2gif >> Multidrug efflux transporter AcrB, asymmetric 1
Hydrophobic Thickness or Depth29.0 Å
Tilt Angle
ΔGtransfer-187.5 kcal/mol
Links to 2gifPDB Sum, PDB, MSD, MMDB, Encompass
Topologysubunit A (N terminus cytoplasmic side)
Resolution2.9
Primary PDB represention2gif
Other PDB entries representing this structure2dhh (2.8), 2dr6 (3.3), 2drd (3.1), 2hrt (3.0), 3aoa (3.35), 3aob (3.35), 3aoc (3.34), 3aod (3.3), 3w9h (3.05), 4zit (3.3), 4ziv (3.16), 4ziw (3.4), 4zjl (3.47), 4zjo (3.6), 4zjq (3.59), 5jmn (2.5), 5yil (3.0), 6q4n (2.8), 6q4o (2.8), 6q4p (2.8)
Number of TM secondary structures36
Membranome
UniprotACRB_ECOLI
Topology in Bacterial Gram-negative inner membrane
periplasm
cytoplasmic side
3D view in GLMol | LiteMol | Jmol | iCn3D

Comments: Residues 499-515 are ordered in 2gif and 2hrt but disordered in all other structures of AcrB. Three subunits are not identical. Therefore, their tilt angles and some transmembrane segments are slightly different. The substrate is bound to the stronger tilted subunit B.

Subunits: 3
A - Tilt: 2 - TM segments: 1(10-27),2(340-358),3(363-386),4(395-414),5(438-457),6(470-493),7(539-556),8(873-892),9(896-918),10(927-947),11(971-991),12(1003-1026)
B - Tilt: 6 - TM segments: 1(10-27),2(340-358),3(363-383),4(397-414),5(438-456),6(471-493),7(539-556),8(874-892),9(896-918),10(927-947),11(971-991),12(1003-1026)
C - Tilt: 3 - TM segments: 1(10-27),2(340-358),3(363-386),4(394-413),5(439-457),6(470-492),7(539-557),8(873-892),9(896-918),10(927-947),11(972-991),12(1002-1025)