 1 10 29.0 ± 0.9 20 ± 0 -73.8
1.1.09.01. Calcium ATPase, E2 state (Ca-free), conformation 4 3fps Oryctolagus cuniculus Endoplasm. reticulum 1 10 30.0 ± 0.9 16 ± 0 -53.5
1.1.09.01. Calcium ATPase, E1-2Ca state, conformation 2 3ba6 Oryctolagus cuniculus Endoplasm. reticulum 1 10 29.8 ± 0.7 19 ± 0 -59.4
1.1.09.01. Plasma membrane ATPase 1mhs Neurospora crassa Eukaryo. plasma 2 20 29.5 ± 0.2 7 ± 0 -109.6
1.1.10.01. ABC transporter BtuCD, symmetric structure 1l7v Escherichia coli Bact. Gram-neg inner 2 22 30.7 ± 1.1 0 ± 1 -121.0
1.1.10.01. ABC transporter BtuCD, complex with BtuF, structure 2 4dbl Escherichia coli Bact. Gram-neg inner 2 20 29.4 ± 1.0 4 ± 0 -123.4
1.1.10.01. ABC transporter BtuCD, nucleotide-bound state 4fi3 Escherichia coli Bact. Gram-neg inner 2 20 29.0 ± 1.0 0 ± 0 -118.3
1.1.10.01. ABC transporter permease HI1471 2nq2 Haemophilus influenzae Bact. Gram-neg inner 2 20 31.9 ± 0.9 1 ± 1 -124.2
1.1.10.01. ABC transporter BtuCD, complex with BtuF, structure 1 2qi9 Escherichia coli Bact. Gram-neg inner 2 22 29.4 ± 0.9 4 ± 4 -123.5
1.1.10.01. Hemin transport system permease, HmuU 4g1u Yersinia pestis Bact. Gram-neg inner 2 20 29.8 ± 0.5 0 ± 0 -114.3
1.1.10.02. Molybdate transporter ModBC, open state 3d31 Methanosarcina acetivorans Archaebac. 2 12 29.8 ± 1.5 1 ± 0 -91.6
1.1.10.02. Methionine importer MetNI, conformation 2 3tuj Escherichia coli Bact. Gram-neg inner 2 10 30.4 ± 1.3 7 ± 1 -84.5
1.1.10.02. Methionine importer MetNI, conformation 3 3dhw Escherichia coli Bact. Gram-neg inner 2 10 29.2 ± 1.0 1 ± 0 -82.5
1.1.10.02. Methionine importer MetNI, conformation 1 3tui Escherichia coli Bact. Gram-neg inner 2 10 30.2 ± 1.3 1 ± 1 -81.0
1.1.10.02. Maltose transporter MalFGK, a pre-translocation state 3puz Escherichia coli Bact. Gram-neg inner 2 14 29.0 ± 0.8 7 ± 0 -107.2
1.1.10.02. Maltose transporter MalFGK, inward conformation, TMH 1 deleted 3fh6 Escherichia coli Bact. Gram-neg inner 2 13 29.9 ± 0.6 3 ± 1 -97.8
1.1.10.02. Molybdate transporter ModBC, open state 2onk Archaeoglobus fulgidus Archaebac. 2 12 32.0 ± 1.7 0 ± 1 -100.7
1.1.10.02. Maltose transporter MalFGK, outward conformation 3puw Escherichia coli Bact. Gram-neg inner 2 14 29.8 ± 1.3 3 ± 1 -94.0
1.1.10.03. ABC transporter, inward-facing conformation 3qf4 Thermotoga maritima Bact. Gram-neg inner 2 12 32.0 ± 0.8 2 ± 0 -104.9
1.1.10.03. Multidrug ABC transporter SAV1866, closed state 2hyd Staphylococcus aureus Bact. Gram-pos plas. 2 12 31.8 ± 1.7 3 ± 3 -110.5
1.1.10.03. Lipid flippase MsbA, closed state 3b5x Vibrio cholerae Bact. Gram-neg inner 2 12 30.2 ± 1.0 0 ± 0 -58.7
1.1.10.03. Lipid flippase MsbA, open state 3b60 Salmonella enterica Bact. Gram-neg inner 2 12 31.8 ± 0.9 0 ± 0 -98.5
1.1.10.04. P-glycoprotein, inward-facing conformation 3g5u Mus musculus Eukaryo. plasma 1 12 31.8 ± 1.2 4 ± 0 -100.6
1.1.10.04. Multidrug resistance protein pgp-1 4f4c Caenorhabditis elegans Eukaryo. plasma 1 14 32.0 ± 1.8 6 ± 0 -105.1
1.1.10.05. Mitochondrial ABC transporter ABCB10, conformation 4 3zdq Homo sapiens Mitochon. inner 2 12 30.8 ± 0.5 1 ± 0 -71.8
1.1.10.05. Mitochondrial ABC transporter ABCB10, conformation 3 4ayx Homo sapiens Mitochon. inner 2 12 30.0 ± 0.6 0 ± 0 -76.8
1.1.10.05. Mitochondrial ABC transporter ABCB10, conformation 1 4ayt Homo sapiens Mitochon. inner 2 12 30.4 ± 0.8 0 ± 0 -79.7
1.1.10.05. Mitochondrial ABC transporter ABCB10, conformation 2 4ayw Homo sapiens Mitochon. inner 2 12 29.0 ± 0.8 0 ± 0 -65.8
1.1.11.01. Ribosome-SecYE complex 3j01 Escherichia coli Bact. Gram-neg inner 2 13 28.6 ± 0.0 5 ± 0 -86.4
1.1.11.01. Protein translocase SecY, closed state 2zqp Thermus thermophilus Bact. Gram-neg inner 2 11 29.8 ± 0.4 9 ± 0 -99.4
1.1.11.01. Protein translocase SecY, closed state, mutant 1rh5 Methanococcus jannaschii Archaebac. 3 12 29.0 ± 1.1 10 ± 0 -93.4
1.1.11.01. Protein translocase SecY, partialy open 3mp7 Pyrococcus furiosus Archaebac. 2 10 30.1 ± 1.0 5 ± 6 -94.0
1.1.11.01. Protein translocase SecY, complex with ribosome 1 3dkn Methanococcus jannaschii Archaebac. 3 12 27.8 ± 1.8 2 ± 0 -80.9
1.1.11.01. Protein translocase SecY, mutant with half-plug (TM2a) deletion 2yxq Methanococcus jannaschii Archaebac. 3 12 29.2 ± 1.1 6 ± 0 -89.1
1.1.11.01. Protein translocase SecY, closed state 1rhz Methanococcus jannaschii Archaebac. 3 12 29.4 ± 1.0 5 ± 0 -89.2
1.1.11.01. Protein translocase SecY, complex with SecA 3din Thermotoga maritima Bact. Gram-neg inner 3 13 26.9 ± 0.1 5 ± 0 -63.3
1.1.11.01. Protein translocase Sec61, complex with ribosome 2wwb Canis lupus familiaris Endoplasm. reticulum 3 12 26.3 ± 0.5 13 ± 0 -60.5
1.1.11.01. Protein translocase SecY, pre-open state 2zjs Thermus thermophilus Bact. Gram-neg inner 2 11 30.7 ± 1.2 7 ± 0 -100.7
