3j9p » Transient receptor potential cation channel A1, TRPA1, structure 4
- Type: Transmembrane (3 classes)
- Class: Alpha-helical polytopic (156 superfamilies)
- Superfamily: Ion channel (VIC) superfamily (24 families) CL0030
- Family: Transient receptor potential channels (254 proteins) 1.A.4 (TCDB) PF06011 IPR010308 PDBsum
- Species: Homo sapiens (2659 proteins)
- Localization: Eukaryotic plasma membrane (3316 proteins)
| 3j9p >> Transient receptor potential cation channel A1, TRPA1, structure 4 | |
|---|---|
| Hydrophobic Thickness or Depth | 26.8 Å |
| Tilt Angle | 0° |
| ΔGtransfer | -121.0 kcal/mol |
| Links to 3j9p | PDB Sum, PDB, MSD, MMDB, Encompass |
| Topology | subunit D (N terminus cytoplasmic side) |
| Resolution | 4.24 EM |
| Primary PDB represention | 3j9p |
| Other PDB entries representing this structure | none |
| Number of TM secondary structures | 24 |
| Membranome |  |
| Uniprot | MALE_ECOLI, TRPA1_HUMAN |
Comments: The hydrophobic thickness is probably underestimated because membrane-interacting loops at the cytoplasmic side are disordered.
| Subunits: 4 | |||
|---|---|---|---|
| A - Tilt: 10 - TM segments: 1( 720- 739), 2( 767- 785), 3( 807- 823), 4( 830- 850), 5( 870- 892), 6( 934- 957) | |||
| B - Tilt: 10 - TM segments: 1( 720- 739), 2( 767- 785), 3( 807- 823), 4( 830- 850), 5( 870- 892), 6( 934- 957) | |||
| C - Tilt: 10 - TM segments: 1( 720- 739), 2( 767- 785), 3( 807- 823), 4( 830- 850), 5( 870- 892), 6( 934- 957) | |||
| D - Tilt: 10 - TM segments: 1( 720- 739), 2( 767- 785), 3( 807- 823), 4( 830- 850), 5( 870- 892), 6( 934- 957) | |||