1m0l » Bacteriorhodopsin
- Type: Transmembrane (3 classes)
- Class: Alpha-helical polytopic (156 superfamilies)
- Superfamily: Rhodopsin-like receptors and pumps (12 families) CL0192
- Family: Microbial and algal rhodopsins (85 proteins) 3.E.1 (TCDB) PF01036 IPR001425 PDBsum
- Species: Halobacterium salinarum (8 proteins)
- Localization: Archaebacterial membrane (179 proteins)
| 1m0l >> Bacteriorhodopsin | |
|---|---|
| Hydrophobic Thickness or Depth | 31.8 Å |
| Tilt Angle | 0° |
| ΔGtransfer | -121.1 kcal/mol |
| Links to 1m0l | PDB Sum, PDB, MSD, MMDB, Encompass |
| Topology | subunit A (N terminus extracellular side) |
| Resolution | 1.47 |
| Primary PDB represention | 1m0l |
| Other PDB entries representing this structure | 1at9 (3.0 EC), 1bm1 (3.5), 1brd (3.5 EC), 1brr (2.9), 1brx (2.3), 1c3w (1.55), 1c8r (1.8), 1c8s (2.0), 1cwq (2.25), 1dze (2.5), 1e0p (2.1), 1f4z (1.8), 1f50 (1.7), 1fbb (3.2 EC), 1iw9 (2.5), 1ixf (2.6), 1kg8 (2.0), 1kg9 (1.81), 1kgb (1.65), 1m0k (1.43), 1m0m (1.43), 1mgy (2.0), 1o0a (1.62), 1p8h (1.52), 1p8i (1.86), 1p8u (1.62), 1qhj (1.9), 1qko (2.1), 1qkp (2.1), 1qm8 (2.5), 1ucq (2.4), 1vjm (2.3), 1x0i (2.3), 1x0k (2.6), 1x0s (2.5), 2at9 (3.0 EC), 2brd (3.5 EC), 2i1x (2.0), 2i20 (2.08), 2i21 (1.84), 2ntu (1.53), 2ntw (1.53), 2wjk (2.3), 2wjl (2.15), 2zfe (2.5), 3mbv (2.0), 3ns0 (1.78), 3nsb (1.78), 3t45 (3.01), 3vhz (2.3), 3vi0 (2.3), 4fpd (2.65), 4md1 (1.73), 4md2 (1.73), 4ov0 (2.0), 4x31 (2.4), 4x32 (1.9), 4xxj (1.9), 5a44 (2.29), 5a45 (2.57), 5b6v (2.0), 5b6w (2.1), 5b6x (2.1), 5b6y (2.1), 5b6z (2.1), 5br2 (1.8), 5br5 (2.0), 5h2h (2.1), 5h2i (2.1), 5h2j (2.1), 5h2k (2.1), 5h2l (2.1), 5h2m (2.1), 5h2n (2.1), 5h2n (2.1), 5h2o (2.1), 5h2p (2.1), 5j7a (2.3), 5zil (1.29), 5zim (1.25), 5zin (1.27), 6g7h (1.5), 6g7i (1.9), 6g7j (1.9), 6g7k (1.9), 6g7l (1.9), 6ga1 (1.7), 6ga2 (1.8), 6ga3 (2.1), 6ga4 (1.8), 6ga5 (1.9), 6ga6 (1.8), 6ga6 (1.8), 6ga7 (1.8), 6ga8 (1.8), 6ga9 (1.8), 6gaa (1.8), 6gab (1.8), 6gac (1.8), 6gad (1.8), 6gae (1.8), 6gaf (1.8), 6gag (1.8), 6gah (1.8), 6gai (1.8), 6rmk (1.8), 6rnj (2.6), 6rph (2.6), 6rqo (2.0), 6rqp (1.8), 7xjc (1.33), 7xjd (1.33), 7xje (1.33) |
| Number of TM secondary structures | 21 |
| Membranome |  |
| Uniprot | BACR_HALSA |
| Verification: Bacteriorhodopsin | |
|---|---|
| Results are consistent with solid state NMR studies of bacteriorhodopsin (Kamihira et al. 2005). Also, see comments for monomeric bacteriorhodopsin, 1py6. |
| Subunits: 3 | |||
|---|---|---|---|
| A - Tilt: 5 - TM segments: 1(9-31),2(43-62),3(80-98),4(108-127),5(132-154),6(173-191),7(201-224) | view assembly page | ||
| B - Tilt: 5 - TM segments: 1(9-31),2(43-62),3(80-98),4(108-127),5(132-154),6(173-191),7(201-224) | |||
| C - Tilt: 5 - TM segments: 1(9-31),2(43-62),3(80-98),4(108-127),5(132-154),6(173-191),7(201-224) | |||
| References: 1 | |
|---|---|
| Kamihira M, Vosegaard T, Mason AJ, Straus SK, Nielsen NC, and Watts A (2005) Structural and orientational constraints of bacteriorhodopsin in purple membranes determined by oriented-sample solid-state NMR spectroscopy. J. Struct. Biol. 149: 7-16. PubMed |