1.1.11.01. Protein translocase SecY, complex with ribosome 2 3bo0 Methanococcus jannaschii Archaebac. 3 12 29.6 ± 1.2 6 ± 2 -78.0
1.1.11.01. Protein translocase SecY, mutant with full-plug (TM2a) deletion 2yxr Methanococcus jannaschii Archaebac. 3 12 29.7 ± 0.8 4 ± 4 -95.6
1.1.12.01. Multi-ligand gated K(+) channel, TrkA 4gx5 Geobacter sulfurreducens Bact. Gram-neg inner 4 8 31.6 ± 0.7 0 ± 0 -94.6
1.1.12.01. Potassium channel KcsA, full-length, closed 3eff Streptomyces lividans Bact. Gram-pos plas. 4 12 31.8 ± 1.3 0 ± 0 -107.3
1.1.12.01. Potassium channel KcsA, 14.5 A opening conformer 3fb5 Streptomyces lividans Bact. Gram-pos plas. 4 8 33.7 ± 0.9 0 ± 0 -115.9
1.1.12.01. Potassium channel KvAP, sensor domain, NMR model 2kyh Aeropyrum pernix Archaebac. 1 5 28.6 ± 1.4 19 ± 4 -44.6
1.1.12.01. Bacterial cyclic nucleotide regulated ion channel 3beh Rhizobium loti Bact. Gram-neg inner 4 28 30.6 ± 0.8 0 ± 0 -205.7
1.1.12.01. Potassium channel subfamily K member 4, different conformation 4i9w Homo sapiens Eukaryo. plasma 2 8 30.8 ± 1.4 6 ± 0 -106.2
1.1.12.01. Voltage-gated sodium channel NavAb 3rvy Arcobacter butzleri Bact. Gram-neg inner 4 24 29.6 ± 0.4 0 ± 0 -216.9
1.1.12.01. NaK potassium channel, open state 3e86 Bacillus cereus Bact. Gram-pos plas. 4 12 27.6 ± 0.9 0 ± 0 -90.0
1.1.12.01. Bacterial cyclic nucleotide regulated ion channel, different conformation 2zd9 Rhizobium loti Bact. Gram-neg inner 4 24 31.6 ± 1.2 0 ± 0 -192.8
1.1.12.01. Calcium-gated potassium channel MthK 3ldc Methanobacterium thermoautotrophicum Archaebac. 4 8 29.8 ± 0.8 0 ± 0 -72.4
1.1.12.01. NaK potassium channel, closed state 2ahy Bacillus cereus Bact. Gram-pos plas. 4 12 29.5 ± 0.7 0 ± 1 -105.7
1.1.12.01. Voltage-gated sodium channel NavAb, different conformation 4ekw Arcobacter butzleri Bact. Gram-neg inner 4 24 29.4 ± 0.5 0 ± 0 -201.0
1.1.12.01. Potassium channel KvAP, sensor domain 1ors Aeropyrum pernix Archaebac. 1 5 31.5 ± 2.2 19 ± 1 -50.3
1.1.12.01. Voltage-gated K+ channel 4h33 Listeria monocytogenes Bact. Gram-pos plas. 4 8 33.2 ± 1.9 0 ± 0 -115.9
1.1.12.01. Potassium channel KcsA, 16 A opening conformer 3fb6 Streptomyces lividans Bact. Gram-pos plas. 4 8 30.2 ± 1.0 0 ± 0 -86.1
1.1.12.01. Potassium channel KvAP 1orq Aeropyrum pernix Archaebac. 4 12 29.3 ± 1.6 0 ± 0 -78.6
1.1.12.01. Potassium channel KcsA, 20 A opening conformer 3fb8 Streptomyces lividans Bact. Gram-pos plas. 4 8 29.8 ± 0.4 0 ± 0 -68.2
1.1.12.01. Potassium channel subfamily K member 4 3um7 Homo sapiens Eukaryo. plasma 2 12 30.8 ± 1.2 3 ± 0 -93.2
1.1.12.01. Voltage gated sodium channel, open conformation 4f4l Magnetococcus marinus Bact. Gram-neg inner 4 8 28.2 ± 1.3 1 ± 0 -74.6
1.1.12.01. Potassium channel KcsA, full length, open 3pjs Streptomyces lividans Bact. Gram-pos plas. 4 8 31.6 ± 1.2 1 ± 1 -87.3
1.1.12.01. Potassium channel KcsA, open inactivated state 3f5w Streptomyces lividans Bact. Gram-pos plas. 4 8 29.2 ± 0.7 0 ± 0 -83.5
1.1.12.01. Potassium channel KcsA, complex with Rb+ 3fb7 Streptomyces lividans Bact. Gram-pos plas. 4 8 28.6 ± 1.2 0 ± 0 -79.0
1.1.12.01. Potassium channel Kv1.2 - Kv2.1. chimera, in membrane-like environment 2r9r Rattus norvegicus Eukaryo. plasma 4 28 30.8 ± 0.6 0 ± 0 -252.0
1.1.12.01. Potassium channel subfamily K member 1 3ukm Homo sapiens Eukaryo. plasma 2 12 31.8 ± 1.0 0 ± 0 -108.7
1.1.12.01. NaK-NavSulP chimera channel 3vou Sulfitobacter sp. Bact. Gram-neg inner 4 8 30.4 ± 0.8 0 ± 0 -100.1
1.1.12.01. Potassium channel KscA, complex with charibdotoxin 2a9h Streptomyces lividans Bact. Gram-pos plas. 4 8 31.8 ± 1.4 0 ± 1 -105.1
1.1.12.01. NaK potassium channel, different strain of Bacillus cereus 3ouf Bacillus cereus Bact. Gram-pos plas. 4 12 27.9 ± 1.3 0 ± 0 -91.0
1.1.12.01. Potassium channel KvAP 2a0l Aeropyrum pernix Archaebac. 4 12 29.5 ± 1.1 0 ± 0 -100.0
1.1.12.01. Potassium channel Kv1.2. - Kv2.1. chimera 3lnm Rattus norvegicus Eukaryo. plasma 4 28 31.1 ± 0.9 0 ± 0 -260.7
1.1.12.01. Potassium channel KcsA 1r3j Streptomyces lividans Bact. Gram-pos plas. 4 12 34.8 ± 1.2 0 ± 0 -111.0
1.1.12.01. Potassium channel KcsA, 17A opening conformer 3f7y Streptomyces lividans Bact. Gram-pos plas. 4 8 31.3 ± 1.3 0 ± 0 -82.3
1.1.12.01. Potassium channel Kv1.2. 2a79 Rattus norvegicus Eukaryo. plasma 4 28 29.8 ± 1.5 0 ± 0 -147.0
1.1.12.01. Potassium channel Kv1.2., full-length 3lut Rattus norvegicus Eukaryo. plasma 4 24 25.1 ± 0.5 0 ± 0 -153.1
1.1.12.01. Potassium channel KcsA 1s5h Streptomyces coelicolor Bact. Gram-pos plas. 4 12 33.7 ± 1.3 0 ± 1 -111.9
1.1.12.01. Multi-ligand gated K(+) channel, TrkA, mutant 4gx0 Geobacter sulfurreducens Bact. Gram-neg inner 4 8 31.8 ± 1.3 0 ± 0 -109.5
1.1.12.01. Potassium channel KcsA, 23A opening conformer 3f7v Streptomyces lividans Bact. Gram-pos plas. 4 8 30.1 ± 1.1 0 ± 0 -95.2
1.1.12.02. Potassium channel Kir 2.2 3jyc Gallus gallus Eukaryo. plasma 4 12 30.5 ± 1.4 0 ± 1 -119.9
1.1.12.02. Potassium channel Kirbac3.1, open conformation 3zrs Magnetospirillum magnetotacticum Bact. Gram-neg inner 4 12 30.0 ± 1.1 0 ± 0 -85.9
1.1.12.02. G protein-activated inward rectifier potassium channel 2 (GIRK2, Kir3.2) 3sya Mus musculus Eukaryo. plasma 4 12 34.8 ± 0.7 0 ± 0 -145.5
1.1.12.02. Kir3.1-prokaryotic Kir channel chimera 2qks Burkholderia xenovorans Bact. Gram-neg inner 4 12 30.5 ± 1.4 0 ± 1 -88.6
1.1.12.02. Potassium channel Kir 2.2, complex with pyrophosphate lipid 3spc Gallus gallus Eukaryo. plasma 4 8 30.6 ± 1.2 0 ± 0 -120.3
1.1.12.02. Potassium channel Kirbac1.1, closed state, refined 2wll Burkholderia pseudomallei Bact. Gram-neg inner 4 8 33.4 ± 2.4 0 ± 0 -109.1
1.1.12.02. Potassium channel Kirbac3.1, closed conformation 2wlk Magnetospirillum magnetotacticum Bact. Gram-neg inner 4 8 29.8 ± 2.4 0 ± 0 -78.7
1.1.12.02. Potassium channel Kirbac1.1, closed state 1p7b Burkholderia pseudomallei Bact. Gram-neg inner 4 12 33.1 ± 1.3 0 ± 0 -111.9
1.1.12.02. Potassium channel Kir 2.2, complex with inositol lipid 3spg Gallus gallus Eukaryo. plasma 4 8 30.8 ± 1.2 0 ± 0 -109.1
1.1.12.02. G protein-activated inward rectifier potassium channel 2, diff. conf. 3syq Mus musculus Eukaryo. plasma 4 8 31.6 ± 0.6 0 ± 0 -107.9
1.1.12.03. TrkH/TrkA potassium transport complex 4j9u Vibrio parahaemolyticus Bact. Gram-neg inner 2 20 29.4 ± 0.7 0 ± 0 -151.9
1.1.12.03. TrkH/TrkA potassium transport complex 4j7c Bacillus subtilis Bact. Gram-pos plas. 2 16 31.8 ± 1.0 0 ± 0 -165.6
1.1.12.03. Potassium uptake protein TrkH 3pjz Vibrio parahaemolyticus Bact. Gram-neg inner 2 20 29.7 ± 0.6 1 ± 0 -164.0
1.1.13.01. Acid-sensing ion channel 2qts Gallus gallus Eukaryo. plasma 3 6 36.6 ± 0.9 15 ± 0 -67.8
1.1.13.01. Acid-sensitive ion channel, conformation at low pH 3hgc Gallus gallus Eukaryo. plasma 3 6 24.1 ± 0.7 0 ± 0 -37.9
1.1.13.02. ATP-gated P2X4 ion channel, open state 4dw1 Danio rerio Eukaryo. plasma 3 6 26.8 ± 0.6 0 ± 0 -56.0
1.1.13.02. ATP-gated P2X4 ion channel, closed state 3h9v Danio rerio Eukaryo. plasma 3 6 27.6 ± 1.3 0 ± 1 -61.3
1.1.14.01. Aquaporin Sopip2, closed state 1z98 Spinacia oleracea Eukaryo. plasma 4 32 28.1 ± 2.2 0 ± 0 -117.2
1.1.14.01. Aquaporin Sopip2, closed state 2 3cll Spinacia oleracea Eukaryo. plasma 4 27 29.8 ± 0.7 0 ± 0 -127.8
1.1.14.01. Aquaporin-0 2b6o Ovis aries Eukaryo. plasma 4 32 31.8 ± 1.4 0 ± 0 -143.3
1.1.14.01. Aquaporin Sopip2, open state 2b5f Spinacia oleracea Eukaryo. plasma 4 32 29.4 ± 1.1 2 ± 2 -113.0
1.1.14.01. Aquaporin-0, alternative packing with lipids 3m9i Ovis aries Eukaryo. plasma 4 24 27.6 ± 1.4 0 ± 0 -139.0
1.1.14.01. Aquaporin Z2 3llq Agrobacterium tumefaciens Bact. Gram-neg inner 4 32 29.8 ± 0.6 0 ± 0 -134.5
1.1.14.01. Aquaporin-1 1j4n Bos taurus Eukaryo. plasma 4 32 31.8 ± 1.0 0 ± 0 -129.2
1.1.14.01. Aquaporin-4 3gd8 Homo sapiens Eukaryo. plasma 4 32 29.8 ± 1.1 0 ± 1 -122.9
1.1.14.01. Aquaporin-4, different conformation of loops with lipids 2zz9 Rattus norvegicus Eukaryo. plasma 4 28 29.5 ± 0.7 0 ± 0 -115.6
1.1.14.01. Aquaporin-0 1ymg Bos taurus Eukaryo. plasma 4 32 31.3 ± 1.2 0 ± 0 -138.4
1.1.14.01. Aquaglyceroporin 3c02 Plasmodium falciparum Eukaryo. plasma 4 32 30.4 ± 1.3 0 ± 0 -137.4
1.1.14.01. Aquaporin AqpM 3ne2 Archaeoglobus fulgidus Archaebac. 4 24 31.2 ± 1.3 0 ± 0 -143.5
1.1.14.01. Aquaporin-4 2d57 Rattus norvegicus Eukaryo. plasma 4 32 29.8 ± 1.1 0 ± 0 -126.2
1.1.14.01. Aquaporin Z 1rc2 Escherichia coli Bact. Gram-neg inner 4 32 29.7 ± 1.3 0 ± 0 -118.7
1.1.14.01. Aquaporin-0, open state 2b6p Bos taurus Eukaryo. plasma 4 32 31.1 ± 1.5 0 ± 1 -130.0
1.1.14.01. Glycerol uptake facilitator 1ldf Escherichia coli Bact. Gram-neg inner 4 32 30.1 ± 0.9 0 ± 0 -147.9
1.1.14.01. Aquaporin AqpM 2f2b Methanobacterium thermoautotrophicum Archaebac. 4 32 29.0 ± 0.8 0 ± 0 -129.9
1.1.14.01. Aquaporin AQY1 2w2e Pichia pastoris Eukaryo. plasma 4 32 30.2 ± 0.8 0 ± 0 -131.7
1.1.14.01. Aquaporin-1 1h6i Homo sapiens Eukaryo. plasma 4 32 30.8 ± 1.1 0 ± 0 -135.6
1.1.14.01. Aquaporin-5 3d9s Homo sapiens Eukaryo. plasma 4 32 30.3 ± 0.9 0 ± 0 -133.3
1.1.14.02. Formate transporter 3q7k Salmonella enterica Bact. Gram-neg inner 5 30 28.6 ± 0.0 0 ± 0 -148.8
1.1.14.02. Nitrite transporter NirC 4fc4 Salmonella typhimurium Bact. Gram-neg inner 5 35 33.8 ± 0.0 0 ± 0 -112.5
1.1.14.02. Formate transporter 1, FocA 3kly Vibrio cholerae Bact. Gram-neg inner 5 35 31.4 ± 0.5 1 ± 0 -188.2
1.1.14.02. Formate/nitrite transporter 3tdp Clostridium difficile Bact. Gram-pos plas. 5 30 28.4 ± 1.9 0 ± 0 -161.3
1.1.14.02. Formate transporter 1, FocA 3kcu Escherichia coli Bact. Gram-neg inner 5 35 29.9 ± 0.7 0 ± 0 -160.9
1.1.15.01. Glycine receptor, alpha1 subunit 1vry Homo sapiens Eukaryo. plasma 1 2 23.2 ± 3.7 5 ± 9 -25.3
1.1.15.01. Glutamate-gated chloride channel GluCl alpha 3rhw Caenorhabditis elegans Eukaryo. plasma 5 20 30.2 ± 0.7 0 ± 0 -107.9
1.1.15.01. Nicotinic acetylcholine receptor, alpha4 subunit, in LDAO micelles 2lly Homo sapiens Eukaryo. plasma 1 4 29.2 ± 1.2 8 ± 1 -49.2
1.1.15.01. Nicotinic acetylcholine receptor, closed state 2bg9 Torpedo marmorata Eukaryo. plasma 5 20 30.1 ± 1.1 3 ± 0 -119.6
1.1.15.01. Nicotinic acetylcholine receptor, beta2 subunit, in LDAO micelles 2lm2 Homo sapiens Eukaryo. plasma 1 4 29.2 ± 1.6 14 ± 2 -48.8
1.1.15.01. Nicotinic acetylcholine receptor, partially open state 4aq9 Torpedo marmorata Eukaryo. plasma 5 20 30.8 ± 0.8 2 ± 0 -109.5
1.1.15.01. Nicotinic acetylcholine receptor, beta2 subunit, in hexafluoroisopropanol/water 2ksr Homo sapiens Eukaryo. plasma 1 4 29.1 ± 2.2 16 ± 1 -47.0
1.1.15.02. Proton-gated ion channel, open state 3eam Gloeobacter violaceus Bact. Gram-neg inner 5 20 32.7 ± 0.9 0 ± 1 -183.4
1.1.15.02. Proton-gated ion channel, inactive, complex with acetylcholine 3rqw Erwinia chrysanthemi Bact. Gram-neg inner 5 20 29.8 ± 0.4 0 ± 0 -118.8
1.1.15.02. Proton-gated ion channel, inactive conformation 2vl0 Erwinia chrysanthemi Bact. Gram-neg inner 5 20 31.8 ± 1.3 0 ± 0 -107.6
1.1.15.02. Proton-gated ion channel, locally closed 3tlw Gloeobacter violaceus Bact. Gram-neg inner 5 20 34.0 ± 1.6 0 ± 0 -190.3
1.1.15.02. Proton-gated ion channel, different inactive conformation 3uq7 Erwinia chrysanthemi Bact. Gram-neg inner 5 20 32.0 ± 1.6 0 ± 1 -92.6
1.1.15.02. Proton-gated ion channel, different conformation 4a97 Erwinia chrysanthemi Bact. Gram-neg inner 5 40 31.8 ± 0.5 0 ± 0 -125.8
1.1.16.01. Glutamate receptor 2 3kg2 Rattus norvegicus Eukaryo. plasma 4 16 31.8 ± 2.0 0 ± 0 -93.0
1.1.17.01. Rhesus Glycoprotein RhCG 3hd6 Homo sapiens Eukaryo. plasma 3 36 31.8 ± 0.7 0 ± 0 -174.1
1.1.17.01. Ammonium transporter Amt-1 2b2f Archaeoglobus fulgidus Archaebac. 3 33 28.9 ± 0.7 0 ± 0 -152.5
1.1.17.01. Ammonia Channel 1u7g Escherichia coli Bact. Gram-neg inner 3 33 29.8 ± 1.3 0 ± 0 -148.7
1.1.17.01. Ammonia channel, complex with inhibitory GlnK 2ns1 Escherichia coli Bact. Gram-neg inner 3 33 29.1 ± 0.7 0 ± 0 -148.7
1.1.17.01. Rh-like protein 3b9y Nitrosomonas europaea Bact. Gram-neg inner 3 33 29.8 ± 1.3 0 ± 0 -150.1
1.1.17.02. Urea transporter 1 4ezc Bos taurus Eukaryo. plasma 3 30 31.2 ± 0.6 0 ± 0 -138.8
1.1.17.02. Urea transporter 3k3f Desulfovibrio vulgaris Bact. Gram-neg inner 3 30 29.4 ± 0.8 0 ± 0 -124.4
1.1.18.01. Mechanosensitive channel MscL 2oar Mycobacterium tuberculosis Bact. Gram-pos plas. 5 10 36.1 ± 2.2 0 ± 0 -142.7
1.1.18.01. Mechanosensitive channel MscL 3hzq Staphylococcus aureus Bact. Gram-pos plas. 4 8 20.8 ± 1.2 1 ± 0 -56.9
1.1.19.01. Mechanosensitive channel protein MscS, slightly different conf. 3udc Thermoanaerobacter tengcongensis Bact. Gram-pos plas. 7 7 32.2 ± 0.7 0 ± 0 -121.8
1.1.19.01. Mechanosensitive channel protein MscS, closed state 4hw9 Helicobacter pylori Bact. Gram-neg inner 7 14 31.6 ± 1.8 0 ± 0 -140.9
1.1.19.01. Mechanosensitive channel protein MscS, expanded state 2oau Escherichia coli Bact. Gram-neg inner 7 14 31.8 ± 0.8 1 ± 1 -171.3
1.1.19.01. Mechanosensitive channel protein MscS, open state 2vv5 Escherichia coli Bact. Gram-neg inner 7 21 27.8 ± 1.9 0 ± 0 -138.7
1.1.19.01. Mechanosensitive channel protein MscS 3t9n Thermoanaerobacter tengcongensis Bact. Gram-pos plas. 7 7 28.0 ± 0.7 0 ± 0 -131.5
1.1.20.01. Connexin 26 gap junction channel (beta-2 protein) 2zw3 Spodoptera frugiperda Eukaryo. plasma 6 24 32.2 ± 0.5 0 ± 0 -155.9
1.1.21.01. Magnesium transport protein CorA 4ev6 Methanococcus jannaschii Archaebac. 5 10 28.4 ± 1.5 0 ± 1 -92.4
1.1.21.01. CorA magnesium transporter, conformation 2 4eeb Thermotoga maritima Bact. Gram-neg inner 5 10 30.0 ± 1.0 1 ± 1 -81.6
1.1.21.01. CorA magnesium transporter, conformation 1 2bbj Thermotoga maritima Bact. Gram-neg inner 5 10 29.9 ± 1.0 0 ± 0 -80.8
1.1.21.01. CorA magnesium transporter, conformation 3 2iub Thermotoga maritima Bact. Gram-neg inner 5 10 28.0 ± 1.2 0 ± 0 -65.7
1.1.21.01. CorA magnesium transporter, complete loops 4i0u Thermotoga maritima Bact. Gram-neg inner 5 10 30.4 ± 1.1 0 ± 0 -83.4
1.1.22.01. Pore-forming haemolysin E (HlyE) 2wcd Escherichia coli Secreted 12 36 30.8 ± 0.7 0 ± 0 -148.3
1.1.25.01. Glycerol-3-Phosphate Transporter 1pw4 Escherichia coli Bact. Gram-neg inner 1 12 31.2 ± 1.4 1 ± 7 -92.5
1.1.25.02. Lactose permease, conformation 1 2cfq Escherichia coli Bact. Gram-neg inner 1 12 31.9 ± 1.1 5 ± 1 -87.9
1.1.25.02. Lactose permease, conformation 3 1pv6 Escherichia coli Bact. Gram-neg inner 1 12 31.8 ± 1.2 5 ± 0 -89.1
1.1.25.02. Lactose permease, conformation 2 2v8n Escherichia coli Bact. Gram-neg inner 1 12 31.8 ± 0.8 5 ± 0 -86.4
1.1.25.02. Lactose permease, conformation 4 2y5y Escherichia coli Bact. Gram-neg inner 1 12 31.8 ± 1.3 4 ± 1 -89.0
1.1.25.02. Lactose Permease, structure at acidic pH 2cfp Escherichia coli Bact. Gram-neg inner 1 12 31.1 ± 1.4 2 ± 2 -85.4
1.1.25.03. Multidrug transporter EmrD 2gfp Escherichia coli Bact. Gram-neg inner 1 12 31.6 ± 1.5 9 ± 0 -58.0
1.1.25.04. L-fucose-proton symporter 3o7q Escherichia coli Bact. Gram-neg inner 1 12 30.7 ± 1.3 6 ± 0 -85.3
1.1.25.05. Bacterial oligopeptide-proton symporter 2xut Shewanella oneidensis Bact. Gram-neg inner 1 14 30.9 ± 1.4 10 ± 0 -102.5
1.1.25.06. D-xylose-proton symporter, conformation 2 4ja3 Escherichia coli Bact. Gram-neg inner 1 12 29.8 ± 1.0 4 ± 1 -87.6
1.1.25.06. D-xylose-proton symporter, conformation 3 4ja4 Escherichia coli Bact. Gram-neg inner 1 12 28.2 ± 1.3 0 ± 0 -82.8
1.1.25.06. Phosphate transporter 4j05 Acanthamoeba culbertsoni Eukaryo. plasma 1 12 30.0 ± 0.5 14 ± 0 -84.2
1.1.25.06. D-xylose-proton symporter, conformation 1 4gc0 Escherichia coli Bact. Gram-neg inner 1 12 30.2 ± 0.9 1 ± 0 -90.2
1.1.25.07. Nitrite exporter 4iu9 Escherichia coli Bact. Gram-neg inner 1 12 31.0 ± 1.2 4 ± 0 -88.1
1.1.26.01. Leucine transporter LeuT, outward-facing substrate-free conformation 3tt1 Aquifex aeolicus Bact. Gram-neg inner 2 24 28.2 ± 1.2 0 ± 0 -160.8
1.1.26.01. Leucine transporter LeuT, outward-facing substrate-bound conformation 2a65 Aquifex aeolicus Bact. Gram-neg inner 2 28 29.8 ± 0.5 0 ± 0 -157.9
1.1.26.01. Leucine transporter LeuT, outward-facing conformation, from bicelles 4fxz Aquifex aeolicus Bact. Gram-neg inner 2 24 28.0 ± 0.6 0 ± 0 -144.3
1.1.26.01. Leucine transporter LeuT, inward-facing conformation 3tt3 Aquifex aeolicus Bact. Gram-neg inner 1 12 27.4 ± 1.6 9 ± 0 -89.1
1.1.26.02. Sodium-hydantoin transporter Mhp1, ligand-bound 2jlo Mycobacterium liquefaciens Bact. Gram-pos plas. 1 12 31.2 ± 0.8 15 ± 0 -96.5
1.1.26.02. Sodium-hydantoin transporter Mhp1, inward-facing conformation 2x79 Mycobacterium liquefaciens Bact. Gram-pos plas. 1 12 30.7 ± 1.1 13 ± 0 -85.0
1.1.26.02. Sodium-hydantoin transporter Mhp1, outward-facing conformation 2jln Mycobacterium liquefaciens Bact. Gram-pos plas. 1 12 29.8 ± 1.5 16 ± 0 -98.9
1.1.26.03. Sodium/sugar symporter vSGLT, substrate-free 2xq2 Vibrio parahaemolyticus Bact. Gram-neg inner 2 30 30.4 ± 0.6 0 ± 0 -162.7
1.1.26.03. Sodium/sugar symporter vSGLT, substrate-bound 3dh4 Vibrio parahaemolyticus Bact. Gram-neg inner 2 30 30.0 ± 0.7 0 ± 0 -184.0
1.1.26.04. Glycine betaine transporter BetP, asymmetric trimer, conformation 1 4ain Corynebacterium glutamicum Bact. Gram-pos plas. 3 36 29.8 ± 0.6 0 ± 0 -198.8
1.1.26.04. Glycine betaine transporter BetP, substrate-bound 2wit Corynebacterium glutamicum Bact. Gram-pos plas. 3 36 30.4 ± 1.2 0 ± 0 -198.6
1.1.26.04. Glycine betaine transporter BetP, alternative inward-facing open conformation 3p03 Corynebacterium glutamicum Bact. Gram-pos plas. 3 36 29.8 ± 0.7 1 ± 0 -160.9
1.1.26.04. L-carnitine/gamma-butyrobetaine antiporter CaiT, open inward-facing conformation 2wsx Escherichia coli Bact. Gram-neg inner 3 42 28.6 ± 0.7 7 ± 0 -212.7
1.1.26.04. Glycine betaine transporter BetP, asymmetric trimer, conformation 2 4doj Corynebacterium glutamicum Bact. Gram-pos plas. 3 36 30.0 ± 0.6 0 ± 0 -186.4
1.1.26.04. L-carnitine/gamma-butyrobetaine antiporter CaiT, substrate-bound 3hfx Escherichia coli Bact. Gram-neg inner 3 42 29.8 ± 0.8 0 ± 0 -203.5
1.1.26.04. L-carnitine/gamma-butyrobetaine antiporter CaiT, open inward-facing conformation 2wsw Proteus mirabilis Bact. Gram-neg inner 3 42 29.8 ± 0.5 0 ± 0 -218.9
1.1.26.05. Glutamate/gamma-aminobutyrate antiporter 4dji Escherichia coli Bact. Gram-neg inner 1 12 30.0 ± 1.1 10 ± 1 -98.9
1.1.26.05. Arginine/agmatine antiporter (AdiC), outward-facing conformation 3h5m Escherichia coli Bact. Gram-neg inner 2 26 29.0 ± 0.8 0 ± 0 -128.9
1.1.26.05. Amino acid transporter ApcT, inward-facing conformation 3gia Methanococcus jannaschii Archaebac. 1 12 29.9 ± 1.4 11 ± 2 -92.1
1.1.26.05. Arginine/agmatine transporter (AdiC), intermediate conformation 3ob6 Escherichia coli Bact. Gram-neg inner 2 24 29.8 ± 1.4 3 ± 1 -158.7
1.1.26.05. Arginine/agmatine antiporter (AdiC), outward-facing conformation 3hqk Salmonella enterica Bact. Gram-neg inner 2 26 29.8 ± 1.0 0 ± 0 -124.6
1.1.26.05. Arginine/agmatine transporter (AdiC), substrate-bound 3l1l Escherichia coli Bact. Gram-neg inner 2 24 28.8 ± 1.4 2 ± 2 -132.0
1.1.26.06. Uracil transporter UraA 3qe7 Escherichia coli Bact. Gram-neg inner 1 14 27.7 ± 1.2 16 ± 0 -79.3
1.1.27.01. Ferrous-iron efflux pump fieF 3h90 Escherichia coli Bact. Gram-neg inner 2 12 29.6 ± 0.8 0 ± 2 -83.9
1.1.27.01. Zinc transporter YiiP, inward-facing conformation 3j1z Shewanella oneidensis Bact. Gram-neg inner 2 12 28.6 ± 1.2 8 ± 1 -54.4
1.1.27.01. Ferrous-iron efflux pump fieF, different conformation 2qfi Escherichia coli Bact. Gram-neg inner 2 12 25.0 ± 1.3 1 ± 2 -32.4
1.1.28.01. Multidrug exporter MexB 2v50 Pseudomonas aeruginosa Bact. Gram-neg inner 3 36 28.6 ± 1.0 0 ± 1 -167.3
1.1.28.01. Multidrug efflux transporter AcrB, symmetric 3d9b Escherichia coli Bact. Gram-neg inner 3 36 28.4 ± 0.6 0 ± 0 -189.9
1.1.28.01. Multidrug efflux transporter AcrB, asymmetric, complex with ankyrin repeat 2 3nog Escherichia coli Bact. Gram-neg inner 3 36 29.0 ± 0.5 3 ± 0 -202.9
1.1.28.01. Multidrug efflux transporter AcrB, asymmetric 2gif Escherichia coli Bact. Gram-neg inner 3 36 29.0 ± 0.2 1 ± 0 -187.5
1.1.28.01. Multidrug efflux transporter AcrB with YajC subunit , symmetric 2rdd Escherichia coli Bact. Gram-neg inner 6 39 28.4 ± 0.5 0 ± 0 -156.2
1.1.28.01. Multidrug efflux transporter AcrB, asymmetric, complex with ankyrin repeat 1 4dx5 Escherichia coli Bact. Gram-neg inner 3 36 27.4 ± 0.7 1 ± 0 -181.0
1.1.28.02. Efflux transporter CusA, complex with CusB 3ne5 Escherichia coli Bact. Gram-neg inner 3 36 29.0 ± 0.7 0 ± 0 -165.0
1.1.28.02. Efflux transporter CusA, apo-protein 3k07 Escherichia coli Bact. Gram-neg inner 3 33 27.4 ± 1.2 0 ± 0 -166.7
1.1.28.02. Efflux transporter CusA, Cu(i) complex 3kss Escherichia coli Bact. Gram-neg inner 3 33 28.8 ± 0.5 0 ± 0 -147.7
1.1.28.02. Efflux transporter CusA, complex with CusB, pre-extrusion state 3t56 Escherichia coli Bact. Gram-neg inner 3 36 30.4 ± 0.6 0 ± 0 -153.7
1.1.28.03. SecDF protein-export membrane protein 3aqp Thermus thermophilus Bact. Gram-neg inner 1 12 29.8 ± 0.9 5 ± 1 -93.8
1.1.30.01. Membrane protein insertase YidC, periplasmic domain 3blc Escherichia coli Bact. Gram-neg inner 1 0 6.6 ± 0.5 40 ± 11 -7.0
1.1.31.01. Tellurite resistance protein tehA homolog 3m73 Haemophilus influenzae Bact. Gram-neg inner 3 30 29.1 ± 1.4 0 ± 0 -157.4
1.1.32.01. Proton glutamate symport protein, outward-facing state 2nwl Pyrococcus horikoshii Archaebac. 3 39 29.8 ± 1.3 0 ± 0 -202.1
1.1.32.01. Proton glutamate symport protein, inward-facing state 3kbc Pyrococcus horikoshii Archaebac. 3 30 28.1 ± 0.9 0 ± 1 -158.8
1.1.32.01. Proton glutamate symport protein, outward-facing state 2 2nww Pyrococcus horikoshii Archaebac. 3 36 30.6 ± 0.6 0 ± 0 -200.2
1.1.32.01. Proton glutamate symport protein, mixed inward/outward trimer 3v8g Pyrococcus horikoshii Archaebac. 3 30 29.8 ± 1.0 5 ± 0 -169.4
1.1.33.02. Bile acid sodium symporter ASBT 3zuy Neisseria meningitidis Bact. Gram-neg inner 1 10 29.8 ± 1.5 15 ± 2 -82.3
1.1.34.01. Mitochondrial ADP-ATP carrier, with carboxyatractyloside 2c3e Bos taurus Mitochon. inner 1 6 30.0 ± 1.0 4 ± 2 -44.0
1.1.34.01. Mitochondrial uncoupling protein 2 2lck Mus musculus Mitochon. inner 1 6 30.0 ± 1.2 12 ± 1 -30.3
1.1.34.01. Mitochondrial ADP-ATP carrier 1okc Bos taurus Mitochon. inner 1 6 29.5 ± 1.7 14 ± 1 -44.6
1.1.35.01. Sodium/proton antiporter 1 (NhaA), dimer 3fi1 Escherichia coli Bact. Gram-neg inner 2 24 28.4 ± 1.6 2 ± 1 -126.7
1.1.35.01. Sodium/proton antiporter 1 (NhaA) 1zcd Escherichia coli Bact. Gram-neg inner 1 14 28.4 ± 1.4 2 ± 2 -78.6
1.1.36.01. ClC chloride transporter 1ots Escherichia coli Bact. Gram-neg inner 2 28 29.7 ± 0.8 0 ± 0 -115.3
1.1.36.01. ClC chloride transporter 3nd0 Synechocystis sp. Bact. Gram-neg inner 2 28 29.8 ± 0.7 0 ± 1 -120.9
1.1.36.01. ClC chloride transporter 1kpl Salmonella enterica Bact. Gram-neg inner 2 28 29.3 ± 0.8 2 ± 1 -128.0
1.1.36.01. ClC chloride transporter 3org Cyanidoschyzon merolae Eukaryo. plasma 2 28 28.7 ± 1.3 0 ± 2 -140.4
1.1.38.01. Na+/drug antiporter NorM, outward-open 3mkt Vibrio cholerae Bact. Gram-neg inner 1 12 29.8 ± 1.1 9 ± 0 -74.0
1.1.38.01. H+-driven MATE exporter, outward-open, straight conformation 3vvq Pyrococcus furiosus Archaebac. 1 12 31.8 ± 1.3 8 ± 0 -87.2
1.1.38.01. Na+/drug antiporter NorM, outward-open 4hum Neisseria gonorrhoeae Bact. Gram-neg inner 1 12 28.6 ± 1.1 5 ± 1 -54.5
1.1.38.01. H+-driven MATE exporter, outward-open, "bent" conformation 3vvo Pyrococcus furiosus Archaebac. 1 12 31.4 ± 1.1 11 ± 0 -93.1
1.1.38.01. H+-driven MATE exporter, outward-open, with nonpeptide inhibitor 3vvp Pyrococcus furiosus Archaebac. 1 12 29.8 ± 1.3 8 ± 0 -79.6
1.1.39.01. Riboflavin transporter RibU 3p5n Staphylococcus aureus Bact. Gram-pos plas. 1 6 30.6 ± 1.4 6 ± 4 -53.5
1.1.39.02. Thiamine transporter protein 3rlb Lactococcus lactis Bact. Gram-pos plas. 1 6 30.8 ± 1.8 9 ± 1 -60.4
1.1.39.02. Biotin transporter BioY 4dve Lactococcus lactis Bact. Gram-pos plas. 1 6 31.8 ± 1.2 13 ± 1 -71.7
1.1.39.03. Energy-coupling factor transporter EcfA, conformation 1 4hzu Lactobacillus brevis Bact. Gram-pos plas. 2 7 29.7 ± 1.6 13 ± 1 -64.8
1.1.39.03. Energy-coupling factor transporter EcfA, conformation 2 4huq Bacillus brevis Bact. Gram-pos plas. 7 7 29.8 ± 0.7 14 ± 0 -76.0
1.1.41.01. Magnesium ion transporter-E (MgtE) 2yvx Thermus thermophilus Bact. Gram-neg inner 2 10 31.1 ± 0.9 0 ± 0 -69.2
1.1.43.01. Saccharide transporter component, EIIC (ChbC) 3qnq Bacillus cereus Bact. Gram-pos plas. 2 20 29.6 ± 1.0 1 ± 0 -140.6
1.1.44.01. Disulfide bond formation protein B, conformation 3 2zuq Escherichia coli Bact. Gram-neg inner 1 4 27.9 ± 3.1 27 ± 1 -36.6
1.1.44.01. DsbB - DsbA complex, conformation 1 2hi7 Escherichia coli Bact. Gram-neg inner 1 4 24.3 ± 3.0 30 ± 0 -34.9
1.1.44.01. Disulfide bond formation protein B, conformation 1 2k74 Escherichia coli Bact. Gram-neg inner 1 4 29.7 ± 2.4 26 ± 1 -50.2
1.1.44.01. DsbB-DsbA complex, conformation 3 2leg Escherichia coli Bact. Gram-neg inner 1 4 30.6 ± 1.7 34 ± 2 -36.3
1.1.44.01. Disulfide bond formation protein B, conformation 2 2ltq Escherichia coli Bact. Gram-neg inner 1 4 28.4 ± 1.5 26 ± 0 -36.5
1.1.44.01. DsbB - DsbA complex, conformation 4 3e9j Escherichia coli Bact. Gram-neg inner 1 4 26.8 ± 1.5 31 ± 1 -27.1
1.1.44.01. DsbB - DsbA complex, conformation 2 2zup Escherichia coli Bact. Gram-neg inner 1 4 24.2 ± 2.9 3 ± 8 -18.3
1.1.46.01. MerF bacterial mercury uptake transporter 2lj2 Morganella morganii Bact. Gram-neg inner 1 2 28.8 ± 2.4 19 ± 1 -37.9
1.1.47.01. Sensor protein kdpD 2ksf Escherichia coli Bact. Gram-neg inner 1 4 26.2 ± 4.0 45 ± 1 -27.9
1.1.47.01. Aerobic respiration control sensor protein acrB 2ksd Escherichia coli Bact. Gram-neg inner 1 2 27.9 ± 2.8 9 ± 1 -33.6
1.1.47.01. Sensor protein qseC 2kse Escherichia coli Bact. Gram-neg inner 1 2 31.3 ± 2.5 19 ± 0 -35.7
1.1.48.01. Putative sulfate permease CysZ 3tx3 Idiomarina loihiensis Bact. Gram-neg inner 1 6 29.8 ± 0.6 17 ± 4 -49.5
1.1.49.01. ATP-dependent zinc metalloprotease FtsH 3kds Thermotoga maritima Bact. Gram-neg inner 6 0 2.2 ± 0.4 90 ± 0 -12.8
1.1.49.01. ATP-dependent zinc metalloprotease FtsH 1lv7 Escherichia coli Bact. Gram-neg inner 1 0 2.1 ± 1.0 80 ± 11 -4.3
1.1.50.01. Particulate methane monooxygenase 3rfr Methylocystis sp. Bact. Gram-neg inner 10 39 29.8 ± 0.5 0 ± 0 -198.1
1.1.50.01. Particulate methane monooxygenase 1yew Methylococcus capsulatus Bact. Gram-neg inner 9 42 28.2 ± 0.7 0 ± 0 -188.5
1.1.50.01. Particulate methane monooxygenase 3chx Methylosinus trichosporium Bact. Gram-neg inner 10 30 29.8 ± 0.4 0 ± 0 -152.0
1.1.50.01. Particulate methane monooxygenase, different structure 3rgb Methylococcus capsulatus Bact. Gram-neg inner 9 39 28.2 ± 0.6 0 ± 0 -204.9
1.1.51.01. Vitamin K epoxide reductase 3kp9 Synechococcus sp. Bact. Gram-neg inner 1 5 29.8 ± 1.6 0 ± 0 -45.1
1.1.52.01. Oligosaccharyltransferase PglB 3rce Campylobacter lari Bact. Gram-neg inner 1 13 28.8 ± 0.9 8 ± 0 -89.6
1.1.53.01. Integral Membrane Methyltransferase 4a2n Methanosarcina acetivorans Archaebac. 1 5 30.6 ± 1.2 10 ± 2 -58.3
1.1.54.01. Diacylglycerol kinase (DAGK) 2kdc Escherichia coli Bact. Gram-neg inner 3 9 25.5 ± 1.8 0 ± 0 -39.9
1.1.55.01. Bacterial polysaccharide co-polymerase FepE 3b8n Escherichia coli Bact. Gram-neg inner 9 0 1.6 ± 0.1 1 ± 0 -20.3
1.1.56.01. Steryl-sulfatase 1p49 Homo sapiens Endoplasm. reticulum 1 2 29.6 ± 1.1 23 ± 0 -34.6
1.1.56.01. Glycerol phosphate lipoteichoic acid synthase 2 2w8d Bacillus subtilis Bact. Gram-pos plas. 1 0 0.0 ± 6.0 83 ± 58 -1.6
1.1.56.01. Glycerol phosphate lipoteichoic acid synthase 2w5q Staphylococcus aureus Bact. Gram-pos plas. 1 0 0.4 ± 3.6 82 ± 11 -2.5
1.1.57.01. Peptidase A24B, FlaK domain protein 3s0x Methanococcus maripaludis Archaebac. 1 6 31.8 ± 1.6 40 ± 2 -67.7
1.1.57.02. Intramembrane aspartate protease 4hyg Methanoculleus marisnigri Archaebac. 3 27 31.8 ± 0.3 0 ± 0 -172.7
1.1.58.01. Site-2 protease (S2P) metalloprotease 3b4r Methanococcus jannaschii Archaebac. 1 6 29.9 ± 1.4 23 ± 0 -65.0
1.1.59.01. ATP-dependent Clp protease proteolytic subunit 1 2cby Mycobacterium tuberculosis Bact. Gram-pos plas. 7 0 3.2 ± 0.0 89 ± 0 -17.0
1.1.59.01. Membrane protease specific for a stomatin homolog, monomer 3bpp Pyrococcus horikoshii Archaebac. 1 0 4.0 ± 0.4 82 ± 5 -6.3
1.1.59.01. Membrane protease specific for a stomatin homolog, dimer 3viv Pyrococcus horikoshii Archaebac. 2 0 4.5 ± 0.4 88 ± 9 -9.5
1.1.60.01. Protease GlpG, complex with inhibitor, conformation 3 3ubb Escherichia coli Bact. Gram-neg inner 1 6 29.8 ± 1.3 21 ± 1 -65.3
1.1.60.01. Protease GlpG 2nr9 Haemophilus influenzae Bact. Gram-neg inner 1 6 28.2 ± 1.6 13 ± 3 -52.0
1.1.60.01. Protease GlpG, conformation 2 2nrf Escherichia coli Bact. Gram-neg inner 1 6 27.6 ± 1.5 13 ± 2 -45.9
1.1.60.01. Protease GlpG, conformation 3 2irv Escherichia coli Bact. Gram-neg inner 1 6 28.2 ± 1.3 23 ± 5 -48.1
1.1.60.01. Protease GlpG, crystallographic trimer 4h1d Escherichia coli Bact. Gram-neg inner 3 18 27.0 ± 0.1 2 ± 0 -108.7
1.1.60.01. Protease GlpG, conformation 1 2xtv Escherichia coli Bact. Gram-neg inner 1 6 28.8 ± 1.6 14 ± 1 -61.1
1.1.60.01. Protease GlpG, complex with inhibitor, conformation 2 3zeb Escherichia coli Bact. Gram-neg inner 1 6 28.4 ± 1.3 12 ± 0 -64.0
1.1.60.01. Protease GlpG, complex with inhibitor, conformation 1 2xow Escherichia coli Bact. Gram-neg inner 1 6 29.0 ± 1.7 15 ± 2 -59.0
1.1.61.01. Leukotriene C4 synthase 2uuh Homo sapiens Endoplasm. reticulum 3 12 29.4 ± 1.1 0 ± 0 -55.2
1.1.61.01. Microsomal prostaglandin E synthase 1, different conformation 4al0 Homo sapiens Eukaryo. plasma 3 12 28.8 ± 1.0 0 ± 1 -79.7
1.1.61.01. Microsomal glutathione S-transferase 1 2h8a Rattus norvegicus Endoplasm. reticulum 3 12 29.7 ± 0.7 0 ± 1 -47.7
1.1.61.01. FLAP protein (5-lipoxygenase activator) 2q7r Homo sapiens Endoplasm. reticulum 3 12 30.3 ± 1.3 0 ± 1 -70.8
1.1.61.01. Microsomal prostaglandin E synthase 1 3dww Homo sapiens Endoplasm. reticulum 3 12 31.9 ± 1.1 2 ± 1 -97.3
1.1.62.01. Diguanylate cyclase/phosphodiesterase 3pjv Pseudomonas fluorescens Bact. Gram-neg inner 5 0 4.6 ± 1.5 79 ± 4 -6.6
1.1.63.01. Type 1 signal peptidase, complex with lipopeptide inhibitor 1t7d Escherichia coli Bact. Gram-neg inner 1 0 3.9 ± 1.0 65 ± 11 -7.6
1.1.63.01. Type 1 signal peptidase, complex with inhibitor 1b12 Escherichia coli Bact. Gram-neg inner 1 0 5.4 ± 1.8 88 ± 7 -5.1
1.1.63.01. Type 1 signal peptidase, apo-enzyme 1kn9 Escherichia coli Bact. Gram-neg inner 1 0 3.4 ± 1.4 80 ± 6 -7.8
1.1.63.01. Signal peptidase I 3iiq Escherichia coli Bact. Gram-neg inner 2 0 4.3 ± 0.5 57 ± 2 -10.2
1.1.64.01. Sodium/calcium exchanger 3v5u Methanococcus jannaschii Archaebac. 1 10 29.8 ± 0.9 3 ± 0 -78.4
1.1.64.01. Sodium/calcium exchanger, different conformation 3v5s Methanococcus jannaschii Archaebac. 1 10 29.6 ± 1.6 1 ± 2 -75.1
1.1.65.01. Concentrative nucleoside transporter 3tij Vibrio cholerae Bact. Gram-neg inner 3 27 27.0 ± 0.5 0 ± 0 -155.2
1.1.66.01. Proton-translocating pyrophosphatase 4a01 Vigna radiata (Mung bean) Vacuole 2 32 32.0 ± 0.8 0 ± 0 -189.3
1.1.66.01. K(+)-stimulated pyrophosphate-energized sodium pump, state1 4av3 Thermotoga maritima Bact. Gram-neg inner 2 32 29.8 ± 0.7 0 ± 0 -182.5
1.1.66.01. K(+)-stimulated pyrophosphate-energized sodium pump, state2 4av6 Thermotoga maritima Bact. Gram-neg inner 2 32 29.8 ± 0.8 0 ± 0 -173.1
1.1.67.01. Transmembrane protein 14C 2los Homo sapiens Mitochon. inner 1 3 26.8 ± 0.4 0 ± 2 -18.5
1.1.67.01. Transmembrane proteins 14A 2lop Homo sapiens Mitochon. inner 1 3 28.8 ± 2.0 23 ± 1 -35.5
1.1.68.01. Transmembrane protein 141 2lor Homo sapiens Undefined 1 2 24.4 ± 4.0 21 ± 0 -22.2
1.1.69.01. HIG1 domain family member 1A 2lom Homo sapiens Eukaryo. plasma 1 2 22.0 ± 5.0 1 ± 1 -27.3
1.1.69.01. HIG1 domain family member 1B 2lon Homo sapiens Eukaryo. plasma 1 2 22.4 ± 1.2 19 ± 0 -13.7
1.1.70.01. CAAX prenyl protease 1 homolog 4aw6 Homo sapiens Endoplasm. reticulum 1 7 30.8 ± 1.3 13 ± 1 -75.9
1.1.70.01. CaaX Protease Ste24p 4il3 Saccharomyces mikatae Endoplasm. reticulum 1 7 29.8 ± 1.4 8 ± 0 -63.3
1.1.71.01. SidF, inhibitor of growth family, member 3 4fyg Legionella pneumophila Vacuole 1 0 8.1 ± 3.3 81 ± 10 -3.9
1.1.72.01. Dicarboxylate/sodium symporter NadC 4f35 Vibrio cholerae Bact. Gram-neg inner 2 28 27.8 ± 0.2 1 ± 0 -82.5
1.1.73.01. Outer membrane complex of type IV secretion system (VirB7/VirB9/VirB10 complex) 3jqo Escherichia coli Bact. Gram-neg outer 14 14 22.6 ± 0.6 0 ± 0 -67.4
1.1.73.01. TrbI protein 2bhv Helicobacter pylori Bact. Gram-neg outer 1 0 3.1 ± 1.3 42 ± 11 -6.4
1.1.74.01. Calcium release-activated calcium channel protein 1 4hkr Drosophila melanogaster Eukaryo. plasma 6 24 30.0 ± 1.6 0 ± 0 -105.2
1.1.75.01. Sec-independent protein translocase TatC 4b4a Aquifex aeolicus Bact. Gram-neg inner 1 6 30.4 ± 1.2 17 ± 0 -51.7
1.1.75.02. Sec-independent protein translocase TatA 2l16 Bacillus subtilis Bact. Gram-pos plas. 1 1 27.6 ± 2.9 10 ± 1 -27.9
1.1.75.02. Sec-independent protein translocase TatA 2lzr Escherichia coli Bact. Gram-neg inner 1 1 29.2 ± 1.8 26 ± 2 -29.1
1.1.75.02. Sec-independent protein translocase TatA, nonamer model 2lzs Escherichia coli Bact. Gram-neg inner 9 9 29.2 ± 1.8 26 ± 2 -29.1
1.1.76.01. Acid-activated urea channel 3ux4 Helicobacter pylori Bact. Gram-neg inner 6 36 30.0 ± 0.5 0 ± 0 -190.2
1.1.77.01. Cellulose-conducting channel 4hg6 Rhodobacter sphaeroides Bact. Gram-neg inner 2 9 30.0 ± 1.3 17 ± 0 -85.0
1.1.78.01. Reticulon-4 2ko2 Mus musculus Endoplasm. reticulum 1 0 2.5 ± 0.3 83 ± 1 -6.2